Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 MIR1185-2-201ENST00000408687 86 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 Y_RNA.605-201ENST00000410577 105 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 ELOCP21-201ENST00000412558 336 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 UBE2V1P7-201ENST00000446395 340 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 UQCRBP2-201ENST00000447827 297 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 AC074290.1-201ENST00000448883 135 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 RNU6-221P-201ENST00000459541 99 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 AC027575.1-201ENST00000481064 460 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.66□□□□□ -2.14
NPHP3Q7Z494 C8orf59P2-201ENST00000603441 271 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 AC016925.2-201ENST00000605108 242 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 MIR338-201ENST00000636369 67 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.66□□□□□ -2.14
NPHP3Q7Z494 MIR126-201ENST00000362291 85 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 RNU6-1115P-201ENST00000362490 106 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 RNU6-112P-201ENST00000363599 104 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 RNU6-708P-201ENST00000384217 107 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 Y_RNA.509-201ENST00000384506 99 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 RNU6-417P-201ENST00000384712 107 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 MTND4P28-201ENST00000426217 387 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 HMGN2P34-201ENST00000437647 269 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.66□□□□□ -2.14
NPHP3Q7Z494 RN7SKP49-201ENST00000516675 260 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 HSBP1P1-201ENST00000555205 166 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 AL133255.1-201ENST00000606374 441 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 AC138305.3-201ENST00000624988 240 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 RNU1-96P-201ENST00000364163 162 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 RNU4-42P-201ENST00000364738 142 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 Y_RNA.287-201ENST00000364853 94 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 RNU6-926P-201ENST00000384075 107 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 MIR758-201ENST00000390227 88 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 MIR934-201ENST00000401241 83 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 SNORD12B-201ENST00000410433 91 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.65□□□□□ -2.15
NPHP3Q7Z494 PCNPP5-201ENST00000452246 481 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 NDUFB4P10-201ENST00000452541 359 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 AC112492.4-201ENST00000456549 352 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 AC093852.1-201ENST00000503587 266 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 Y_RNA.661-201ENST00000516003 99 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 RNU7-4P-201ENST00000516961 62 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 AC144568.1-201ENST00000520139 137 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 AC068338.1-201ENST00000565567 176 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.65□□□□□ -2.15
NPHP3Q7Z494 MIR8074-201ENST00000615081 81 ntBASIC1.65□□□□□ -2.15
NPHP3Q7Z494 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
NPHP3Q7Z494 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
NPHP3Q7Z494 Y_RNA.5-201ENST00000362334 102 ntBASIC1.64□□□□□ -2.15
NPHP3Q7Z494 snoU2-30.2-201ENST00000362805 70 ntBASIC1.64□□□□□ -2.15
NPHP3Q7Z494 RNA5SP467-201ENST00000391274 118 ntBASIC1.64□□□□□ -2.15
NPHP3Q7Z494 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.64□□□□□ -2.15
NPHP3Q7Z494 AC005908.1-201ENST00000468701 347 ntBASIC1.64□□□□□ -2.15
NPHP3Q7Z494 HMGN1P13-201ENST00000505795 138 ntBASIC1.64□□□□□ -2.15
NPHP3Q7Z494 AC025465.3-201ENST00000510570 311 ntBASIC1.64□□□□□ -2.15
NPHP3Q7Z494 RNU6-113P-201ENST00000516653 101 ntBASIC1.64□□□□□ -2.15
NPHP3Q7Z494 AP002001.1-203ENST00000534002 267 ntBASIC1.64□□□□□ -2.15
NPHP3Q7Z494 AC018448.1-201ENST00000552843 316 ntBASIC1.64□□□□□ -2.15
NPHP3Q7Z494 AC069114.2-201ENST00000604699 304 ntBASIC1.64□□□□□ -2.15
NPHP3Q7Z494 MIR7974-201ENST00000615835 79 ntBASIC1.64□□□□□ -2.15
NPHP3Q7Z494 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.63□□□□□ -2.15
NPHP3Q7Z494 RNU6-414P-201ENST00000363705 104 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 RNU6-1240P-201ENST00000365155 104 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 Y_RNA.428-201ENST00000384078 102 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 Y_RNA.498-201ENST00000384460 102 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 MIR1253-201ENST00000408273 105 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 RNU2-7P-201ENST00000410794 178 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 AC022028.1-201ENST00000412054 408 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.63□□□□□ -2.15
NPHP3Q7Z494 AC245047.4-201ENST00000433189 144 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 AC099799.1-201ENST00000439809 192 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 SNORA40.9-201ENST00000515895 93 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 SNORD116.3-201ENST00000517176 78 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 AC027419.1-201ENST00000522976 328 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.63□□□□□ -2.15
NPHP3Q7Z494 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.63□□□□□ -2.15
NPHP3Q7Z494 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.63□□□□□ -2.15
NPHP3Q7Z494 AL353149.1-201ENST00000610667 244 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 U2.1-201ENST00000618978 145 ntBASIC1.63□□□□□ -2.15
NPHP3Q7Z494 MIR369-201ENST00000362155 70 ntBASIC1.62□□□□□ -2.15
NPHP3Q7Z494 Y_RNA.80-201ENST00000362996 102 ntBASIC1.62□□□□□ -2.15
NPHP3Q7Z494 Y_RNA.813-201ENST00000364639 102 ntBASIC1.62□□□□□ -2.15
NPHP3Q7Z494 RNU6-338P-201ENST00000383888 105 ntBASIC1.62□□□□□ -2.15
NPHP3Q7Z494 Y_RNA.485-201ENST00000384395 102 ntBASIC1.62□□□□□ -2.15
NPHP3Q7Z494 RNU6-296P-201ENST00000384608 107 ntBASIC1.62□□□□□ -2.15
NPHP3Q7Z494 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.62□□□□□ -2.15
NPHP3Q7Z494 AC087343.1-201ENST00000477341 475 ntBASIC1.62□□□□□ -2.15
NPHP3Q7Z494 MIR2355-201ENST00000517199 87 ntBASIC1.62□□□□□ -2.15
NPHP3Q7Z494 MIR4295-201ENST00000585286 85 ntBASIC1.62□□□□□ -2.15
NPHP3Q7Z494 AC092447.9-201ENST00000603395 144 ntBASIC1.62□□□□□ -2.15
NPHP3Q7Z494 AL080274.1-201ENST00000605565 220 ntBASIC1.62□□□□□ -2.15
NPHP3Q7Z494 AL050343.2-201ENST00000607338 280 ntBASIC1.62□□□□□ -2.15
NPHP3Q7Z494 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.62□□□□□ -2.15
NPHP3Q7Z494 AC091925.1-201ENST00000623204 462 ntBASIC1.62□□□□□ -2.15
NPHP3Q7Z494 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.62□□□□□ -2.15
NPHP3Q7Z494 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
NPHP3Q7Z494 RNU6-961P-201ENST00000363893 105 ntBASIC1.61□□□□□ -2.15
NPHP3Q7Z494 AC008134.1-201ENST00000420943 193 ntBASIC1.61□□□□□ -2.15
NPHP3Q7Z494 SNORD65B-201ENST00000459126 73 ntBASIC1.61□□□□□ -2.15
NPHP3Q7Z494 RNU6-625P-201ENST00000459412 107 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms