Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.31□□□□□ -2.04
DDR1Q08345 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
DDR1Q08345 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.3□□□□□ -2.04
DDR1Q08345 snoU2_19.1-201ENST00000362361 80 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 RNA5SP361-201ENST00000362686 118 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 SNORD113-8-201ENST00000363497 74 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 U3.9-201ENST00000363823 204 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 RNU6-873P-201ENST00000363833 107 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 Y_RNA.200-201ENST00000364018 102 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 Y_RNA.286-201ENST00000364813 102 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 RNU6-245P-201ENST00000384020 107 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 MIR489-201ENST00000384923 84 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 Y_RNA.581-201ENST00000391017 97 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 SNORD58.1-201ENST00000391313 66 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 RNU6-651P-201ENST00000411040 105 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 AC004866.1-201ENST00000411748 78 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 AL445305.1-201ENST00000432577 575 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 AC104332.1-201ENST00000440471 797 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 RPL26P26-201ENST00000480251 434 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 RNU4-71P-201ENST00000516258 113 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 RNU7-193P-201ENST00000516723 65 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 AC022868.1-201ENST00000517767 391 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 AC022559.1-201ENST00000520905 205 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 MIR4255-201ENST00000579351 72 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.3□□□□□ -2.04
DDR1Q08345 U2.14-201ENST00000615943 113 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 AC240442.1-201ENST00000616055 283 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 AC127459.3-201ENST00000624328 466 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.3□□□□□ -2.04
DDR1Q08345 LINC02555-201ENST00000563933 1951 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 AC008555.8-201ENST00000623602 2168 ntBASIC2.3□□□□□ -2.04
DDR1Q08345 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
DDR1Q08345 RNU6-541P-201ENST00000384709 110 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 MIR29C-201ENST00000385231 88 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 RNU2-32P-201ENST00000411193 191 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 RNU6-1001P-201ENST00000411265 100 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 AC007395.1-201ENST00000451333 677 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 AL137159.1-201ENST00000452808 512 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 HSPE1P25-201ENST00000455484 251 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.29□□□□□ -2.04
DDR1Q08345 SERF1AP1-201ENST00000514575 187 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 RNU6-496P-201ENST00000516145 99 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 Y_RNA.700-201ENST00000516806 100 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 AC024405.2-202ENST00000532731 184 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 AC022616.8-201ENST00000533569 253 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.29□□□□□ -2.04
DDR1Q08345 DNAJC19P9-201ENST00000555084 351 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 MIR4659A-201ENST00000580269 81 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 AC007229.1-201ENST00000590455 412 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 AL031274.2-201ENST00000599419 203 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 AC005296.1-201ENST00000616145 209 ntBASIC2.29□□□□□ -2.04
DDR1Q08345 ZNF204P-201ENST00000416749 2397 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
DDR1Q08345 RNU6-545P-201ENST00000362681 104 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 Y_RNA.83-201ENST00000363005 113 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 SNORD81.1-201ENST00000363064 77 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 SNORA25.9-201ENST00000365087 128 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 RNU6-125P-201ENST00000384505 107 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 RNU6-1274P-201ENST00000384557 107 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 MIR549A-201ENST00000385268 96 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
DDR1Q08345 RNU4-30P-201ENST00000410245 143 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 Y_RNA.793-201ENST00000411222 111 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.28□□□□□ -2.04
DDR1Q08345 Y_RNA.644-201ENST00000459006 113 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 SNORA4.4-201ENST00000515921 135 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 Y_RNA.674-201ENST00000516362 113 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 Y_RNA.683-201ENST00000516508 93 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 RNU6-789P-201ENST00000517105 102 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 AC087441.2-201ENST00000529141 262 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 CBX3P4-201ENST00000538909 354 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 MIR5695-201ENST00000579717 85 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.28□□□□□ -2.04
DDR1Q08345 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.28□□□□□ -2.04
DDR1Q08345 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
DDR1Q08345 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
DDR1Q08345 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
DDR1Q08345 AL359851.1-201ENST00000569460 4997 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 MIR411-201ENST00000362239 96 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 RNU1-23P-201ENST00000363361 144 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 RNU6-682P-201ENST00000363843 106 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 Y_RNA.199-201ENST00000364014 102 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 RNU6-879P-201ENST00000364328 108 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 RNU6-47P-201ENST00000383866 107 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 RNU6-746P-201ENST00000384112 109 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 Y_RNA.506-201ENST00000384494 102 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 SNORD78.2-201ENST00000391076 69 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 SNORA12-201ENST00000391162 147 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 AL355497.1-201ENST00000406262 551 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 RN7SKP51-201ENST00000410781 304 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 COX6CP10-201ENST00000416832 224 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.27□□□□□ -2.05
DDR1Q08345 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.27□□□□□ -2.05
DDR1Q08345 RNU7-95P-201ENST00000459222 64 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 SNORD116-28-201ENST00000516123 91 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 RNU6-861P-201ENST00000516745 106 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 SNORA31.25-201ENST00000517242 134 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.27□□□□□ -2.05
DDR1Q08345 MIR3935-201ENST00000583472 104 ntBASIC2.27□□□□□ -2.05
DDR1Q08345 BX284668.6-201ENST00000606899 438 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms