Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC091895.1-201ENST00000624494 256 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 MIR3674-201ENST00000636576 68 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 AC073869.6-201ENST00000640656 341 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 SNORA1B-201ENST00000362535 133 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 RNU1-124P-201ENST00000363861 145 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 SNORA2.2-201ENST00000365473 135 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1□□□□□ -2.25
NIPAL3Q6P499 Y_RNA.482-201ENST00000384377 111 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 RNA5SP482-201ENST00000391269 118 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1□□□□□ -2.25
NIPAL3Q6P499 RPL23AP50-201ENST00000434149 455 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 AL137792.2-201ENST00000443484 235 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1□□□□□ -2.25
NIPAL3Q6P499 U8.22-201ENST00000459141 133 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 AC048334.1-201ENST00000477975 159 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 RPL7P42-201ENST00000481005 679 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 AC011352.1-201ENST00000512300 793 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 RNU6-1291P-201ENST00000516591 104 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 RNU6-307P-201ENST00000516743 106 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1□□□□□ -2.25
NIPAL3Q6P499 AC007014.2-201ENST00000615581 479 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 AC127459.3-201ENST00000624328 466 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 U6.115-201ENST00000636045 103 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 AC005592.1-201ENST00000566527 1640 ntBASIC1□□□□□ -2.25
NIPAL3Q6P499 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
NIPAL3Q6P499 MIR410-201ENST00000362222 80 ntBASIC0.99□□□□□ -2.25
NIPAL3Q6P499 SNORD41-201ENST00000386967 70 ntBASIC0.99□□□□□ -2.25
NIPAL3Q6P499 RNU6-910P-201ENST00000390844 107 ntBASIC0.99□□□□□ -2.25
NIPAL3Q6P499 MIR873-201ENST00000401120 77 ntBASIC0.99□□□□□ -2.25
NIPAL3Q6P499 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.99□□□□□ -2.25
NIPAL3Q6P499 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.99□□□□□ -2.25
NIPAL3Q6P499 RPS29P28-201ENST00000446439 141 ntBASIC0.99□□□□□ -2.25
NIPAL3Q6P499 MTND3P10-201ENST00000450967 341 ntBASIC0.99□□□□□ -2.25
NIPAL3Q6P499 SUMO1P2-201ENST00000452524 304 ntBASIC0.99□□□□□ -2.25
NIPAL3Q6P499 AC093850.1-201ENST00000454121 251 ntBASIC0.99□□□□□ -2.25
NIPAL3Q6P499 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.99□□□□□ -2.25
NIPAL3Q6P499 Y_RNA.638-201ENST00000459374 113 ntBASIC0.99□□□□□ -2.25
NIPAL3Q6P499 Y_RNA.655-201ENST00000515919 96 ntBASIC0.99□□□□□ -2.25
NIPAL3Q6P499 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.99□□□□□ -2.25
NIPAL3Q6P499 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
NIPAL3Q6P499 AC011712.1-201ENST00000588959 234 ntBASIC0.99□□□□□ -2.25
NIPAL3Q6P499 AL357312.1-201ENST00000603879 298 ntBASIC0.99□□□□□ -2.25
NIPAL3Q6P499 AC016727.1-205ENST00000605437 569 ntBASIC0.99□□□□□ -2.25
NIPAL3Q6P499 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.99□□□□□ -2.25
NIPAL3Q6P499 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
NIPAL3Q6P499 RNU4-79P-201ENST00000362764 141 ntBASIC0.98□□□□□ -2.25
NIPAL3Q6P499 MIR520G-201ENST00000385064 90 ntBASIC0.98□□□□□ -2.25
NIPAL3Q6P499 RNU6-1054P-201ENST00000411293 104 ntBASIC0.98□□□□□ -2.25
NIPAL3Q6P499 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.98□□□□□ -2.25
NIPAL3Q6P499 AC233266.1-201ENST00000454518 96 ntBASIC0.98□□□□□ -2.25
NIPAL3Q6P499 RPL39P39-201ENST00000455840 151 ntBASIC0.98□□□□□ -2.25
NIPAL3Q6P499 RPS23P4-201ENST00000487908 423 ntBASIC0.98□□□□□ -2.25
NIPAL3Q6P499 AC022493.2-201ENST00000506122 481 ntBASIC0.98□□□□□ -2.25
NIPAL3Q6P499 TRMT112P2-201ENST00000512910 132 ntBASIC0.98□□□□□ -2.25
NIPAL3Q6P499 SNORA40.9-201ENST00000515895 93 ntBASIC0.98□□□□□ -2.25
NIPAL3Q6P499 RNU6-917P-201ENST00000516294 104 ntBASIC0.98□□□□□ -2.25
NIPAL3Q6P499 MIR4295-201ENST00000585286 85 ntBASIC0.98□□□□□ -2.25
NIPAL3Q6P499 AC242852.1-201ENST00000612151 96 ntBASIC0.98□□□□□ -2.25
NIPAL3Q6P499 AC092794.2-201ENST00000620933 563 ntBASIC0.98□□□□□ -2.25
NIPAL3Q6P499 AC244015.1-201ENST00000622301 99 ntBASIC0.98□□□□□ -2.25
NIPAL3Q6P499 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.98□□□□□ -2.25
NIPAL3Q6P499 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.98□□□□□ -2.25
NIPAL3Q6P499 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
NIPAL3Q6P499 Y_RNA.72-201ENST00000362894 103 ntBASIC0.97□□□□□ -2.25
NIPAL3Q6P499 RNU6-1310P-201ENST00000384153 107 ntBASIC0.97□□□□□ -2.25
NIPAL3Q6P499 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.97□□□□□ -2.25
NIPAL3Q6P499 AL049830.1-201ENST00000468034 425 ntBASIC0.97□□□□□ -2.25
NIPAL3Q6P499 AC087343.1-201ENST00000477341 475 ntBASIC0.97□□□□□ -2.25
NIPAL3Q6P499 AC005840.1-201ENST00000498412 377 ntBASIC0.97□□□□□ -2.25
NIPAL3Q6P499 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.97□□□□□ -2.25
NIPAL3Q6P499 RNU6-1053P-201ENST00000515930 101 ntBASIC0.97□□□□□ -2.25
NIPAL3Q6P499 AC060780.3-201ENST00000589464 80 ntBASIC0.97□□□□□ -2.25
NIPAL3Q6P499 HSPE1P19-201ENST00000603327 295 ntBASIC0.97□□□□□ -2.25
NIPAL3Q6P499 AC080078.2-201ENST00000603766 501 ntBASIC0.97□□□□□ -2.25
NIPAL3Q6P499 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.97□□□□□ -2.25
NIPAL3Q6P499 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
NIPAL3Q6P499 Y_RNA.88-201ENST00000363029 99 ntBASIC0.96□□□□□ -2.26
NIPAL3Q6P499 Y_RNA.339-201ENST00000365325 102 ntBASIC0.96□□□□□ -2.26
NIPAL3Q6P499 RNU6-53P-201ENST00000365367 106 ntBASIC0.96□□□□□ -2.26
NIPAL3Q6P499 RNU6-318P-201ENST00000384283 103 ntBASIC0.96□□□□□ -2.26
NIPAL3Q6P499 RNU6-321P-201ENST00000410912 106 ntBASIC0.96□□□□□ -2.26
NIPAL3Q6P499 AC245047.7-201ENST00000440265 293 ntBASIC0.96□□□□□ -2.26
NIPAL3Q6P499 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.96□□□□□ -2.26
NIPAL3Q6P499 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.96□□□□□ -2.26
NIPAL3Q6P499 RPL17P19-201ENST00000489069 552 ntBASIC0.96□□□□□ -2.26
NIPAL3Q6P499 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.96□□□□□ -2.26
NIPAL3Q6P499 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.96□□□□□ -2.26
NIPAL3Q6P499 SCARNA16.2-201ENST00000516520 172 ntBASIC0.96□□□□□ -2.26
NIPAL3Q6P499 RNU6-1096P-201ENST00000517089 102 ntBASIC0.96□□□□□ -2.26
NIPAL3Q6P499 AP002001.1-203ENST00000534002 267 ntBASIC0.96□□□□□ -2.26
NIPAL3Q6P499 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.96□□□□□ -2.26
NIPAL3Q6P499 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.96□□□□□ -2.26
NIPAL3Q6P499 AC080078.3-201ENST00000605407 463 ntBASIC0.96□□□□□ -2.26
NIPAL3Q6P499 AC012676.2-201ENST00000619258 186 ntBASIC0.96□□□□□ -2.26
NIPAL3Q6P499 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.96□□□□□ -2.26
NIPAL3Q6P499 Y_RNA.124-201ENST00000363339 93 ntBASIC0.95□□□□□ -2.26
NIPAL3Q6P499 RNU6-454P-201ENST00000364292 107 ntBASIC0.95□□□□□ -2.26
NIPAL3Q6P499 Y_RNA.404-201ENST00000383978 102 ntBASIC0.95□□□□□ -2.26
NIPAL3Q6P499 RNU6-136P-201ENST00000384663 107 ntBASIC0.95□□□□□ -2.26
NIPAL3Q6P499 SNORA75.4-201ENST00000391278 119 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms