Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 AC121247.2-201ENST00000604776 136 ntBASIC-1.31□□□□□ -2.62
HMGN3Q15651 SNORA70.25-201ENST00000612741 95 ntBASIC-1.31□□□□□ -2.62
HMGN3Q15651 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
HMGN3Q15651 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 MTCO3P19-201ENST00000415864 321 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 MCFD2P1-201ENST00000417812 300 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.32□□□□□ -2.62
HMGN3Q15651 AL117351.1-201ENST00000438864 766 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.32□□□□□ -2.62
HMGN3Q15651 AL031274.1-201ENST00000450334 232 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-1.32□□□□□ -2.62
HMGN3Q15651 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 RNU7-51P-201ENST00000516560 62 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 SCARNA1-201ENST00000517138 166 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-1.32□□□□□ -2.62
HMGN3Q15651 IGKV1-22-201ENST00000524313 326 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 MIR378D2-201ENST00000580636 98 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.32□□□□□ -2.62
HMGN3Q15651 U7.6-201ENST00000610841 64 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.32□□□□□ -2.62
HMGN3Q15651 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.33□□□□□ -2.62
HMGN3Q15651 MIR101-2-201ENST00000362195 79 ntBASIC-1.33□□□□□ -2.62
HMGN3Q15651 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.33□□□□□ -2.62
HMGN3Q15651 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.33□□□□□ -2.62
HMGN3Q15651 SPINT5P-201ENST00000448174 155 ntBASIC-1.33□□□□□ -2.62
HMGN3Q15651 SNORD65B-201ENST00000459126 73 ntBASIC-1.33□□□□□ -2.62
HMGN3Q15651 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.33□□□□□ -2.62
HMGN3Q15651 RNA5SP66-201ENST00000517178 101 ntBASIC-1.33□□□□□ -2.62
HMGN3Q15651 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.33□□□□□ -2.62
HMGN3Q15651 MIR5706-201ENST00000579841 80 ntBASIC-1.33□□□□□ -2.62
HMGN3Q15651 AC073343.1-201ENST00000328239 651 ntBASIC-1.34□□□□□ -2.62
HMGN3Q15651 Y_RNA.192-201ENST00000363977 102 ntBASIC-1.34□□□□□ -2.62
HMGN3Q15651 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.34□□□□□ -2.62
HMGN3Q15651 SNORD28-201ENST00000384706 75 ntBASIC-1.34□□□□□ -2.62
HMGN3Q15651 RNU6-376P-201ENST00000384731 106 ntBASIC-1.34□□□□□ -2.62
HMGN3Q15651 SNORD83B-201ENST00000386745 93 ntBASIC-1.34□□□□□ -2.62
HMGN3Q15651 RNU6-138P-201ENST00000515952 107 ntBASIC-1.34□□□□□ -2.62
HMGN3Q15651 RNA5SP169-201ENST00000517268 117 ntBASIC-1.34□□□□□ -2.62
HMGN3Q15651 AC068587.4-201ENST00000533893 186 ntBASIC-1.34□□□□□ -2.62
HMGN3Q15651 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.34□□□□□ -2.62
HMGN3Q15651 MIR3681-201ENST00000580089 72 ntBASIC-1.34□□□□□ -2.62
HMGN3Q15651 AC005776.1-201ENST00000603164 290 ntBASIC-1.34□□□□□ -2.62
HMGN3Q15651 AF250324.2-201ENST00000608299 610 ntBASIC-1.34□□□□□ -2.62
HMGN3Q15651 AC022306.3-201ENST00000619930 550 ntBASIC-1.34□□□□□ -2.62
HMGN3Q15651 AC091948.2-201ENST00000636510 279 ntBASIC-1.34□□□□□ -2.62
HMGN3Q15651 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.35□□□□□ -2.63
HMGN3Q15651 RNU6-827P-201ENST00000365553 106 ntBASIC-1.35□□□□□ -2.63
HMGN3Q15651 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.35□□□□□ -2.63
HMGN3Q15651 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.35□□□□□ -2.63
HMGN3Q15651 MIR18B-201ENST00000454574 71 ntBASIC-1.35□□□□□ -2.63
HMGN3Q15651 AC091133.4-201ENST00000511142 308 ntBASIC-1.35□□□□□ -2.63
HMGN3Q15651 RNU6-344P-201ENST00000516635 111 ntBASIC-1.35□□□□□ -2.63
HMGN3Q15651 LRRC34P1-201ENST00000542742 915 ntBASIC-1.35□□□□□ -2.63
HMGN3Q15651 HIF1AP1-201ENST00000553642 175 ntBASIC-1.35□□□□□ -2.63
HMGN3Q15651 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.35□□□□□ -2.63
HMGN3Q15651 MIR548AX-201ENST00000580117 73 ntBASIC-1.35□□□□□ -2.63
HMGN3Q15651 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-1.35□□□□□ -2.63
HMGN3Q15651 AC087683.1-201ENST00000591187 441 ntBASIC-1.35□□□□□ -2.63
HMGN3Q15651 MTATP6P2-201ENST00000603319 678 ntBASIC-1.35□□□□□ -2.63
HMGN3Q15651 AC091965.4-201ENST00000607691 587 ntBASIC-1.35□□□□□ -2.63
HMGN3Q15651 AC063944.3-201ENST00000609969 533 ntBASIC-1.35□□□□□ -2.63
HMGN3Q15651 uc_338.4-201ENST00000616635 176 ntBASIC-1.35□□□□□ -2.63
HMGN3Q15651 AC010608.3-201ENST00000625048 527 ntBASIC-1.35□□□□□ -2.63
HMGN3Q15651 MTND4P9-201ENST00000507819 1346 ntBASIC-1.36□□□□□ -2.63
HMGN3Q15651 SNORD114-15-201ENST00000364687 72 ntBASIC-1.36□□□□□ -2.63
HMGN3Q15651 SNORD87-201ENST00000364849 89 ntBASIC-1.36□□□□□ -2.63
HMGN3Q15651 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.36□□□□□ -2.63
HMGN3Q15651 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.36□□□□□ -2.63
HMGN3Q15651 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.36□□□□□ -2.63
HMGN3Q15651 AL358934.1-201ENST00000432346 324 ntBASIC-1.36□□□□□ -2.63
HMGN3Q15651 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.36□□□□□ -2.63
HMGN3Q15651 AP001328.1-201ENST00000528550 176 ntBASIC-1.36□□□□□ -2.63
HMGN3Q15651 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.36□□□□□ -2.63
HMGN3Q15651 Z94722.1-201ENST00000604328 474 ntBASIC-1.36□□□□□ -2.63
HMGN3Q15651 AC105081.1-201ENST00000617727 106 ntBASIC-1.36□□□□□ -2.63
HMGN3Q15651 RNU6-1303P-201ENST00000364841 107 ntBASIC-1.37□□□□□ -2.63
HMGN3Q15651 SNORA51.10-201ENST00000384418 136 ntBASIC-1.37□□□□□ -2.63
HMGN3Q15651 HMGN1P33-201ENST00000432945 451 ntBASIC-1.37□□□□□ -2.63
HMGN3Q15651 EPS15P1-201ENST00000448836 336 ntBASIC-1.37□□□□□ -2.63
HMGN3Q15651 RPL23AP75-201ENST00000491601 451 ntBASIC-1.37□□□□□ -2.63
HMGN3Q15651 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.37□□□□□ -2.63
HMGN3Q15651 SNORA31.14-201ENST00000516728 116 ntBASIC-1.37□□□□□ -2.63
HMGN3Q15651 RNU6-135P-201ENST00000516769 101 ntBASIC-1.37□□□□□ -2.63
HMGN3Q15651 AC026741.1-201ENST00000605892 482 ntBASIC-1.37□□□□□ -2.63
HMGN3Q15651 SNORD11B-201ENST00000607707 90 ntBASIC-1.37□□□□□ -2.63
HMGN3Q15651 AC022306.2-201ENST00000617563 647 ntBASIC-1.37□□□□□ -2.63
HMGN3Q15651 AC244669.1-204ENST00000621564 178 ntBASIC-1.37□□□□□ -2.63
HMGN3Q15651 AC006435.5-201ENST00000624486 112 ntBASIC-1.37□□□□□ -2.63
HMGN3Q15651 SNORA24.1-201ENST00000384401 135 ntBASIC-1.38□□□□□ -2.63
HMGN3Q15651 RNU6-769P-201ENST00000384407 104 ntBASIC-1.38□□□□□ -2.63
HMGN3Q15651 RNU2-39P-201ENST00000410604 198 ntBASIC-1.38□□□□□ -2.63
HMGN3Q15651 RNA5SP494-201ENST00000410653 129 ntBASIC-1.38□□□□□ -2.63
HMGN3Q15651 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.38□□□□□ -2.63
HMGN3Q15651 RNU7-73P-201ENST00000458743 63 ntBASIC-1.38□□□□□ -2.63
HMGN3Q15651 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.38□□□□□ -2.63
HMGN3Q15651 MIR4639-201ENST00000584938 69 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms