Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MIR421-201ENST00000365696 85 ntBASIC-2.05□□□□□ -2.74
TFF3Q07654 RNU6-1292P-201ENST00000383856 107 ntBASIC-2.05□□□□□ -2.74
TFF3Q07654 SNORA75B-201ENST00000384053 137 ntBASIC-2.05□□□□□ -2.74
TFF3Q07654 RNU6-114P-201ENST00000384704 105 ntBASIC-2.05□□□□□ -2.74
TFF3Q07654 RNU6-205P-201ENST00000390858 107 ntBASIC-2.05□□□□□ -2.74
TFF3Q07654 AL929288.2-201ENST00000446368 407 ntBASIC-2.05□□□□□ -2.74
TFF3Q07654 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-2.05□□□□□ -2.74
TFF3Q07654 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-2.05□□□□□ -2.74
TFF3Q07654 RNU6-475P-201ENST00000516073 104 ntBASIC-2.05□□□□□ -2.74
TFF3Q07654 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-2.05□□□□□ -2.74
TFF3Q07654 MIR3179-1-201ENST00000578940 84 ntBASIC-2.05□□□□□ -2.74
TFF3Q07654 MIR3179-2-201ENST00000579107 84 ntBASIC-2.05□□□□□ -2.74
TFF3Q07654 MIR3179-3-201ENST00000579566 84 ntBASIC-2.05□□□□□ -2.74
TFF3Q07654 AC008752.3-201ENST00000588113 712 ntBASIC-2.05□□□□□ -2.74
TFF3Q07654 MIR3179-4-201ENST00000617599 84 ntBASIC-2.05□□□□□ -2.74
TFF3Q07654 MTND5P18-201ENST00000445624 1801 ntBASIC-2.05□□□□□ -2.74
TFF3Q07654 RNU6-702P-201ENST00000364982 107 ntBASIC-2.06□□□□□ -2.74
TFF3Q07654 MIR496-201ENST00000385226 102 ntBASIC-2.06□□□□□ -2.74
TFF3Q07654 BX119904.4-201ENST00000424402 301 ntBASIC-2.06□□□□□ -2.74
TFF3Q07654 MTND1P26-201ENST00000440488 538 ntBASIC-2.06□□□□□ -2.74
TFF3Q07654 AC011352.1-201ENST00000512300 793 ntBASIC-2.06□□□□□ -2.74
TFF3Q07654 AC010493.1-201ENST00000513479 292 ntBASIC-2.06□□□□□ -2.74
TFF3Q07654 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-2.06□□□□□ -2.74
TFF3Q07654 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-2.06□□□□□ -2.74
TFF3Q07654 AC244669.1-204ENST00000621564 178 ntBASIC-2.06□□□□□ -2.74
TFF3Q07654 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-2.06□□□□□ -2.74
TFF3Q07654 MIR9-2-201ENST00000384838 87 ntBASIC-2.07□□□□□ -2.74
TFF3Q07654 RNU6-1186P-201ENST00000410429 97 ntBASIC-2.07□□□□□ -2.74
TFF3Q07654 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-2.07□□□□□ -2.74
TFF3Q07654 AL445193.1-201ENST00000441183 141 ntBASIC-2.07□□□□□ -2.74
TFF3Q07654 RNU6-885P-201ENST00000516607 104 ntBASIC-2.07□□□□□ -2.74
TFF3Q07654 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-2.07□□□□□ -2.74
TFF3Q07654 AC103996.1-201ENST00000555468 102 ntBASIC-2.07□□□□□ -2.74
TFF3Q07654 AC090517.1-201ENST00000569307 266 ntBASIC-2.07□□□□□ -2.74
TFF3Q07654 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-2.07□□□□□ -2.74
TFF3Q07654 OR4H6P-202ENST00000603819 340 ntBASIC-2.07□□□□□ -2.74
TFF3Q07654 AC005562.2-201ENST00000618264 111 ntBASIC-2.07□□□□□ -2.74
TFF3Q07654 U6.73-201ENST00000619194 103 ntBASIC-2.07□□□□□ -2.74
TFF3Q07654 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-2.08□□□□□ -2.74
TFF3Q07654 RNU6-540P-201ENST00000384622 101 ntBASIC-2.08□□□□□ -2.74
TFF3Q07654 AC008134.1-201ENST00000420943 193 ntBASIC-2.08□□□□□ -2.74
TFF3Q07654 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-2.08□□□□□ -2.74
TFF3Q07654 RPL30P15-201ENST00000457129 321 ntBASIC-2.08□□□□□ -2.74
TFF3Q07654 RNU7-185P-201ENST00000459215 60 ntBASIC-2.08□□□□□ -2.74
TFF3Q07654 Y_RNA.687-201ENST00000516558 91 ntBASIC-2.08□□□□□ -2.74
TFF3Q07654 AL138889.2-201ENST00000603883 242 ntBASIC-2.08□□□□□ -2.74
TFF3Q07654 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-2.08□□□□□ -2.74
TFF3Q07654 MIR382-201ENST00000637119 76 ntBASIC-2.08□□□□□ -2.74
TFF3Q07654 Y_RNA.114-201ENST00000363265 113 ntBASIC-2.09□□□□□ -2.74
TFF3Q07654 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.09□□□□□ -2.74
TFF3Q07654 MIR147A-201ENST00000385079 72 ntBASIC-2.09□□□□□ -2.74
TFF3Q07654 MIR136-201ENST00000385207 82 ntBASIC-2.09□□□□□ -2.74
TFF3Q07654 MIR1257-201ENST00000408490 117 ntBASIC-2.09□□□□□ -2.74
TFF3Q07654 RNU2-54P-201ENST00000410299 190 ntBASIC-2.09□□□□□ -2.74
TFF3Q07654 AC091951.3-201ENST00000504093 246 ntBASIC-2.09□□□□□ -2.74
TFF3Q07654 AC253576.2-201ENST00000618815 580 ntBASIC-2.09□□□□□ -2.74
TFF3Q07654 AC138649.3-201ENST00000622154 254 ntBASIC-2.09□□□□□ -2.74
TFF3Q07654 Y_RNA.32-201ENST00000362589 110 ntBASIC-2.1□□□□□ -2.75
TFF3Q07654 RNU6-490P-201ENST00000362985 107 ntBASIC-2.1□□□□□ -2.75
TFF3Q07654 RNU4-28P-201ENST00000364739 141 ntBASIC-2.1□□□□□ -2.75
TFF3Q07654 RNU6-1240P-201ENST00000365155 104 ntBASIC-2.1□□□□□ -2.75
TFF3Q07654 SNORD115-44-201ENST00000365391 82 ntBASIC-2.1□□□□□ -2.75
TFF3Q07654 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.1□□□□□ -2.75
TFF3Q07654 RNU6-378P-201ENST00000384324 107 ntBASIC-2.1□□□□□ -2.75
TFF3Q07654 FCF1P4-201ENST00000448326 183 ntBASIC-2.1□□□□□ -2.75
TFF3Q07654 AL138752.1-201ENST00000452964 351 ntBASIC-2.1□□□□□ -2.75
TFF3Q07654 AC005178.1-201ENST00000508392 440 ntBASIC-2.1□□□□□ -2.75
TFF3Q07654 AC025647.1-201ENST00000517879 253 ntBASIC-2.1□□□□□ -2.75
TFF3Q07654 POLR3GP2-201ENST00000588366 668 ntBASIC-2.1□□□□□ -2.75
TFF3Q07654 AC073869.9-201ENST00000641610 120 ntBASIC-2.1□□□□□ -2.75
TFF3Q07654 ZNF299P-201ENST00000406845 1804 ntBASIC-2.11□□□□□ -2.75
TFF3Q07654 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-2.11□□□□□ -2.75
TFF3Q07654 RNU6-97P-201ENST00000363387 104 ntBASIC-2.11□□□□□ -2.75
TFF3Q07654 Y_RNA.283-201ENST00000364798 112 ntBASIC-2.11□□□□□ -2.75
TFF3Q07654 MIR562-201ENST00000384894 95 ntBASIC-2.11□□□□□ -2.75
TFF3Q07654 MIR518B-201ENST00000385127 83 ntBASIC-2.11□□□□□ -2.75
TFF3Q07654 SNORD64-201ENST00000386683 67 ntBASIC-2.11□□□□□ -2.75
TFF3Q07654 MCFD2P1-201ENST00000417812 300 ntBASIC-2.11□□□□□ -2.75
TFF3Q07654 AC244505.6-201ENST00000452829 130 ntBASIC-2.11□□□□□ -2.75
TFF3Q07654 RNU2-56P-201ENST00000516826 190 ntBASIC-2.11□□□□□ -2.75
TFF3Q07654 MIR4637-201ENST00000582405 84 ntBASIC-2.11□□□□□ -2.75
TFF3Q07654 AC005520.5-201ENST00000613926 164 ntBASIC-2.11□□□□□ -2.75
TFF3Q07654 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-2.11□□□□□ -2.75
TFF3Q07654 RNU6-386P-201ENST00000362650 107 ntBASIC-2.12□□□□□ -2.75
TFF3Q07654 Y_RNA.56-201ENST00000362798 112 ntBASIC-2.12□□□□□ -2.75
TFF3Q07654 RNU6-431P-201ENST00000383874 107 ntBASIC-2.12□□□□□ -2.75
TFF3Q07654 SNORD56B-201ENST00000384713 71 ntBASIC-2.12□□□□□ -2.75
TFF3Q07654 MTND4P25-201ENST00000441039 533 ntBASIC-2.12□□□□□ -2.75
TFF3Q07654 AC074290.1-201ENST00000448883 135 ntBASIC-2.12□□□□□ -2.75
TFF3Q07654 MTCO3P9-201ENST00000506989 781 ntBASIC-2.12□□□□□ -2.75
TFF3Q07654 SNORD38.3-201ENST00000516599 73 ntBASIC-2.12□□□□□ -2.75
TFF3Q07654 SNORA31.14-201ENST00000516728 116 ntBASIC-2.12□□□□□ -2.75
TFF3Q07654 AC068587.5-201ENST00000528506 175 ntBASIC-2.12□□□□□ -2.75
TFF3Q07654 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-2.12□□□□□ -2.75
TFF3Q07654 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-2.12□□□□□ -2.75
TFF3Q07654 AC132825.6-201ENST00000638861 357 ntBASIC-2.12□□□□□ -2.75
TFF3Q07654 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.13□□□□□ -2.75
TFF3Q07654 Y_RNA.329-201ENST00000365209 107 ntBASIC-2.13□□□□□ -2.75
TFF3Q07654 Y_RNA.352-201ENST00000365439 102 ntBASIC-2.13□□□□□ -2.75
TFF3Q07654 MIR10A-201ENST00000385043 110 ntBASIC-2.13□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms