Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU6-1310P-201ENST00000384153 107 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 Y_RNA.474-201ENST00000384341 102 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 RNU6-136P-201ENST00000384663 107 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 SNORA26.9-201ENST00000391322 122 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN1BQ07699 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.28□□□□□ -2.2
SCN1BQ07699 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN1BQ07699 AC098614.3-201ENST00000438957 440 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 SUMO1P2-201ENST00000452524 304 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 AC233266.1-201ENST00000454518 96 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 RNU7-169P-201ENST00000459456 61 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 AC082651.2-201ENST00000496833 166 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.28□□□□□ -2.2
SCN1BQ07699 RNU6-63P-201ENST00000516690 95 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 RNU7-4P-201ENST00000516961 62 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 RNU6-1096P-201ENST00000517089 102 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 AC008269.2-201ENST00000561915 1105 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 AC113139.1-201ENST00000605049 239 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 AC242852.1-201ENST00000612151 96 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 AC244015.1-201ENST00000622301 99 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
SCN1BQ07699 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
SCN1BQ07699 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
SCN1BQ07699 RNU6-961P-201ENST00000363893 105 ntBASIC1.27□□□□□ -2.21
SCN1BQ07699 RNU6-457P-201ENST00000363999 107 ntBASIC1.27□□□□□ -2.21
SCN1BQ07699 RNY3P11-201ENST00000364153 102 ntBASIC1.27□□□□□ -2.21
SCN1BQ07699 Y_RNA.243-201ENST00000364481 109 ntBASIC1.27□□□□□ -2.21
SCN1BQ07699 SNORA67.6-201ENST00000391093 99 ntBASIC1.27□□□□□ -2.21
SCN1BQ07699 MIR1323-201ENST00000408090 73 ntBASIC1.27□□□□□ -2.21
SCN1BQ07699 MTCO3P10-201ENST00000455912 772 ntBASIC1.27□□□□□ -2.21
SCN1BQ07699 RNU7-28P-201ENST00000516759 62 ntBASIC1.27□□□□□ -2.21
SCN1BQ07699 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN1BQ07699 AC015720.1-201ENST00000565251 277 ntBASIC1.27□□□□□ -2.21
SCN1BQ07699 AL513534.2-201ENST00000603836 250 ntBASIC1.27□□□□□ -2.21
SCN1BQ07699 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
SCN1BQ07699 MIR520G-201ENST00000385064 90 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 MIR517C-201ENST00000385103 95 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 AL354695.1-201ENST00000427935 228 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 AC015922.2-201ENST00000435593 184 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 SNRPGP13-201ENST00000442212 177 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 AC093850.1-201ENST00000454121 251 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 Y_RNA.653-201ENST00000459091 95 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 SNORD13-201ENST00000459299 104 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 RNU7-40P-201ENST00000516397 64 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 SNORA20.3-201ENST00000516880 132 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.26□□□□□ -2.21
SCN1BQ07699 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.26□□□□□ -2.21
SCN1BQ07699 AC055872.1-201ENST00000570978 278 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 MIR3945-201ENST00000581853 98 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 AL355073.2-201ENST00000612106 557 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 AC004467.1-201ENST00000615678 330 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 AC099654.14-201ENST00000638599 341 ntBASIC1.26□□□□□ -2.21
SCN1BQ07699 SNORD115-30-201ENST00000364117 82 ntBASIC1.25□□□□□ -2.21
SCN1BQ07699 RNA5SP482-201ENST00000391269 118 ntBASIC1.25□□□□□ -2.21
SCN1BQ07699 RNU5A-5P-201ENST00000411054 116 ntBASIC1.25□□□□□ -2.21
SCN1BQ07699 MRPS18CP6-201ENST00000423587 223 ntBASIC1.25□□□□□ -2.21
SCN1BQ07699 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.25□□□□□ -2.21
SCN1BQ07699 PRDX4P1-201ENST00000507189 574 ntBASIC1.25□□□□□ -2.21
SCN1BQ07699 RNU6-470P-201ENST00000515954 104 ntBASIC1.25□□□□□ -2.21
SCN1BQ07699 RNU6-917P-201ENST00000516294 104 ntBASIC1.25□□□□□ -2.21
SCN1BQ07699 RNU6-548P-201ENST00000517083 115 ntBASIC1.25□□□□□ -2.21
SCN1BQ07699 RNU2-12P-201ENST00000517216 168 ntBASIC1.25□□□□□ -2.21
SCN1BQ07699 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.25□□□□□ -2.21
SCN1BQ07699 AC122108.2-201ENST00000611946 526 ntBASIC1.25□□□□□ -2.21
SCN1BQ07699 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.25□□□□□ -2.21
SCN1BQ07699 Y_RNA.390-201ENST00000383932 102 ntBASIC1.24□□□□□ -2.21
SCN1BQ07699 RNU6-1297P-201ENST00000384415 104 ntBASIC1.24□□□□□ -2.21
SCN1BQ07699 SNORD41-201ENST00000386967 70 ntBASIC1.24□□□□□ -2.21
SCN1BQ07699 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
SCN1BQ07699 Y_RNA.605-201ENST00000410577 105 ntBASIC1.24□□□□□ -2.21
SCN1BQ07699 AC138393.2-201ENST00000414742 246 ntBASIC1.24□□□□□ -2.21
SCN1BQ07699 RBMX2P4-201ENST00000441256 376 ntBASIC1.24□□□□□ -2.21
SCN1BQ07699 AL049830.1-201ENST00000468034 425 ntBASIC1.24□□□□□ -2.21
SCN1BQ07699 RNU7-12P-201ENST00000516030 62 ntBASIC1.24□□□□□ -2.21
SCN1BQ07699 AC144568.1-201ENST00000520139 137 ntBASIC1.24□□□□□ -2.21
SCN1BQ07699 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
SCN1BQ07699 AC133104.2-201ENST00000615272 193 ntBASIC1.24□□□□□ -2.21
SCN1BQ07699 MIR7843-201ENST00000622274 79 ntBASIC1.24□□□□□ -2.21
SCN1BQ07699 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.24□□□□□ -2.21
SCN1BQ07699 AC091812.1-201ENST00000432235 1948 ntBASIC1.24□□□□□ -2.21
SCN1BQ07699 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SCN1BQ07699 Y_RNA.314-201ENST00000365114 102 ntBASIC1.23□□□□□ -2.21
SCN1BQ07699 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
SCN1BQ07699 FCF1P4-201ENST00000448326 183 ntBASIC1.23□□□□□ -2.21
SCN1BQ07699 ELOCP24-201ENST00000456370 334 ntBASIC1.23□□□□□ -2.21
SCN1BQ07699 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
SCN1BQ07699 AC090049.2-201ENST00000550377 109 ntBASIC1.23□□□□□ -2.21
SCN1BQ07699 MIR3683-201ENST00000580847 82 ntBASIC1.23□□□□□ -2.21
SCN1BQ07699 AL022345.2-201ENST00000606307 135 ntBASIC1.23□□□□□ -2.21
SCN1BQ07699 GHRLOS.1-201ENST00000610995 70 ntBASIC1.23□□□□□ -2.21
SCN1BQ07699 MTND4LP32-201ENST00000636111 270 ntBASIC1.23□□□□□ -2.21
SCN1BQ07699 SNORD114-7-201ENST00000362520 77 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 RNU4-41P-201ENST00000364426 143 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 Y_RNA.259-201ENST00000364619 101 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 RNU6-60P-201ENST00000364792 103 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 Y_RNA.361-201ENST00000365515 120 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 SNORA25-201ENST00000384384 134 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 RNY3P4-201ENST00000384428 101 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 MIR222-201ENST00000384992 110 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms