Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RNU6-95P-201ENST00000384697 107 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 MIR517A-201ENST00000385001 87 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 SNORD89-201ENST00000390981 114 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 AC018865.2-201ENST00000423631 129 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 AC092423.1-201ENST00000430165 186 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 RPL23AP50-201ENST00000434149 455 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 AL162725.1-201ENST00000435405 301 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 RNU7-66P-201ENST00000459469 62 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 RNU6-496P-201ENST00000516145 99 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 RNU6-1110P-201ENST00000516462 101 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 AC109810.1-201ENST00000534066 224 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 AL158211.1-201ENST00000566763 763 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 AC023827.1-201ENST00000569247 97 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 7SK.10-201ENST00000621414 298 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 AC243829.3-201ENST00000622177 108 ntBASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.37□□□□□ -2.35
ZIC4Q8N9L1 RNU6-1085P-201ENST00000363576 107 ntBASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 RNU6-945P-201ENST00000383947 107 ntBASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 RNU6-1105P-201ENST00000384774 107 ntBASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 MIR452-201ENST00000385020 85 ntBASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 ZNF885P-201ENST00000420174 1098 ntBASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 AL590632.1-201ENST00000424289 371 ntBASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 MTCO1P19-201ENST00000443487 500 ntBASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 AC120024.3-201ENST00000603167 156 ntBASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 AC121247.2-201ENST00000604776 136 ntBASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 AC019193.3-201ENST00000609144 554 ntBASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 AC093913.1-201ENST00000614178 329 ntBASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 AC027279.3-201ENST00000625055 122 ntBASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
ZIC4Q8N9L1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 SNORA27.1-201ENST00000362604 124 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 Y_RNA.135-201ENST00000363439 95 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 RNU4-41P-201ENST00000364426 143 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 RNU6-1264P-201ENST00000383891 107 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 RNU6-342P-201ENST00000384521 104 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 RNU6-1067P-201ENST00000384752 107 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 MIR216A-201ENST00000385063 110 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 RNU5A-5P-201ENST00000411054 116 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 AC243428.1-201ENST00000421099 264 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 MTND2P9-201ENST00000422293 931 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 USMG5P1-201ENST00000425964 177 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 Z98949.2-201ENST00000440996 144 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 AC046134.1-201ENST00000514454 666 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 Y_RNA.665-201ENST00000516177 98 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 MTND4LP26-201ENST00000518144 282 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 ZNF519P2-201ENST00000557032 169 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 MIR5696-201ENST00000578474 85 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 AC119751.7-201ENST00000600494 245 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 AC124303.1-201ENST00000605703 360 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 AC092954.2-201ENST00000609103 430 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 AL138726.1-201ENST00000614873 333 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 AC007742.2-201ENST00000618226 398 ntBASIC0.35□□□□□ -2.35
ZIC4Q8N9L1 Y_RNA.112-201ENST00000363250 102 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 RNU6-117P-201ENST00000365415 107 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.359-201ENST00000365498 102 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.553-201ENST00000384670 102 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 MIR489-201ENST00000384923 84 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 RNU6-1068P-201ENST00000410958 103 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 AL137792.2-201ENST00000443484 235 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 RNU6-1114P-201ENST00000516022 107 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 RNU6-1116P-201ENST00000517269 99 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 AC011712.1-201ENST00000588959 234 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 AC127459.3-201ENST00000624328 466 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 AL008636.1-201ENST00000625038 1018 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 AC068137.3-201ENST00000639191 341 ntBASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
ZIC4Q8N9L1 AC073544.1-201ENST00000600110 1595 ntBASIC0.33□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.373-201ENST00000365600 103 ntBASIC0.33□□□□□ -2.36
ZIC4Q8N9L1 RNU1-119P-201ENST00000391122 165 ntBASIC0.33□□□□□ -2.36
ZIC4Q8N9L1 DEFB108C-201ENST00000400154 252 ntBASIC0.33□□□□□ -2.36
ZIC4Q8N9L1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.33□□□□□ -2.36
ZIC4Q8N9L1 MTCYBP10-201ENST00000424905 650 ntBASIC0.33□□□□□ -2.36
ZIC4Q8N9L1 MTATP6P13-201ENST00000438531 667 ntBASIC0.33□□□□□ -2.36
ZIC4Q8N9L1 RPS20P10-201ENST00000451209 253 ntBASIC0.33□□□□□ -2.36
ZIC4Q8N9L1 RNU6-1096P-201ENST00000517089 102 ntBASIC0.33□□□□□ -2.36
ZIC4Q8N9L1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.33□□□□□ -2.36
ZIC4Q8N9L1 MIR7111-201ENST00000619751 72 ntBASIC0.33□□□□□ -2.36
ZIC4Q8N9L1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
ZIC4Q8N9L1 SNORD114-23-201ENST00000363536 72 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 RNU6-281P-201ENST00000384212 103 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 MIR520C-201ENST00000385005 87 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms