Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MIR4765-201ENST00000585007 77 ntBASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 AC108081.1-201ENST00000604358 221 ntBASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 RNU6-1305P-201ENST00000364353 104 ntBASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 RNU1-112P-201ENST00000364401 164 ntBASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 Y_RNA.280-201ENST00000364765 112 ntBASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 AL355796.1-201ENST00000406706 323 ntBASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 MIR1185-2-201ENST00000408687 86 ntBASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 RNA5SP21-201ENST00000410917 96 ntBASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 Y_RNA.630-201ENST00000411370 108 ntBASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 Z98742.2-201ENST00000431564 187 ntBASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 RPL36AP48-201ENST00000485521 314 ntBASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 RNU5E-3P-201ENST00000515913 68 ntBASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 HSPE1P18-201ENST00000517602 280 ntBASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 AC104027.1-201ENST00000521887 300 ntBASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 MIR378D2-201ENST00000580636 98 ntBASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 MIR7153-201ENST00000637758 57 ntBASIC3.06□□□□□ -1.92
CNKSR3Q6P9H4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 snoU2_19.1-201ENST00000362361 80 ntBASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 RNU6-1210P-201ENST00000363775 107 ntBASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 Y_RNA.584-201ENST00000391090 114 ntBASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 AC063976.4-201ENST00000421971 163 ntBASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 RPL23AP7-203ENST00000449021 469 ntBASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 RN7SL633P-201ENST00000488974 297 ntBASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 SRIP1-201ENST00000489235 288 ntBASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 RNU6-1337P-201ENST00000516525 95 ntBASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 RN7SKP282-201ENST00000516824 299 ntBASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 AP003357.1-201ENST00000604497 148 ntBASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 AL590808.1-201ENST00000618696 141 ntBASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 AC069528.2-201ENST00000624849 1991 ntBASIC3.05□□□□□ -1.92
CNKSR3Q6P9H4 U8.1-201ENST00000362843 134 ntBASIC3.04□□□□□ -1.92
CNKSR3Q6P9H4 RNA5SP68-201ENST00000363885 119 ntBASIC3.04□□□□□ -1.92
CNKSR3Q6P9H4 SNORA68.1-201ENST00000364537 132 ntBASIC3.04□□□□□ -1.92
CNKSR3Q6P9H4 MIR518C-201ENST00000384822 101 ntBASIC3.04□□□□□ -1.92
CNKSR3Q6P9H4 RNA5SP112-201ENST00000515937 99 ntBASIC3.04□□□□□ -1.92
CNKSR3Q6P9H4 SNORD33.1-201ENST00000516213 88 ntBASIC3.04□□□□□ -1.92
CNKSR3Q6P9H4 AC090142.3-201ENST00000519012 385 ntBASIC3.04□□□□□ -1.92
CNKSR3Q6P9H4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.04□□□□□ -1.92
CNKSR3Q6P9H4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.04□□□□□ -1.92
CNKSR3Q6P9H4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CNKSR3Q6P9H4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CNKSR3Q6P9H4 SNORD114-7-201ENST00000362520 77 ntBASIC3.03□□□□□ -1.92
CNKSR3Q6P9H4 RNU6-655P-201ENST00000362858 107 ntBASIC3.03□□□□□ -1.92
CNKSR3Q6P9H4 RNU6-978P-201ENST00000364371 103 ntBASIC3.03□□□□□ -1.92
CNKSR3Q6P9H4 SNORA70B-201ENST00000384210 135 ntBASIC3.03□□□□□ -1.92
CNKSR3Q6P9H4 SNORA20B-201ENST00000384220 132 ntBASIC3.03□□□□□ -1.92
CNKSR3Q6P9H4 MIR586-201ENST00000385035 97 ntBASIC3.03□□□□□ -1.92
CNKSR3Q6P9H4 RNA5SP89-201ENST00000410300 108 ntBASIC3.03□□□□□ -1.92
CNKSR3Q6P9H4 AL513477.1-202ENST00000417061 214 ntBASIC3.03□□□□□ -1.92
CNKSR3Q6P9H4 AL158147.1-201ENST00000443970 75 ntBASIC3.03□□□□□ -1.92
CNKSR3Q6P9H4 AC112771.1-201ENST00000463581 102 ntBASIC3.03□□□□□ -1.92
CNKSR3Q6P9H4 Y_RNA.757-201ENST00000578934 114 ntBASIC3.03□□□□□ -1.92
CNKSR3Q6P9H4 MIR3121-201ENST00000579680 77 ntBASIC3.03□□□□□ -1.92
CNKSR3Q6P9H4 MIR6817-201ENST00000615588 66 ntBASIC3.03□□□□□ -1.92
CNKSR3Q6P9H4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.03□□□□□ -1.93
CNKSR3Q6P9H4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 AC138915.1-201ENST00000565427 1685 ntBASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 RNU6-1164P-201ENST00000364428 107 ntBASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 SNORA51.4-201ENST00000364993 124 ntBASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 RNU6-1323P-201ENST00000384025 107 ntBASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 Y_RNA.587-201ENST00000391210 103 ntBASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 MIR873-201ENST00000401120 77 ntBASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 AC097463.2-201ENST00000421074 142 ntBASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 HMGN2P9-201ENST00000476875 229 ntBASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 SNORA64.4-201ENST00000516632 81 ntBASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 POLR3GP1-201ENST00000594073 261 ntBASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 AL021707.8-201ENST00000609428 183 ntBASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 U6.95-201ENST00000636931 70 ntBASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 Z82209.1-201ENST00000422141 2135 ntBASIC3.02□□□□□ -1.93
CNKSR3Q6P9H4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 RNU6-486P-201ENST00000363116 107 ntBASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 RNU6-484P-201ENST00000384016 107 ntBASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 RNU1-57P-201ENST00000384491 166 ntBASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 RN7SKP101-201ENST00000411376 320 ntBASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 AC245047.4-201ENST00000433189 144 ntBASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 AC006539.3-201ENST00000454258 129 ntBASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 AC008413.1-201ENST00000511864 177 ntBASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 AC096725.1-201ENST00000514266 313 ntBASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 RNU1-41P-201ENST00000516161 162 ntBASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 RNU6-168P-201ENST00000516189 101 ntBASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 SNORA72.7-201ENST00000516349 94 ntBASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 RNU1-48P-201ENST00000516400 162 ntBASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 RNU6-197P-201ENST00000516680 100 ntBASIC3.01□□□□□ -1.93
CNKSR3Q6P9H4 RNU6-1098P-201ENST00000516772 96 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms