Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 SNORA25.3-201ENST00000363205 127 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 MIR514A2-201ENST00000385131 88 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 MIR514A3-201ENST00000385132 88 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 AC018865.2-201ENST00000423631 129 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 MTCO2P12-201ENST00000427426 682 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 RNU6-261P-201ENST00000459506 102 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 AC083798.1-201ENST00000472671 131 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 CYCTP-201ENST00000504253 315 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 AC018710.1-201ENST00000506509 158 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 RNU6-107P-201ENST00000516643 102 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 AL358944.1-201ENST00000528537 144 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 AP001330.5-201ENST00000607176 411 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 AC010999.1-201ENST00000611856 324 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 AL136317.1-201ENST00000612653 226 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 AC027279.3-201ENST00000625055 122 ntBASIC0.24□□□□□ -2.37
CNEP1R1Q8N9A8 SNORA27.1-201ENST00000362604 124 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 RNU6-128P-201ENST00000383976 107 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 RNU6-1297P-201ENST00000384415 104 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 MRPS18CP6-201ENST00000423587 223 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 AC244023.1-201ENST00000426884 112 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 PCMTD1P1-201ENST00000455560 355 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 SNORA68.3-201ENST00000515906 83 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 RNU7-41P-201ENST00000515917 61 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 RN7SKP164-201ENST00000516138 266 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 AC036111.3-201ENST00000526389 112 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 AC120024.3-201ENST00000603167 156 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 AC073648.5-201ENST00000603502 305 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 AC242498.1-201ENST00000604134 111 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 AC243994.1-201ENST00000618627 109 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 AC100810.6-201ENST00000638068 285 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 AC134026.1-201ENST00000623249 2239 ntBASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CNEP1R1Q8N9A8 RNA5SP325-201ENST00000363756 130 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 RNU6-522P-201ENST00000364497 107 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 RNU6-407P-201ENST00000365280 104 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 RNU6-716P-201ENST00000365621 103 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 SNORA69-201ENST00000383895 132 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 RNY1P8-201ENST00000383970 114 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 SNORA36.2-201ENST00000384004 127 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 MIR452-201ENST00000385020 85 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 RNA5SP222-201ENST00000411039 105 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 PIGPP3-201ENST00000425307 415 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 AC067940.1-201ENST00000458411 300 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 RPS3AP17-201ENST00000472594 777 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 AC083904.1-201ENST00000487828 231 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 RNU6-1278P-201ENST00000516130 107 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 SNORA62.5-201ENST00000516634 120 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 AC134698.4-201ENST00000523451 826 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 AF235103.2-201ENST00000525753 346 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 MIR3684-201ENST00000579779 74 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 POLR3GP2-201ENST00000588366 668 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 AC087752.4-201ENST00000605911 462 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 MIR8087-201ENST00000612745 78 ntBASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CNEP1R1Q8N9A8 RNU6-222P-201ENST00000362438 107 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 RNU6-254P-201ENST00000363377 107 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 Y_RNA.296-201ENST00000364930 108 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 RNU6-117P-201ENST00000365415 107 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 SNORA75-201ENST00000384158 137 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 MIR520G-201ENST00000385064 90 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 SNORD105-201ENST00000386910 85 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 SNORD111-201ENST00000408139 94 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 RNU6-994P-201ENST00000410507 111 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 AL137792.2-201ENST00000443484 235 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 Y_RNA.683-201ENST00000516508 93 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 RNU6-1096P-201ENST00000517089 102 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 SNORA74.3-201ENST00000517108 154 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 AC023442.1-201ENST00000531247 422 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 AC097520.1-201ENST00000624435 385 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 AC008133.2-201ENST00000624540 351 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 MIR6516-201ENST00000630554 81 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 AC099654.12-201ENST00000639868 649 ntBASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
CNEP1R1Q8N9A8 AC073544.1-201ENST00000600110 1595 ntBASIC0.2□□□□□ -2.38
CNEP1R1Q8N9A8 MIR330-201ENST00000362196 94 ntBASIC0.2□□□□□ -2.38
CNEP1R1Q8N9A8 RNU6-95P-201ENST00000384697 107 ntBASIC0.2□□□□□ -2.38
CNEP1R1Q8N9A8 MIR520C-201ENST00000385005 87 ntBASIC0.2□□□□□ -2.38
CNEP1R1Q8N9A8 MTCYBP4-201ENST00000401524 249 ntBASIC0.2□□□□□ -2.38
CNEP1R1Q8N9A8 MIR1827-201ENST00000408549 66 ntBASIC0.2□□□□□ -2.38
CNEP1R1Q8N9A8 MIR1298-201ENST00000408783 112 ntBASIC0.2□□□□□ -2.38
CNEP1R1Q8N9A8 RNU6-648P-201ENST00000410190 107 ntBASIC0.2□□□□□ -2.38
CNEP1R1Q8N9A8 RNU4-55P-201ENST00000410731 137 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms