Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC005042.3-201ENST00000453230 174 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 SNORD65B-201ENST00000459126 73 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 RNA5SP182-201ENST00000516064 82 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 RNU6-496P-201ENST00000516145 99 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 AP003733.2-201ENST00000529409 171 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.15□□□□□ -2.07
VPS52Q8N1B4 AC008269.2-201ENST00000561915 1105 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 AC008749.1-201ENST00000597650 306 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 SNORD113-5-201ENST00000607261 78 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 AC011373.1-201ENST00000607270 237 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 AC006435.5-201ENST00000624486 112 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 AL159152.1-201ENST00000635019 2587 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VPS52Q8N1B4 SNORD114-7-201ENST00000362520 77 ntBASIC2.14□□□□□ -2.07
VPS52Q8N1B4 RNU1-17P-201ENST00000363022 152 ntBASIC2.14□□□□□ -2.07
VPS52Q8N1B4 SNORD115-3-201ENST00000363100 82 ntBASIC2.14□□□□□ -2.07
VPS52Q8N1B4 RNU6-23P-201ENST00000363283 107 ntBASIC2.14□□□□□ -2.07
VPS52Q8N1B4 SNORD113-8-201ENST00000363497 74 ntBASIC2.14□□□□□ -2.07
VPS52Q8N1B4 Y_RNA.176-201ENST00000363815 109 ntBASIC2.14□□□□□ -2.07
VPS52Q8N1B4 Y_RNA.222-201ENST00000364264 102 ntBASIC2.14□□□□□ -2.07
VPS52Q8N1B4 AL117342.1-201ENST00000404861 406 ntBASIC2.14□□□□□ -2.07
VPS52Q8N1B4 RPL23AP36-201ENST00000413895 458 ntBASIC2.14□□□□□ -2.07
VPS52Q8N1B4 RPL21P38-201ENST00000418090 167 ntBASIC2.14□□□□□ -2.07
VPS52Q8N1B4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.14□□□□□ -2.07
VPS52Q8N1B4 SEPT14P8-201ENST00000508026 178 ntBASIC2.14□□□□□ -2.07
VPS52Q8N1B4 AC011406.1-201ENST00000512440 370 ntBASIC2.14□□□□□ -2.07
VPS52Q8N1B4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS52Q8N1B4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS52Q8N1B4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS52Q8N1B4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.14□□□□□ -2.07
VPS52Q8N1B4 AC110588.1-201ENST00000559699 137 ntBASIC2.14□□□□□ -2.07
VPS52Q8N1B4 AC022513.1-201ENST00000624512 117 ntBASIC2.14□□□□□ -2.07
VPS52Q8N1B4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS52Q8N1B4 Y_RNA.47-201ENST00000362697 108 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 RNU6-1266P-201ENST00000362794 105 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 snoU2_19.2-201ENST00000363024 80 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 SNORD81.1-201ENST00000363064 77 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 Y_RNA.149-201ENST00000363558 117 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 Y_RNA.331-201ENST00000365267 102 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 AL355796.1-201ENST00000406706 323 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 HSPE1P25-201ENST00000455484 251 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 AC098869.1-201ENST00000481627 292 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 AC010598.1-201ENST00000510378 103 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 RNU6-155P-201ENST00000516347 100 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 RNU7-110P-201ENST00000516891 62 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 AC006380.1-201ENST00000603598 186 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 AC006001.4-201ENST00000622243 395 ntBASIC2.13□□□□□ -2.07
VPS52Q8N1B4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
VPS52Q8N1B4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS52Q8N1B4 snoU2-30.2-201ENST00000362805 70 ntBASIC2.12□□□□□ -2.07
VPS52Q8N1B4 Y_RNA.286-201ENST00000364813 102 ntBASIC2.12□□□□□ -2.07
VPS52Q8N1B4 RNA5SP160-201ENST00000364866 120 ntBASIC2.12□□□□□ -2.07
VPS52Q8N1B4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS52Q8N1B4 SNORA20B-201ENST00000384220 132 ntBASIC2.12□□□□□ -2.07
VPS52Q8N1B4 RNU6-102P-201ENST00000384485 104 ntBASIC2.12□□□□□ -2.07
VPS52Q8N1B4 MIR568-201ENST00000385036 95 ntBASIC2.12□□□□□ -2.07
VPS52Q8N1B4 RNU4-30P-201ENST00000410245 143 ntBASIC2.12□□□□□ -2.07
VPS52Q8N1B4 RNU2-40P-201ENST00000410833 196 ntBASIC2.12□□□□□ -2.07
VPS52Q8N1B4 AL445685.2-201ENST00000422551 342 ntBASIC2.12□□□□□ -2.07
VPS52Q8N1B4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS52Q8N1B4 HMGN2P34-201ENST00000437647 269 ntBASIC2.12□□□□□ -2.07
VPS52Q8N1B4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
VPS52Q8N1B4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS52Q8N1B4 HMGB3P17-201ENST00000504195 649 ntBASIC2.12□□□□□ -2.07
VPS52Q8N1B4 AC005786.1-201ENST00000588553 154 ntBASIC2.12□□□□□ -2.07
VPS52Q8N1B4 MIR8062-201ENST00000621515 85 ntBASIC2.12□□□□□ -2.07
VPS52Q8N1B4 MIR338-201ENST00000636369 67 ntBASIC2.12□□□□□ -2.07
VPS52Q8N1B4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
VPS52Q8N1B4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VPS52Q8N1B4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS52Q8N1B4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
VPS52Q8N1B4 RNU4-90P-201ENST00000362773 141 ntBASIC2.11□□□□□ -2.07
VPS52Q8N1B4 Y_RNA.287-201ENST00000364853 94 ntBASIC2.11□□□□□ -2.07
VPS52Q8N1B4 Y_RNA.512-201ENST00000384518 102 ntBASIC2.11□□□□□ -2.07
VPS52Q8N1B4 Y_RNA.518-201ENST00000384552 113 ntBASIC2.11□□□□□ -2.07
VPS52Q8N1B4 RNU6-21P-201ENST00000384710 107 ntBASIC2.11□□□□□ -2.07
VPS52Q8N1B4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
VPS52Q8N1B4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS52Q8N1B4 HMGN1P10-201ENST00000474557 553 ntBASIC2.11□□□□□ -2.07
VPS52Q8N1B4 RNU6-1146P-201ENST00000516282 102 ntBASIC2.11□□□□□ -2.07
VPS52Q8N1B4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS52Q8N1B4 AL161670.1-201ENST00000554348 137 ntBASIC2.11□□□□□ -2.07
VPS52Q8N1B4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.11□□□□□ -2.07
VPS52Q8N1B4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS52Q8N1B4 MIR3935-201ENST00000583472 104 ntBASIC2.11□□□□□ -2.07
VPS52Q8N1B4 AP000942.3-201ENST00000603702 160 ntBASIC2.11□□□□□ -2.07
VPS52Q8N1B4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VPS52Q8N1B4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
VPS52Q8N1B4 SNORA27.1-201ENST00000362604 124 ntBASIC2.1□□□□□ -2.07
VPS52Q8N1B4 RNU6-713P-201ENST00000384761 107 ntBASIC2.1□□□□□ -2.07
VPS52Q8N1B4 MIR215-201ENST00000384858 110 ntBASIC2.1□□□□□ -2.07
VPS52Q8N1B4 MIR873-201ENST00000401120 77 ntBASIC2.1□□□□□ -2.07
VPS52Q8N1B4 AL031003.1-201ENST00000404229 172 ntBASIC2.1□□□□□ -2.07
VPS52Q8N1B4 RNU2-61P-201ENST00000411069 191 ntBASIC2.1□□□□□ -2.07
VPS52Q8N1B4 MTND2P29-201ENST00000438595 412 ntBASIC2.1□□□□□ -2.07
VPS52Q8N1B4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS52Q8N1B4 RPL23AP63-201ENST00000498752 471 ntBASIC2.1□□□□□ -2.07
VPS52Q8N1B4 RNU6-436P-201ENST00000516171 114 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms