Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 MIR548I3-201ENST00000408378 149 ntBASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 MIR548I1-201ENST00000408810 149 ntBASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 AC123900.1-201ENST00000420390 96 ntBASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 AL137159.1-201ENST00000452808 512 ntBASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 U8.19-201ENST00000459095 133 ntBASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 Y_RNA.700-201ENST00000516806 100 ntBASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 AC009127.3-201ENST00000570531 403 ntBASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 MIR4648-201ENST00000580107 72 ntBASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 MIR5007-201ENST00000583098 95 ntBASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 AC078899.2-201ENST00000595282 212 ntBASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 AC067747.1-201ENST00000608026 250 ntBASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
C9orf139Q6ZV77 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 Y_RNA.29-201ENST00000362570 113 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 SNORA25.6-201ENST00000364121 118 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 RNU6-763P-201ENST00000390865 106 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 SNORA26.5-201ENST00000391215 123 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 AC024067.1-201ENST00000426199 223 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 BTF3P11-201ENST00000426582 477 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 Y_RNA.644-201ENST00000459006 113 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 snoU13.15-201ENST00000459407 104 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 COX6CP14-201ENST00000469580 174 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 RPS29P21-201ENST00000496272 170 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 AC026436.1-201ENST00000510537 270 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 RNY3P16-201ENST00000516338 101 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 Y_RNA.674-201ENST00000516362 113 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 AC024405.2-202ENST00000532731 184 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 CBX3P4-201ENST00000538909 354 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 AC007336.1-201ENST00000576365 3828 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 AC004792.1-201ENST00000614523 137 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 AC073349.3-201ENST00000617616 186 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 AC068700.1-201ENST00000565862 3754 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 AC009487.4-201ENST00000624969 3585 ntBASIC1.92□□□□□ -2.1
C9orf139Q6ZV77 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 SNORA27.1-201ENST00000362604 124 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 RNU6-1048P-201ENST00000364054 107 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 Y_RNA.310-201ENST00000365063 113 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 Y_RNA.368-201ENST00000365547 113 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 RNU6-47P-201ENST00000383866 107 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 MIR873-201ENST00000401120 77 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 RNU6-855P-201ENST00000410395 104 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 RNU6-710P-201ENST00000410424 105 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 PIGPP3-201ENST00000425307 415 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 AC009238.1-201ENST00000442165 424 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 AL357134.1-201ENST00000445848 426 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 AC009237.6-201ENST00000446969 424 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 RPL23AP7-203ENST00000449021 469 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 snoU13.26-201ENST00000459452 105 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 AC010598.1-201ENST00000510378 103 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 RNA5SP281-201ENST00000516504 135 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 RNU6-182P-201ENST00000516970 105 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 AC136628.3-201ENST00000521868 290 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 AC027419.1-201ENST00000522976 328 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 CYCSP26-201ENST00000534107 320 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 MIR3684-201ENST00000579779 74 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 AC046143.2-201ENST00000609789 160 ntBASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
C9orf139Q6ZV77 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
C9orf139Q6ZV77 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 SNORD114-7-201ENST00000362520 77 ntBASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 SNORD114-30-201ENST00000364448 72 ntBASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 Y_RNA.341-201ENST00000365341 102 ntBASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 SNORA72.4-201ENST00000384174 132 ntBASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 SNORA40.19-201ENST00000390846 128 ntBASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 SUMO1P2-201ENST00000452524 304 ntBASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 AL138752.1-201ENST00000452964 351 ntBASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 SNORA70.12-201ENST00000516084 153 ntBASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 RNU2-34P-201ENST00000516534 121 ntBASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 AC098479.1-201ENST00000609225 154 ntBASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 AL078604.3-201ENST00000615580 211 ntBASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 AL365265.1-201ENST00000621045 234 ntBASIC1.9□□□□□ -2.11
C9orf139Q6ZV77 AC131280.1-202ENST00000624067 4211 ntBASIC1.89□□□□□ -2.11
C9orf139Q6ZV77 AC134026.1-201ENST00000623249 2239 ntBASIC1.89□□□□□ -2.11
C9orf139Q6ZV77 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
C9orf139Q6ZV77 RNU6-653P-201ENST00000363074 106 ntBASIC1.89□□□□□ -2.11
C9orf139Q6ZV77 Y_RNA.304-201ENST00000365011 112 ntBASIC1.89□□□□□ -2.11
C9orf139Q6ZV77 RNU6-1240P-201ENST00000365155 104 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms