Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 AC091951.2-201ENST00000500762 203 ntBASIC1.25□□□□□ -2.21
UBXN1Q04323 AC105758.1-201ENST00000506038 399 ntBASIC1.25□□□□□ -2.21
UBXN1Q04323 AC010598.1-201ENST00000510378 103 ntBASIC1.25□□□□□ -2.21
UBXN1Q04323 AC074133.1-201ENST00000515696 183 ntBASIC1.25□□□□□ -2.21
UBXN1Q04323 SNORA40.9-201ENST00000515895 93 ntBASIC1.25□□□□□ -2.21
UBXN1Q04323 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
UBXN1Q04323 AL162424.1-201ENST00000602325 221 ntBASIC1.25□□□□□ -2.21
UBXN1Q04323 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.25□□□□□ -2.21
UBXN1Q04323 AC027335.2-201ENST00000624030 375 ntBASIC1.25□□□□□ -2.21
UBXN1Q04323 AC006435.5-201ENST00000624486 112 ntBASIC1.25□□□□□ -2.21
UBXN1Q04323 SNORD3E-202ENST00000627253 216 ntBASIC1.25□□□□□ -2.21
UBXN1Q04323 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
UBXN1Q04323 AC073544.1-201ENST00000600110 1595 ntBASIC1.25□□□□□ -2.21
UBXN1Q04323 RNU1-22P-201ENST00000363334 158 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 RNY3P11-201ENST00000364153 102 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 RNU6-454P-201ENST00000364292 107 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 Y_RNA.498-201ENST00000384460 102 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 SNORD116-29-201ENST00000384516 83 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 MIR660-201ENST00000385235 97 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
UBXN1Q04323 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.24□□□□□ -2.21
UBXN1Q04323 SNORD12B-201ENST00000410433 91 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 AC114482.1-201ENST00000418010 247 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 MRPS18CP6-201ENST00000423587 223 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.24□□□□□ -2.21
UBXN1Q04323 Y_RNA.653-201ENST00000459091 95 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 RNU7-95P-201ENST00000459222 64 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 RPS27P22-201ENST00000478056 241 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 RNU6-470P-201ENST00000515954 104 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 RNU6-264P-201ENST00000517134 104 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.24□□□□□ -2.21
UBXN1Q04323 AC080078.3-201ENST00000605407 463 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 AL022345.2-201ENST00000606307 135 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 BX284668.6-201ENST00000606899 438 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 AL132765.2-201ENST00000610812 351 ntBASIC1.24□□□□□ -2.21
UBXN1Q04323 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.24□□□□□ -2.21
UBXN1Q04323 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
UBXN1Q04323 AC018630.2-201ENST00000534866 2403 ntBASIC1.23□□□□□ -2.21
UBXN1Q04323 MIR410-201ENST00000362222 80 ntBASIC1.23□□□□□ -2.21
UBXN1Q04323 RNU6-1297P-201ENST00000384415 104 ntBASIC1.23□□□□□ -2.21
UBXN1Q04323 Y_RNA.592-201ENST00000410274 109 ntBASIC1.23□□□□□ -2.21
UBXN1Q04323 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.23□□□□□ -2.21
UBXN1Q04323 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.23□□□□□ -2.21
UBXN1Q04323 RAB28P5-201ENST00000427490 651 ntBASIC1.23□□□□□ -2.21
UBXN1Q04323 AC009474.2-201ENST00000451383 136 ntBASIC1.23□□□□□ -2.21
UBXN1Q04323 RNU6-625P-201ENST00000459412 107 ntBASIC1.23□□□□□ -2.21
UBXN1Q04323 AC093852.1-201ENST00000503587 266 ntBASIC1.23□□□□□ -2.21
UBXN1Q04323 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.23□□□□□ -2.21
UBXN1Q04323 MIR1302-1-201ENST00000637932 143 ntBASIC1.23□□□□□ -2.21
UBXN1Q04323 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
UBXN1Q04323 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
UBXN1Q04323 RNU4-76P-201ENST00000364509 141 ntBASIC1.22□□□□□ -2.21
UBXN1Q04323 Y_RNA.387-201ENST00000383918 102 ntBASIC1.22□□□□□ -2.21
UBXN1Q04323 MIR625-201ENST00000385047 85 ntBASIC1.22□□□□□ -2.21
UBXN1Q04323 MIR559-201ENST00000385188 96 ntBASIC1.22□□□□□ -2.21
UBXN1Q04323 SNORA69.1-201ENST00000390904 137 ntBASIC1.22□□□□□ -2.21
UBXN1Q04323 MTND4P28-201ENST00000426217 387 ntBASIC1.22□□□□□ -2.21
UBXN1Q04323 STAG3L5P-204ENST00000443759 179 ntBASIC1.22□□□□□ -2.21
UBXN1Q04323 ELOCP24-201ENST00000456370 334 ntBASIC1.22□□□□□ -2.21
UBXN1Q04323 OR2A41P-201ENST00000473586 105 ntBASIC1.22□□□□□ -2.21
UBXN1Q04323 AC097462.1-201ENST00000514125 324 ntBASIC1.22□□□□□ -2.21
UBXN1Q04323 SNORA28-201ENST00000606769 126 ntBASIC1.22□□□□□ -2.21
UBXN1Q04323 AL353770.2-201ENST00000620024 78 ntBASIC1.22□□□□□ -2.21
UBXN1Q04323 U6.115-201ENST00000636045 103 ntBASIC1.22□□□□□ -2.21
UBXN1Q04323 MIR3674-201ENST00000636576 68 ntBASIC1.22□□□□□ -2.21
UBXN1Q04323 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
UBXN1Q04323 RNY4P36-201ENST00000391116 96 ntBASIC1.21□□□□□ -2.22
UBXN1Q04323 MTCYBP4-201ENST00000401524 249 ntBASIC1.21□□□□□ -2.22
UBXN1Q04323 SNORA11.2-201ENST00000408318 127 ntBASIC1.21□□□□□ -2.22
UBXN1Q04323 MRPL35P3-201ENST00000421557 364 ntBASIC1.21□□□□□ -2.22
UBXN1Q04323 RNU7-169P-201ENST00000459456 61 ntBASIC1.21□□□□□ -2.22
UBXN1Q04323 SNORD116-28-201ENST00000516123 91 ntBASIC1.21□□□□□ -2.22
UBXN1Q04323 RNU6-875P-201ENST00000516488 106 ntBASIC1.21□□□□□ -2.22
UBXN1Q04323 RNU6-922P-201ENST00000516753 99 ntBASIC1.21□□□□□ -2.22
UBXN1Q04323 Y_RNA.718-201ENST00000517110 102 ntBASIC1.21□□□□□ -2.22
UBXN1Q04323 MIR2355-201ENST00000517199 87 ntBASIC1.21□□□□□ -2.22
UBXN1Q04323 MIR4801-201ENST00000582704 82 ntBASIC1.21□□□□□ -2.22
UBXN1Q04323 AL513534.2-201ENST00000603836 250 ntBASIC1.21□□□□□ -2.22
UBXN1Q04323 RBM11P1-201ENST00000604951 799 ntBASIC1.21□□□□□ -2.22
UBXN1Q04323 AC106754.2-201ENST00000623006 233 ntBASIC1.21□□□□□ -2.22
UBXN1Q04323 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.21□□□□□ -2.22
UBXN1Q04323 SNORA27.1-201ENST00000362604 124 ntBASIC1.2□□□□□ -2.22
UBXN1Q04323 RNU1-124P-201ENST00000363861 145 ntBASIC1.2□□□□□ -2.22
UBXN1Q04323 RNU6-961P-201ENST00000363893 105 ntBASIC1.2□□□□□ -2.22
UBXN1Q04323 Y_RNA.259-201ENST00000364619 101 ntBASIC1.2□□□□□ -2.22
UBXN1Q04323 RNU6-407P-201ENST00000365280 104 ntBASIC1.2□□□□□ -2.22
UBXN1Q04323 MIR222-201ENST00000384992 110 ntBASIC1.2□□□□□ -2.22
UBXN1Q04323 RNU11-5P-201ENST00000391216 129 ntBASIC1.2□□□□□ -2.22
UBXN1Q04323 AC018865.2-201ENST00000423631 129 ntBASIC1.2□□□□□ -2.22
UBXN1Q04323 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.2□□□□□ -2.22
UBXN1Q04323 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.2□□□□□ -2.22
UBXN1Q04323 RPS23P4-201ENST00000487908 423 ntBASIC1.2□□□□□ -2.22
UBXN1Q04323 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.2□□□□□ -2.22
UBXN1Q04323 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.2□□□□□ -2.22
UBXN1Q04323 RNU6-408P-201ENST00000515910 100 ntBASIC1.2□□□□□ -2.22
UBXN1Q04323 RNA5SP20-201ENST00000515976 84 ntBASIC1.2□□□□□ -2.22
UBXN1Q04323 RNU6-507P-201ENST00000516045 100 ntBASIC1.2□□□□□ -2.22
UBXN1Q04323 RNU7-172P-201ENST00000517125 64 ntBASIC1.2□□□□□ -2.22
UBXN1Q04323 AC055872.1-201ENST00000570978 278 ntBASIC1.2□□□□□ -2.22
UBXN1Q04323 AL355375.2-201ENST00000574825 175 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms