Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MIR5704-201ENST00000584029 77 ntBASIC-0.9□□□□□ -2.55
RIF1Q5UIP0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.9□□□□□ -2.55
RIF1Q5UIP0 MIR4275-201ENST00000636486 87 ntBASIC-0.9□□□□□ -2.55
RIF1Q5UIP0 SNORA63C-201ENST00000364578 129 ntBASIC-0.91□□□□□ -2.55
RIF1Q5UIP0 SNORD28-201ENST00000384706 75 ntBASIC-0.91□□□□□ -2.55
RIF1Q5UIP0 MIR518B-201ENST00000385127 83 ntBASIC-0.91□□□□□ -2.55
RIF1Q5UIP0 RNA5SP467-201ENST00000391274 118 ntBASIC-0.91□□□□□ -2.55
RIF1Q5UIP0 AC098592.1-201ENST00000419352 333 ntBASIC-0.91□□□□□ -2.55
RIF1Q5UIP0 AC090844.1-201ENST00000422019 156 ntBASIC-0.91□□□□□ -2.55
RIF1Q5UIP0 AL512286.1-201ENST00000439244 400 ntBASIC-0.91□□□□□ -2.55
RIF1Q5UIP0 AC007000.2-201ENST00000442564 487 ntBASIC-0.91□□□□□ -2.55
RIF1Q5UIP0 AC068135.1-201ENST00000446164 246 ntBASIC-0.91□□□□□ -2.55
RIF1Q5UIP0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.91□□□□□ -2.55
RIF1Q5UIP0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.91□□□□□ -2.55
RIF1Q5UIP0 AP000676.1-201ENST00000533307 52 ntBASIC-0.91□□□□□ -2.55
RIF1Q5UIP0 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-0.91□□□□□ -2.55
RIF1Q5UIP0 U6.108-201ENST00000637764 58 ntBASIC-0.91□□□□□ -2.55
RIF1Q5UIP0 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.91□□□□□ -2.56
RIF1Q5UIP0 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.91□□□□□ -2.56
RIF1Q5UIP0 RNU6-128P-201ENST00000383976 107 ntBASIC-0.91□□□□□ -2.56
RIF1Q5UIP0 MTCO3P41-201ENST00000414801 328 ntBASIC-0.91□□□□□ -2.56
RIF1Q5UIP0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.91□□□□□ -2.56
RIF1Q5UIP0 RNU7-55P-201ENST00000459426 62 ntBASIC-0.91□□□□□ -2.56
RIF1Q5UIP0 RNU6-123P-201ENST00000516163 102 ntBASIC-0.91□□□□□ -2.56
RIF1Q5UIP0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.91□□□□□ -2.56
RIF1Q5UIP0 MIR4771-2-201ENST00000577758 74 ntBASIC-0.91□□□□□ -2.56
RIF1Q5UIP0 MIR4771-1-201ENST00000582617 74 ntBASIC-0.91□□□□□ -2.56
RIF1Q5UIP0 MIR4639-201ENST00000584938 69 ntBASIC-0.91□□□□□ -2.56
RIF1Q5UIP0 AL139418.1-201ENST00000613613 177 ntBASIC-0.91□□□□□ -2.56
RIF1Q5UIP0 AL117339.3-201ENST00000418733 162 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 AC013262.1-201ENST00000426710 252 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 AL360271.2-201ENST00000447710 161 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 USP9YP12-201ENST00000450481 570 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 AL139824.2-201ENST00000458731 1095 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 MTCO3P28-201ENST00000513351 515 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 AP001372.4-201ENST00000524889 472 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 MIR4752-201ENST00000579672 72 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 AL606834.3-201ENST00000602615 496 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 AC078795.2-201ENST00000602835 1252 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 AC064872.1-201ENST00000604823 1072 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 USMG5P1-201ENST00000425964 177 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 MIR4748-201ENST00000578076 82 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 AC124016.2-201ENST00000610058 665 ntBASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.92□□□□□ -2.56
RIF1Q5UIP0 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 RNU6-1078P-201ENST00000364522 103 ntBASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 RNU4-88P-201ENST00000411220 86 ntBASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 TPTE2P5-203ENST00000458118 728 ntBASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 snoU13.14-201ENST00000459372 104 ntBASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 AC025459.1-201ENST00000504072 156 ntBASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 AL450472.1-202ENST00000637286 180 ntBASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 SNORD115-33-201ENST00000363723 82 ntBASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 MIR588-201ENST00000384900 83 ntBASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 MIR518F-201ENST00000384973 87 ntBASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 SNORD92-201ENST00000585078 85 ntBASIC-0.93□□□□□ -2.56
RIF1Q5UIP0 SNORD115-15-201ENST00000364809 81 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 MIR520C-201ENST00000385005 87 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 DPRXP1-201ENST00000426312 460 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 RNU7-41P-201ENST00000515917 61 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 RNU6-410P-201ENST00000517006 107 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 MIR6740-201ENST00000618268 113 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 RNA5SP117-201ENST00000365294 118 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 MIR891A-201ENST00000401237 79 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 CDK8P2-201ENST00000415020 547 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 BTF3P15-201ENST00000455606 336 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 TMEM251P1-201ENST00000503717 318 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 AC008752.3-201ENST00000588113 712 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 AC069431.2-201ENST00000604149 1099 ntBASIC-0.94□□□□□ -2.56
RIF1Q5UIP0 RNU6-28P-201ENST00000362378 107 ntBASIC-0.95□□□□□ -2.56
RIF1Q5UIP0 snoZ40.1-201ENST00000364540 72 ntBASIC-0.95□□□□□ -2.56
RIF1Q5UIP0 PMCHL1-202ENST00000423102 261 ntBASIC-0.95□□□□□ -2.56
RIF1Q5UIP0 AL158053.1-201ENST00000441503 453 ntBASIC-0.95□□□□□ -2.56
RIF1Q5UIP0 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.95□□□□□ -2.56
RIF1Q5UIP0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.95□□□□□ -2.56
RIF1Q5UIP0 AC133104.2-201ENST00000615272 193 ntBASIC-0.95□□□□□ -2.56
RIF1Q5UIP0 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.95□□□□□ -2.56
RIF1Q5UIP0 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.95□□□□□ -2.56
RIF1Q5UIP0 SNORD115-26-201ENST00000365067 82 ntBASIC-0.95□□□□□ -2.56
RIF1Q5UIP0 RNU6-934P-201ENST00000365154 107 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms