Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 MIR544B-201ENST00000582372 78 ntBASIC-1□□□□□ -2.57
SCN7AQ01118 AL442067.1-201ENST00000613261 223 ntBASIC-1□□□□□ -2.57
SCN7AQ01118 AC010608.3-201ENST00000625048 527 ntBASIC-1□□□□□ -2.57
SCN7AQ01118 SNORD114-14-201ENST00000362723 75 ntBASIC-1□□□□□ -2.57
SCN7AQ01118 RNU6-1266P-201ENST00000362794 105 ntBASIC-1□□□□□ -2.57
SCN7AQ01118 MIR516B2-201ENST00000385190 85 ntBASIC-1□□□□□ -2.57
SCN7AQ01118 AC098592.1-201ENST00000419352 333 ntBASIC-1□□□□□ -2.57
SCN7AQ01118 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1□□□□□ -2.57
SCN7AQ01118 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1□□□□□ -2.57
SCN7AQ01118 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1□□□□□ -2.57
SCN7AQ01118 U8.21-201ENST00000459536 136 ntBASIC-1□□□□□ -2.57
SCN7AQ01118 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1□□□□□ -2.57
SCN7AQ01118 AC097462.1-201ENST00000514125 324 ntBASIC-1□□□□□ -2.57
SCN7AQ01118 RNA5SP54-201ENST00000516951 92 ntBASIC-1□□□□□ -2.57
SCN7AQ01118 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1□□□□□ -2.57
SCN7AQ01118 MIR4436A-201ENST00000585278 85 ntBASIC-1□□□□□ -2.57
SCN7AQ01118 AC121334.2-201ENST00000605387 271 ntBASIC-1□□□□□ -2.57
SCN7AQ01118 SNORA43.4-201ENST00000629559 138 ntBASIC-1□□□□□ -2.57
SCN7AQ01118 RNU6-137P-201ENST00000363680 108 ntBASIC-1.01□□□□□ -2.57
SCN7AQ01118 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.01□□□□□ -2.57
SCN7AQ01118 MIR196A1-201ENST00000388006 70 ntBASIC-1.01□□□□□ -2.57
SCN7AQ01118 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.01□□□□□ -2.57
SCN7AQ01118 MTCO3P19-201ENST00000415864 321 ntBASIC-1.01□□□□□ -2.57
SCN7AQ01118 AL365184.2-201ENST00000431139 435 ntBASIC-1.01□□□□□ -2.57
SCN7AQ01118 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.01□□□□□ -2.57
SCN7AQ01118 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.01□□□□□ -2.57
SCN7AQ01118 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.01□□□□□ -2.57
SCN7AQ01118 AC120024.3-201ENST00000603167 156 ntBASIC-1.01□□□□□ -2.57
SCN7AQ01118 MIR7107-201ENST00000611489 80 ntBASIC-1.01□□□□□ -2.57
SCN7AQ01118 MIR8084-201ENST00000614105 89 ntBASIC-1.01□□□□□ -2.57
SCN7AQ01118 RNU6-873P-201ENST00000363833 107 ntBASIC-1.02□□□□□ -2.57
SCN7AQ01118 RNU6-61P-201ENST00000365528 109 ntBASIC-1.02□□□□□ -2.57
SCN7AQ01118 MIR587-201ENST00000384845 96 ntBASIC-1.02□□□□□ -2.57
SCN7AQ01118 MIR15B-201ENST00000385045 98 ntBASIC-1.02□□□□□ -2.57
SCN7AQ01118 RNU4-30P-201ENST00000410245 143 ntBASIC-1.02□□□□□ -2.57
SCN7AQ01118 RNU6-387P-201ENST00000411331 105 ntBASIC-1.02□□□□□ -2.57
SCN7AQ01118 MCFD2P1-201ENST00000417812 300 ntBASIC-1.02□□□□□ -2.57
SCN7AQ01118 CALM2P2-201ENST00000428512 440 ntBASIC-1.02□□□□□ -2.57
SCN7AQ01118 AC010486.3-201ENST00000511602 785 ntBASIC-1.02□□□□□ -2.57
SCN7AQ01118 RNU7-172P-201ENST00000517125 64 ntBASIC-1.02□□□□□ -2.57
SCN7AQ01118 MIR3152-201ENST00000579801 74 ntBASIC-1.02□□□□□ -2.57
SCN7AQ01118 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.02□□□□□ -2.57
SCN7AQ01118 AL139022.2-201ENST00000606934 443 ntBASIC-1.02□□□□□ -2.57
SCN7AQ01118 AC072039.2-201ENST00000608883 439 ntBASIC-1.02□□□□□ -2.57
SCN7AQ01118 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.02□□□□□ -2.57
SCN7AQ01118 AC097460.3-201ENST00000623099 442 ntBASIC-1.02□□□□□ -2.57
SCN7AQ01118 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.03□□□□□ -2.57
SCN7AQ01118 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.03□□□□□ -2.57
SCN7AQ01118 SNORD123-201ENST00000459473 70 ntBASIC-1.03□□□□□ -2.57
SCN7AQ01118 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.03□□□□□ -2.57
SCN7AQ01118 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.03□□□□□ -2.57
SCN7AQ01118 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 MIR1284-201ENST00000408337 120 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.04□□□□□ -2.58
SCN7AQ01118 AC092447.3-201ENST00000426027 686 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.04□□□□□ -2.58
SCN7AQ01118 RNU6-1037P-201ENST00000459571 107 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.04□□□□□ -2.58
SCN7AQ01118 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 RNU6-135P-201ENST00000516769 101 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 AC018448.1-201ENST00000552843 316 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 AC006600.1-201ENST00000572529 153 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 MIR3118-1-201ENST00000581787 76 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 MIR4762-201ENST00000585261 75 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 AC137590.2-201ENST00000619709 240 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 MIR655-201ENST00000362159 97 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 SNORD45.3-201ENST00000363836 72 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.04□□□□□ -2.58
SCN7AQ01118 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.04□□□□□ -2.58
SCN7AQ01118 AC109327.2-201ENST00000448339 378 ntBASIC-1.04□□□□□ -2.58
SCN7AQ01118 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.04□□□□□ -2.58
SCN7AQ01118 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.05□□□□□ -2.58
SCN7AQ01118 RNU6-245P-201ENST00000384020 107 ntBASIC-1.05□□□□□ -2.58
SCN7AQ01118 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.05□□□□□ -2.58
SCN7AQ01118 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.05□□□□□ -2.58
SCN7AQ01118 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.05□□□□□ -2.58
SCN7AQ01118 USP9YP25-201ENST00000457708 443 ntBASIC-1.05□□□□□ -2.58
SCN7AQ01118 AC116353.2-201ENST00000505332 712 ntBASIC-1.05□□□□□ -2.58
SCN7AQ01118 AC010598.1-201ENST00000510378 103 ntBASIC-1.05□□□□□ -2.58
SCN7AQ01118 AC046134.1-201ENST00000514454 666 ntBASIC-1.05□□□□□ -2.58
SCN7AQ01118 AC068587.4-201ENST00000533893 186 ntBASIC-1.05□□□□□ -2.58
SCN7AQ01118 AC138749.4-201ENST00000563970 127 ntBASIC-1.05□□□□□ -2.58
SCN7AQ01118 AC073539.2-201ENST00000597113 165 ntBASIC-1.05□□□□□ -2.58
SCN7AQ01118 AC068137.4-201ENST00000638485 296 ntBASIC-1.05□□□□□ -2.58
SCN7AQ01118 SNORD68-201ENST00000363214 84 ntBASIC-1.06□□□□□ -2.58
SCN7AQ01118 RNU6-480P-201ENST00000384332 107 ntBASIC-1.06□□□□□ -2.58
SCN7AQ01118 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.06□□□□□ -2.58
SCN7AQ01118 AL031274.1-201ENST00000450334 232 ntBASIC-1.06□□□□□ -2.58
SCN7AQ01118 RNU7-185P-201ENST00000459215 60 ntBASIC-1.06□□□□□ -2.58
SCN7AQ01118 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.06□□□□□ -2.58
SCN7AQ01118 AC123904.2-201ENST00000548059 300 ntBASIC-1.06□□□□□ -2.58
SCN7AQ01118 AC108747.1-201ENST00000609508 535 ntBASIC-1.06□□□□□ -2.58
SCN7AQ01118 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.07□□□□□ -2.58
SCN7AQ01118 SNORA24.1-201ENST00000384401 135 ntBASIC-1.07□□□□□ -2.58
SCN7AQ01118 SNORA75.1-201ENST00000391130 148 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms