Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 PIGPP3-201ENST00000425307 415 ntBASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 AL591806.2-201ENST00000433122 173 ntBASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 RPS12P2-201ENST00000439728 269 ntBASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 RPL23AP7-203ENST00000449021 469 ntBASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 SNORD2.1-201ENST00000458762 69 ntBASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 Y_RNA.637-201ENST00000459424 114 ntBASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 AC010409.1-201ENST00000487382 476 ntBASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 RNY3P16-201ENST00000516338 101 ntBASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 RNU2-34P-201ENST00000516534 121 ntBASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 SNORA81.3-201ENST00000517283 198 ntBASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 MIR3684-201ENST00000579779 74 ntBASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 AC011921.3-201ENST00000605540 361 ntBASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 AC073349.3-201ENST00000617616 186 ntBASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 AL449363.1-201ENST00000617815 186 ntBASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SFTPA1Q8IWL2 MIR411-201ENST00000362239 96 ntBASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 Y_RNA.150-201ENST00000363562 102 ntBASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 MIR1262-201ENST00000408276 93 ntBASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 AL357134.1-201ENST00000445848 426 ntBASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 SUMO1P2-201ENST00000452524 304 ntBASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 RNA5SP20-201ENST00000515976 84 ntBASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 RNU6-237P-201ENST00000515985 71 ntBASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 AC136628.3-201ENST00000521868 290 ntBASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 U4atac.1-201ENST00000618345 95 ntBASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 Z82195.2-201ENST00000612348 18351 ntBASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SFTPA1Q8IWL2 Y_RNA.310-201ENST00000365063 113 ntBASIC2.28□□□□□ -2.04
SFTPA1Q8IWL2 U8.9-201ENST00000365667 134 ntBASIC2.28□□□□□ -2.04
SFTPA1Q8IWL2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.28□□□□□ -2.04
SFTPA1Q8IWL2 RNU6-443P-201ENST00000384780 107 ntBASIC2.28□□□□□ -2.04
SFTPA1Q8IWL2 MTCO2P33-201ENST00000402100 465 ntBASIC2.28□□□□□ -2.04
SFTPA1Q8IWL2 SRIP3-201ENST00000413200 219 ntBASIC2.28□□□□□ -2.04
SFTPA1Q8IWL2 AC060773.1-201ENST00000421698 310 ntBASIC2.28□□□□□ -2.04
SFTPA1Q8IWL2 RPS27P22-201ENST00000478056 241 ntBASIC2.28□□□□□ -2.04
SFTPA1Q8IWL2 RNU6-1337P-201ENST00000516525 95 ntBASIC2.28□□□□□ -2.04
SFTPA1Q8IWL2 RNU6-63P-201ENST00000516690 95 ntBASIC2.28□□□□□ -2.04
SFTPA1Q8IWL2 RNU6-826P-201ENST00000516827 104 ntBASIC2.28□□□□□ -2.04
SFTPA1Q8IWL2 NDUFA5P6-201ENST00000542110 379 ntBASIC2.28□□□□□ -2.04
SFTPA1Q8IWL2 AC022202.1-201ENST00000613515 211 ntBASIC2.28□□□□□ -2.04
SFTPA1Q8IWL2 AL356292.1-201ENST00000283110 373 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 Y_RNA.29-201ENST00000362570 113 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 SNORD115-3-201ENST00000363100 82 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 RNU6-271P-201ENST00000363858 105 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 SNORD114-6-201ENST00000364393 72 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 RNU6-923P-201ENST00000364753 107 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 Y_RNA.308-201ENST00000365043 101 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 Y_RNA.368-201ENST00000365547 113 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 MIR1253-201ENST00000408273 105 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 Y_RNA.793-201ENST00000411222 111 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 AL138752.1-201ENST00000452964 351 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 Y_RNA.644-201ENST00000459006 113 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 RPS26P55-201ENST00000471178 356 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 Y_RNA.674-201ENST00000516362 113 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 RNU6-856P-201ENST00000516959 98 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 RNU6-182P-201ENST00000516970 105 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 AC004792.1-201ENST00000614523 137 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 MIR6766-201ENST00000622641 72 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 AC009487.4-201ENST00000624969 3585 ntBASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.27□□□□□ -2.05
SFTPA1Q8IWL2 AL159152.1-201ENST00000635019 2587 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 Y_RNA.287-201ENST00000364853 94 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 RNU6-47P-201ENST00000383866 107 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 SNORA72.4-201ENST00000384174 132 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 Y_RNA.456-201ENST00000384232 111 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 Y_RNA.785-201ENST00000384290 109 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 SNORD116-13-201ENST00000384408 92 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 HMGN2P34-201ENST00000437647 269 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 HSPE1P21-201ENST00000438283 308 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 SUMO1P3-201ENST00000439961 304 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 RPS20P10-201ENST00000451209 253 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 AC022559.1-201ENST00000520905 205 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 MIR4658-201ENST00000584344 65 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 AL365265.1-201ENST00000621045 234 ntBASIC2.26□□□□□ -2.05
SFTPA1Q8IWL2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.25□□□□□ -2.05
SFTPA1Q8IWL2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SFTPA1Q8IWL2 SNORA38-201ENST00000363946 132 ntBASIC2.25□□□□□ -2.05
SFTPA1Q8IWL2 RNA5SP99-201ENST00000364020 114 ntBASIC2.25□□□□□ -2.05
SFTPA1Q8IWL2 SNORA25.6-201ENST00000364121 118 ntBASIC2.25□□□□□ -2.05
SFTPA1Q8IWL2 RNU6-136P-201ENST00000384663 107 ntBASIC2.25□□□□□ -2.05
SFTPA1Q8IWL2 RNU6-493P-201ENST00000391321 108 ntBASIC2.25□□□□□ -2.05
SFTPA1Q8IWL2 RNA5SP492-201ENST00000411330 114 ntBASIC2.25□□□□□ -2.05
SFTPA1Q8IWL2 snoU13.23-201ENST00000458863 104 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 217 ms