Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.05□□□□□ -2.4
CACNA1EQ15878 USP9YP29-201ENST00000445112 563 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 RNU7-187P-201ENST00000458985 68 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 AC010493.1-201ENST00000513479 292 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 Y_RNA.659-201ENST00000515994 113 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 RN7SKP164-201ENST00000516138 266 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 Vault.3-201ENST00000516676 95 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 RNU6-612P-201ENST00000516909 102 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.05□□□□□ -2.4
CACNA1EQ15878 AC026371.1-201ENST00000551867 419 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 AC018448.1-201ENST00000552843 316 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.05□□□□□ -2.4
CACNA1EQ15878 AC006380.1-201ENST00000603598 186 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.05□□□□□ -2.4
CACNA1EQ15878 AC244015.1-201ENST00000622301 99 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 AF246928.1-201ENST00000623768 87 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 AC007671.2-201ENST00000637344 619 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 MIR371B-201ENST00000638082 66 ntBASIC0.05□□□□□ -2.4
CACNA1EQ15878 RNU6-1303P-201ENST00000364841 107 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 Y_RNA.336-201ENST00000365307 109 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 RNU5E-5P-201ENST00000365379 116 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 RNU6-877P-201ENST00000383868 107 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 RNU6-784P-201ENST00000384330 106 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 MIR122-201ENST00000385044 85 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 MIR601-201ENST00000385256 79 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 SNORD41-201ENST00000386967 70 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 RNU6-757P-201ENST00000410334 100 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 MTCO2P8-201ENST00000412213 658 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 AL162725.1-201ENST00000435405 301 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 Z98949.2-201ENST00000440996 144 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 NFU1P2-201ENST00000448700 469 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 MTCO3P10-201ENST00000455912 772 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.04□□□□□ -2.4
CACNA1EQ15878 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1EQ15878 AC022493.2-201ENST00000506122 481 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 AC074198.2-201ENST00000508153 258 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 SNORA74.3-201ENST00000517108 154 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 AP003716.2-201ENST00000528260 108 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 AGGF1P4-201ENST00000568249 801 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 MTND5P34-201ENST00000568888 325 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 MTND1P8-201ENST00000571424 950 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 MIR3682-201ENST00000581338 84 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 AC068790.2-201ENST00000602601 557 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 MTND5P17-201ENST00000418405 1603 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 SNORA33-201ENST00000363664 130 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 RNU6-82P-201ENST00000363970 107 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 RNU6-396P-201ENST00000365369 105 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 Y_RNA.361-201ENST00000365515 120 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 Y_RNA.399-201ENST00000383955 105 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 Y_RNA.447-201ENST00000384184 113 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 SNORD38C-201ENST00000384381 69 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 MIR562-201ENST00000384894 95 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 SNORD37.1-201ENST00000390968 65 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 SNORD111-201ENST00000408139 94 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.04□□□□□ -2.4
CACNA1EQ15878 AC092447.3-201ENST00000426027 686 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 AL133217.1-201ENST00000450980 425 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 AC079354.2-201ENST00000453523 154 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 MTND3P5-201ENST00000512798 333 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 RNU2-69P-201ENST00000516061 100 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 RNU6-475P-201ENST00000516073 104 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 AL358944.1-201ENST00000528537 144 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 AC022523.2-201ENST00000561045 150 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.04□□□□□ -2.4
CACNA1EQ15878 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1EQ15878 AC090617.3-201ENST00000573670 475 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 AC091805.2-201ENST00000603848 235 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 AC007684.1-201ENST00000609671 477 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 AC006435.5-201ENST00000624486 112 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 MIR4315-1-201ENST00000636800 73 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 MIR4315-2-201ENST00000640925 73 ntBASIC0.04□□□□□ -2.4
CACNA1EQ15878 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
CACNA1EQ15878 RNU5F-7P-201ENST00000363696 115 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 RNU6-767P-201ENST00000384132 107 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 RNU6-1297P-201ENST00000384415 104 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 RNA5SP482-201ENST00000391269 118 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 AC012306.1-201ENST00000423267 114 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 AC073464.1-201ENST00000429823 534 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 SNRPGP14-201ENST00000435400 219 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 AC073910.1-201ENST00000445047 438 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 ZNF114P1-201ENST00000453500 292 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 SNORD65B-201ENST00000459126 73 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 RNU4-49P-201ENST00000516080 140 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 RNU6-1198P-201ENST00000516904 67 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 RNU7-172P-201ENST00000517125 64 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 RNU6-58P-201ENST00000517143 103 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 AC115990.1-201ENST00000526957 301 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 AC068587.5-201ENST00000528506 175 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 AC007751.1-201ENST00000529260 376 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.03□□□□□ -2.4
CACNA1EQ15878 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.03□□□□□ -2.4
CACNA1EQ15878 MIR8076-201ENST00000611401 83 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.03□□□□□ -2.4
CACNA1EQ15878 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.03□□□□□ -2.4
CACNA1EQ15878 MIR6516-201ENST00000630554 81 ntBASIC0.03□□□□□ -2.4
CACNA1EQ15878 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms