Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC236972.2-201ENST00000434979 310 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 RNU1-123P-201ENST00000458950 160 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 RNU7-152P-201ENST00000458982 64 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 AC004223.1-201ENST00000479840 271 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 AC097462.1-201ENST00000514125 324 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 AL442163.3-201ENST00000554110 156 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 snoU13.31-201ENST00000607291 104 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 Y_RNA.804-201ENST00000615262 101 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 U6.115-201ENST00000636045 103 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-271P-201ENST00000363858 105 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 Y_RNA.463-201ENST00000384271 102 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 RNY3P4-201ENST00000384428 101 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 MRPL42P3-201ENST00000401492 326 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 AL161935.2-201ENST00000414627 60 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 MTCO3P19-201ENST00000415864 321 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 AC096644.2-201ENST00000429278 159 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 FCF1P4-201ENST00000448326 183 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 RNU7-94P-201ENST00000459576 63 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 RNA5SP20-201ENST00000515976 84 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 SNORA31.10-201ENST00000516482 106 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 RNU7-172P-201ENST00000517125 64 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 MIR4422-201ENST00000581938 83 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 AC073413.2-201ENST00000604332 360 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 MIR8054-201ENST00000620877 86 ntBASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
C9orf40Q8IXQ3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 SNORA27.1-201ENST00000362604 124 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 Y_RNA.58-201ENST00000362807 102 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 RNU1-22P-201ENST00000363334 158 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 Y_RNA.146-201ENST00000363549 102 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 Y_RNA.154-201ENST00000363624 102 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-961P-201ENST00000363893 105 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 RNY3P1-201ENST00000365085 102 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 RNY3-201ENST00000365484 102 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 Y_RNA.428-201ENST00000384078 102 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 MIR194-1-201ENST00000384892 85 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-440P-201ENST00000390882 105 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 RN7SKP200-201ENST00000410564 320 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 AC018865.2-201ENST00000423631 129 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 RPS29P29-201ENST00000456396 171 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-911P-201ENST00000516523 104 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 SNORD116.3-201ENST00000517176 78 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 AC138305.3-201ENST00000624988 240 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 AC018630.2-201ENST00000534866 2403 ntBASIC1.22□□□□□ -2.21
C9orf40Q8IXQ3 MIR302D-201ENST00000362275 68 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 SNORD1A-201ENST00000364968 72 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 SNORD78.2-201ENST00000391076 69 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 RNU11-5P-201ENST00000391216 129 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 RNU1-78P-201ENST00000391248 165 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 AC004965.1-201ENST00000413033 213 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 RPS29P23-201ENST00000458635 123 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 RPS26P55-201ENST00000471178 356 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 AC099513.1-201ENST00000490423 301 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 MTND3P22-201ENST00000510932 243 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 AC023442.1-201ENST00000531247 422 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 RPL21P9-201ENST00000556149 474 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 MIR4498-201ENST00000577599 66 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 AC004467.1-201ENST00000615678 330 ntBASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
C9orf40Q8IXQ3 RNU6-1115P-201ENST00000362490 106 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 Y_RNA.243-201ENST00000364481 109 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 MIR873-201ENST00000401120 77 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 AC015922.2-201ENST00000435593 184 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 MTATP6P23-201ENST00000440153 476 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 SUMO1P2-201ENST00000452524 304 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 AC079140.2-201ENST00000506193 142 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 RNU6-1012P-201ENST00000516606 109 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 AC006600.1-201ENST00000572529 153 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 AC015688.6-201ENST00000577737 104 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 MIR4795-201ENST00000584182 89 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 VN1R91P-201ENST00000594377 169 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 AC005828.6-201ENST00000606610 232 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 AC021506.2-201ENST00000612354 169 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 MIR6079-201ENST00000635807 62 ntBASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
C9orf40Q8IXQ3 AL161722.3-201ENST00000605789 2983 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 AL391987.6-201ENST00000305671 199 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms