Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RNA5SP450-201ENST00000411206 102 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 RPS27P22-201ENST00000478056 241 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 MIR514B-201ENST00000516774 80 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 RNU1-40P-201ENST00000516816 164 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 RNU1-97P-201ENST00000516872 164 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.92□□□□□ -2.1
SHFQ7M4L6 AL137100.2-201ENST00000555786 315 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 MIR3162-201ENST00000581818 82 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 MIR4438-201ENST00000585271 93 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 U6.73-201ENST00000619194 103 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.92□□□□□ -2.1
SHFQ7M4L6 AC245060.5-201ENST00000610778 3293 ntBASIC1.91□□□□□ -2.1
SHFQ7M4L6 Y_RNA.172-201ENST00000363765 102 ntBASIC1.91□□□□□ -2.1
SHFQ7M4L6 AL355497.1-201ENST00000406262 551 ntBASIC1.91□□□□□ -2.1
SHFQ7M4L6 SNORD23.1-201ENST00000408212 104 ntBASIC1.91□□□□□ -2.1
SHFQ7M4L6 AL135790.2-201ENST00000437701 267 ntBASIC1.91□□□□□ -2.1
SHFQ7M4L6 RNU6-1132P-201ENST00000459214 107 ntBASIC1.91□□□□□ -2.1
SHFQ7M4L6 AC025033.1-201ENST00000463883 194 ntBASIC1.91□□□□□ -2.1
SHFQ7M4L6 SNORA70.12-201ENST00000516084 153 ntBASIC1.91□□□□□ -2.1
SHFQ7M4L6 RNU6-191P-201ENST00000516295 94 ntBASIC1.91□□□□□ -2.1
SHFQ7M4L6 RNU7-128P-201ENST00000517247 62 ntBASIC1.91□□□□□ -2.1
SHFQ7M4L6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.91□□□□□ -2.1
SHFQ7M4L6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.91□□□□□ -2.1
SHFQ7M4L6 RPL21P9-201ENST00000556149 474 ntBASIC1.91□□□□□ -2.1
SHFQ7M4L6 AC012433.1-201ENST00000588916 398 ntBASIC1.91□□□□□ -2.1
SHFQ7M4L6 AC062037.2-201ENST00000610137 73 ntBASIC1.91□□□□□ -2.1
SHFQ7M4L6 U6.108-201ENST00000637764 58 ntBASIC1.91□□□□□ -2.1
SHFQ7M4L6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SHFQ7M4L6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.91□□□□□ -2.1
SHFQ7M4L6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
SHFQ7M4L6 RNA5SP289-201ENST00000362332 137 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 Y_RNA.14-201ENST00000362415 103 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 RNU1-22P-201ENST00000363334 158 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 RNU1-96P-201ENST00000364163 162 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 Y_RNA.562-201ENST00000384695 113 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SHFQ7M4L6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.9□□□□□ -2.11
SHFQ7M4L6 CST2P1-201ENST00000425770 87 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 AC010409.1-201ENST00000487382 476 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 AC091959.1-201ENST00000495857 238 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 AC097462.1-201ENST00000514125 324 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 RNU6-1337P-201ENST00000516525 95 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 SCARNA16.3-201ENST00000516595 184 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 RNU2-19P-201ENST00000517288 84 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.9□□□□□ -2.11
SHFQ7M4L6 MIR4529-201ENST00000578110 78 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 AC037487.3-201ENST00000606668 112 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 AC012640.5-201ENST00000623897 319 ntBASIC1.9□□□□□ -2.11
SHFQ7M4L6 AL136360.1-201ENST00000503377 1900 ntBASIC1.89□□□□□ -2.11
SHFQ7M4L6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.89□□□□□ -2.11
SHFQ7M4L6 AL356292.1-201ENST00000283110 373 ntBASIC1.89□□□□□ -2.11
SHFQ7M4L6 SNORA25.1-201ENST00000362326 128 ntBASIC1.89□□□□□ -2.11
SHFQ7M4L6 RNU6-525P-201ENST00000363685 104 ntBASIC1.89□□□□□ -2.11
SHFQ7M4L6 RNU6-117P-201ENST00000365415 107 ntBASIC1.89□□□□□ -2.11
SHFQ7M4L6 SNORD116-13-201ENST00000384408 92 ntBASIC1.89□□□□□ -2.11
SHFQ7M4L6 EBAG9P1-201ENST00000418955 543 ntBASIC1.89□□□□□ -2.11
SHFQ7M4L6 HSPE1P13-201ENST00000451143 297 ntBASIC1.89□□□□□ -2.11
SHFQ7M4L6 AC055731.1-201ENST00000474387 401 ntBASIC1.89□□□□□ -2.11
SHFQ7M4L6 MTND1P19-201ENST00000511780 315 ntBASIC1.89□□□□□ -2.11
SHFQ7M4L6 RNVU1-2-201ENST00000516326 135 ntBASIC1.89□□□□□ -2.11
SHFQ7M4L6 RNU6-63P-201ENST00000516690 95 ntBASIC1.89□□□□□ -2.11
SHFQ7M4L6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.89□□□□□ -2.11
SHFQ7M4L6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SHFQ7M4L6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SHFQ7M4L6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SHFQ7M4L6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SHFQ7M4L6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SHFQ7M4L6 SNORA48.1-201ENST00000390879 135 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 NDUFB4P4-201ENST00000404822 243 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 RNU6-855P-201ENST00000410395 104 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 RNU6-710P-201ENST00000410424 105 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 RNU6-1186P-201ENST00000410429 97 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 RNA5SP501-201ENST00000410990 112 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.88□□□□□ -2.11
SHFQ7M4L6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.88□□□□□ -2.11
SHFQ7M4L6 MTND4LP30-201ENST00000454092 297 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.88□□□□□ -2.11
SHFQ7M4L6 Y_RNA.680-201ENST00000516441 93 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 RNU7-172P-201ENST00000517125 64 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.88□□□□□ -2.11
SHFQ7M4L6 AC007229.1-201ENST00000590455 412 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 AC010900.2-201ENST00000604508 210 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 AP000942.4-201ENST00000604811 241 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 AL359075.3-201ENST00000613288 217 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 U2.14-201ENST00000615943 113 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.88□□□□□ -2.11
SHFQ7M4L6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
SHFQ7M4L6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SHFQ7M4L6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SHFQ7M4L6 SNORA16B-201ENST00000364674 135 ntBASIC1.87□□□□□ -2.11
SHFQ7M4L6 Y_RNA.307-201ENST00000365022 117 ntBASIC1.87□□□□□ -2.11
SHFQ7M4L6 Y_RNA.310-201ENST00000365063 113 ntBASIC1.87□□□□□ -2.11
SHFQ7M4L6 Y_RNA.350-201ENST00000365409 98 ntBASIC1.87□□□□□ -2.11
SHFQ7M4L6 Y_RNA.368-201ENST00000365547 113 ntBASIC1.87□□□□□ -2.11
SHFQ7M4L6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.87□□□□□ -2.11
SHFQ7M4L6 RNU6-514P-201ENST00000384208 107 ntBASIC1.87□□□□□ -2.11
SHFQ7M4L6 AC024067.1-201ENST00000426199 223 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms