Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 RPS3P1-201ENST00000456781 192 ntBASIC2.22□□□□□ -2.05
USP43Q70EL4 RPL30P12-201ENST00000474666 353 ntBASIC2.22□□□□□ -2.05
USP43Q70EL4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.22□□□□□ -2.05
USP43Q70EL4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.22□□□□□ -2.05
USP43Q70EL4 MIR4658-201ENST00000584344 65 ntBASIC2.22□□□□□ -2.05
USP43Q70EL4 DNAJC19P2-201ENST00000593340 302 ntBASIC2.22□□□□□ -2.05
USP43Q70EL4 AC091152.3-201ENST00000604227 325 ntBASIC2.22□□□□□ -2.05
USP43Q70EL4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.22□□□□□ -2.05
USP43Q70EL4 AC004467.1-201ENST00000615678 330 ntBASIC2.22□□□□□ -2.05
USP43Q70EL4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.22□□□□□ -2.05
USP43Q70EL4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.22□□□□□ -2.05
USP43Q70EL4 AC012640.5-201ENST00000623897 319 ntBASIC2.22□□□□□ -2.05
USP43Q70EL4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.22□□□□□ -2.05
USP43Q70EL4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.22□□□□□ -2.05
USP43Q70EL4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USP43Q70EL4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USP43Q70EL4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USP43Q70EL4 AL596028.1-201ENST00000326971 197 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 RNU6-461P-201ENST00000364195 107 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 RNU1-51P-201ENST00000365345 176 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 RNU6-1056P-201ENST00000383996 107 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 Y_RNA.572-201ENST00000384757 98 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 AC138623.1-201ENST00000418060 216 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.21□□□□□ -2.06
USP43Q70EL4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.21□□□□□ -2.06
USP43Q70EL4 RNU7-107P-201ENST00000459121 61 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 AC092991.1-201ENST00000477176 376 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.21□□□□□ -2.06
USP43Q70EL4 AC008413.1-201ENST00000511864 177 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 Y_RNA.797-201ENST00000515977 94 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 Y_RNA.709-201ENST00000516952 92 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 SNORD19.2-201ENST00000516978 73 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.21□□□□□ -2.06
USP43Q70EL4 AC021269.2-201ENST00000532318 330 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 AC018448.1-201ENST00000552843 316 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 MIR4679-2-201ENST00000578358 77 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 MIR4744-201ENST00000581563 82 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 AC010999.1-201ENST00000611856 324 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 AC091932.3-201ENST00000624223 323 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 AC064859.1-201ENST00000624741 174 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 MTND5P32-201ENST00000560711 1802 ntBASIC2.21□□□□□ -2.06
USP43Q70EL4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
USP43Q70EL4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USP43Q70EL4 AC002543.1-201ENST00000299783 1954 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 MIR21-201ENST00000362134 72 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 SNORA38-201ENST00000363946 132 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 RNA5SP456-201ENST00000364002 114 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 RNU6-1048P-201ENST00000364054 107 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 SNORA67.4-201ENST00000384688 142 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 RNU6-443P-201ENST00000384780 107 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 MIR626-201ENST00000385032 94 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 SNORA26.5-201ENST00000391215 123 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 RNU2-54P-201ENST00000410299 190 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 Y_RNA.595-201ENST00000410403 105 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 RNU6-1064P-201ENST00000410626 104 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 RN7SKP192-201ENST00000411291 327 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 AC009963.1-201ENST00000417265 157 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 AC019205.3-201ENST00000424573 156 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 AC104389.3-201ENST00000445629 235 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 AC074290.1-201ENST00000448883 135 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.2□□□□□ -2.06
USP43Q70EL4 RNU7-26P-201ENST00000458980 63 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 AL121594.1-201ENST00000475906 575 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 RNU6-237P-201ENST00000515985 71 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 RNU1-41P-201ENST00000516161 162 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 RNU6-436P-201ENST00000516171 114 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 RNU1-48P-201ENST00000516400 162 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 RNA5SP24-201ENST00000516478 95 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 RNU6-589P-201ENST00000516485 107 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 RNU6-453P-201ENST00000516819 85 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 CYCSP23-201ENST00000519781 313 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 AC115990.1-201ENST00000526957 301 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 AC024614.2-201ENST00000577584 372 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 MIR4448-201ENST00000584360 86 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.2□□□□□ -2.06
USP43Q70EL4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.2□□□□□ -2.06
USP43Q70EL4 AC069294.1-201ENST00000608397 350 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 AL078604.3-201ENST00000615580 211 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 MIR6129-201ENST00000616087 109 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 CTSLP2-204ENST00000629029 392 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 MIR3199-2-201ENST00000636243 86 ntBASIC2.2□□□□□ -2.06
USP43Q70EL4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.2□□□□□ -2.06
USP43Q70EL4 RNU4-10P-201ENST00000364383 140 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 RNU1-112P-201ENST00000364401 164 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 Y_RNA.251-201ENST00000364551 99 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 RNU6-147P-201ENST00000383983 107 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 RNU6-245P-201ENST00000384020 107 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 RNU6-1144P-201ENST00000384247 104 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 RNU6-460P-201ENST00000391158 108 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.19□□□□□ -2.06
USP43Q70EL4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.19□□□□□ -2.06
USP43Q70EL4 RNU5F-2P-201ENST00000516066 82 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 Y_RNA.712-201ENST00000517011 92 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 RNU6-844P-201ENST00000517175 102 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.19□□□□□ -2.06
USP43Q70EL4 CYP4A27P-201ENST00000567218 190 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 SNORD53-201ENST00000579969 78 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 MIR3136-201ENST00000583498 78 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms