Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC024995.1-201ENST00000523014 93 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 AC015712.3-201ENST00000559380 164 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 AC069114.2-201ENST00000604699 304 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 U6.73-201ENST00000619194 103 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
BEST3Q8N1M1 SNORD113-8-201ENST00000363497 74 ntBASIC1.84□□□□□ -2.11
BEST3Q8N1M1 RNU6-324P-201ENST00000363957 106 ntBASIC1.84□□□□□ -2.11
BEST3Q8N1M1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
BEST3Q8N1M1 AL031003.1-201ENST00000404229 172 ntBASIC1.84□□□□□ -2.11
BEST3Q8N1M1 AL355497.1-201ENST00000406262 551 ntBASIC1.84□□□□□ -2.11
BEST3Q8N1M1 AC096920.1-201ENST00000423991 241 ntBASIC1.84□□□□□ -2.11
BEST3Q8N1M1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
BEST3Q8N1M1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.84□□□□□ -2.11
BEST3Q8N1M1 MRPS10P1-201ENST00000448483 130 ntBASIC1.84□□□□□ -2.11
BEST3Q8N1M1 RNVU1-2-201ENST00000516326 135 ntBASIC1.84□□□□□ -2.11
BEST3Q8N1M1 RNU6-295P-201ENST00000516901 104 ntBASIC1.84□□□□□ -2.11
BEST3Q8N1M1 AC027419.1-201ENST00000522976 328 ntBASIC1.84□□□□□ -2.11
BEST3Q8N1M1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.84□□□□□ -2.11
BEST3Q8N1M1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.84□□□□□ -2.11
BEST3Q8N1M1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.84□□□□□ -2.11
BEST3Q8N1M1 MIR5094-201ENST00000578766 85 ntBASIC1.84□□□□□ -2.11
BEST3Q8N1M1 MIR4448-201ENST00000584360 86 ntBASIC1.84□□□□□ -2.11
BEST3Q8N1M1 AC002984.1-201ENST00000591692 448 ntBASIC1.84□□□□□ -2.11
BEST3Q8N1M1 AL359075.3-201ENST00000613288 217 ntBASIC1.84□□□□□ -2.11
BEST3Q8N1M1 ZNF702P-202ENST00000434269 1966 ntBASIC1.84□□□□□ -2.11
BEST3Q8N1M1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
BEST3Q8N1M1 Y_RNA.105-201ENST00000363182 111 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 RNU6-1019P-201ENST00000364424 107 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 RNU6-407P-201ENST00000365280 104 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 U8.13-201ENST00000390842 128 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 RNA5SP467-201ENST00000391274 118 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 AC019129.1-201ENST00000403786 261 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 RNU4-30P-201ENST00000410245 143 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 RNU6-121P-201ENST00000410525 99 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 MTATP8P1-201ENST00000467115 207 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.83□□□□□ -2.12
BEST3Q8N1M1 HMGB3P17-201ENST00000504195 649 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 RNA5SP20-201ENST00000515976 84 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 RNU6-237P-201ENST00000515985 71 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 RNU6-436P-201ENST00000516171 114 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 RNU6-966P-201ENST00000516479 104 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 RNU1-142P-201ENST00000516682 145 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 AC023157.2-201ENST00000540596 141 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.83□□□□□ -2.12
BEST3Q8N1M1 AL117187.1-201ENST00000555482 181 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 MIR3935-201ENST00000583472 104 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 MIR4438-201ENST00000585271 93 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.83□□□□□ -2.12
BEST3Q8N1M1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
BEST3Q8N1M1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
BEST3Q8N1M1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.83□□□□□ -2.12
BEST3Q8N1M1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
BEST3Q8N1M1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.83□□□□□ -2.12
BEST3Q8N1M1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
BEST3Q8N1M1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.82□□□□□ -2.12
BEST3Q8N1M1 RNU4-90P-201ENST00000362773 141 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 Y_RNA.64-201ENST00000362845 102 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 RNA5SP160-201ENST00000364866 120 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 MIR583-201ENST00000384846 75 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 RNA5SP323-201ENST00000391094 133 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 AL512604.1-201ENST00000404812 257 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 MIR548F4-201ENST00000408515 105 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 Y_RNA.602-201ENST00000410535 92 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 AL158823.1-201ENST00000418441 478 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 AC069257.2-201ENST00000441819 155 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 RPS27P21-201ENST00000486977 252 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 RNU7-99P-201ENST00000516271 62 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 RNU6-635P-201ENST00000516651 102 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 AP003733.2-201ENST00000529409 171 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.82□□□□□ -2.12
BEST3Q8N1M1 SUB1P4-201ENST00000566062 339 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 SNRPGP19-201ENST00000603826 189 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 uc_338.20-201ENST00000621563 178 ntBASIC1.82□□□□□ -2.12
BEST3Q8N1M1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.82□□□□□ -2.12
BEST3Q8N1M1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
BEST3Q8N1M1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
BEST3Q8N1M1 AC010615.1-201ENST00000594254 1764 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 RNA5SP276-201ENST00000362580 94 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 SNORD81.1-201ENST00000363064 77 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 RNU6-806P-201ENST00000365147 105 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 Y_RNA.329-201ENST00000365209 107 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 Y_RNA.581-201ENST00000391017 97 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 RNU11-5P-201ENST00000391216 129 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 RNA5SP212-201ENST00000391223 107 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 RNU6-710P-201ENST00000410424 105 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 RNU6-1186P-201ENST00000410429 97 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 RNU2-40P-201ENST00000410833 196 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 AL445685.2-201ENST00000422551 342 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 AL358176.2-201ENST00000425769 204 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 AC024067.1-201ENST00000426199 223 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 RPS26P55-201ENST00000471178 356 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.81□□□□□ -2.12
BEST3Q8N1M1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.81□□□□□ -2.12
BEST3Q8N1M1 RNU6-496P-201ENST00000516145 99 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 RNU6-548P-201ENST00000517083 115 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.81□□□□□ -2.12
BEST3Q8N1M1 AC008269.2-201ENST00000561915 1105 ntBASIC1.81□□□□□ -2.12
BEST3Q8N1M1 MIR6845-201ENST00000613182 61 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms