Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC112492.4-201ENST00000456549 352 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 RPS26P45-201ENST00000471748 340 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 AC097462.1-201ENST00000514125 324 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 SNORA25.10-201ENST00000515926 124 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 RNU6-475P-201ENST00000516073 104 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 RNU2-12P-201ENST00000517216 168 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 AC040926.1-201ENST00000530195 238 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 AL390123.1-201ENST00000603216 237 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CDK3Q00526 Y_RNA.128-201ENST00000363391 112 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 RNU6-414P-201ENST00000363705 104 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 SNORA4.2-201ENST00000365313 147 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 SNORD14.1-201ENST00000365609 90 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 Y_RNA.424-201ENST00000384063 103 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CDK3Q00526 RNU6-360P-201ENST00000390944 104 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 MIR873-201ENST00000401120 77 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 MIR1302-11-201ENST00000408051 138 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 MIR1302-9-201ENST00000408365 138 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 MIR1302-10-201ENST00000408734 138 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 AL606517.2-201ENST00000442855 241 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 SUMO1P2-201ENST00000452524 304 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 RNU7-172P-201ENST00000517125 64 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 CBX3P4-201ENST00000538909 354 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 MIR3122-201ENST00000577243 73 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 AC073413.2-201ENST00000604332 360 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 AL121655.1-201ENST00000605811 308 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 AC005828.6-201ENST00000606610 232 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 Y_RNA.772-201ENST00000606692 102 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 MIR1302-2-201ENST00000607096 138 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 AC010205.1-201ENST00000616668 449 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 AC134503.1-201ENST00000633048 54 ntBASIC1.65□□□□□ -2.15
CDK3Q00526 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CDK3Q00526 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CDK3Q00526 Y_RNA.28-201ENST00000362554 111 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 RNU1-22P-201ENST00000363334 158 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 Y_RNA.124-201ENST00000363339 93 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 Y_RNA.148-201ENST00000363557 117 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 Y_RNA.458-201ENST00000384240 102 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CDK3Q00526 RPL21P1-201ENST00000399532 476 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 RNU2-54P-201ENST00000410299 190 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 COX6CP10-201ENST00000416832 224 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.64□□□□□ -2.15
CDK3Q00526 snoU13.27-201ENST00000459278 104 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 AC093852.1-201ENST00000503587 266 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 AC025465.3-201ENST00000510570 311 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.64□□□□□ -2.15
CDK3Q00526 AC024614.2-201ENST00000577584 372 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 AC022217.4-201ENST00000604389 163 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 MIR8074-201ENST00000615081 81 ntBASIC1.64□□□□□ -2.15
CDK3Q00526 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.64□□□□□ -2.15
CDK3Q00526 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.64□□□□□ -2.15
CDK3Q00526 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.63□□□□□ -2.15
CDK3Q00526 SNORD115-30-201ENST00000364117 82 ntBASIC1.63□□□□□ -2.15
CDK3Q00526 Y_RNA.230-201ENST00000364348 109 ntBASIC1.63□□□□□ -2.15
CDK3Q00526 RNU4-50P-201ENST00000364361 141 ntBASIC1.63□□□□□ -2.15
CDK3Q00526 MIR30A-201ENST00000385092 71 ntBASIC1.63□□□□□ -2.15
CDK3Q00526 RPS27P1-201ENST00000450552 247 ntBASIC1.63□□□□□ -2.15
CDK3Q00526 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.63□□□□□ -2.15
CDK3Q00526 RNU6-155P-201ENST00000516347 100 ntBASIC1.63□□□□□ -2.15
CDK3Q00526 SNORA44.1-201ENST00000517031 108 ntBASIC1.63□□□□□ -2.15
CDK3Q00526 RNU6-988P-201ENST00000519081 107 ntBASIC1.63□□□□□ -2.15
CDK3Q00526 RPL21P9-201ENST00000556149 474 ntBASIC1.63□□□□□ -2.15
CDK3Q00526 MIR4709-201ENST00000577272 72 ntBASIC1.63□□□□□ -2.15
CDK3Q00526 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.63□□□□□ -2.15
CDK3Q00526 Y_RNA.446-201ENST00000384178 104 ntBASIC1.62□□□□□ -2.15
CDK3Q00526 Y_RNA.471-201ENST00000384312 102 ntBASIC1.62□□□□□ -2.15
CDK3Q00526 RNU6-376P-201ENST00000384731 106 ntBASIC1.62□□□□□ -2.15
CDK3Q00526 SNORA17.3-201ENST00000391159 129 ntBASIC1.62□□□□□ -2.15
CDK3Q00526 MIR548P-201ENST00000408336 84 ntBASIC1.62□□□□□ -2.15
CDK3Q00526 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.62□□□□□ -2.15
CDK3Q00526 FTH1P12-201ENST00000432137 551 ntBASIC1.62□□□□□ -2.15
CDK3Q00526 RNU7-34P-201ENST00000459394 64 ntBASIC1.62□□□□□ -2.15
CDK3Q00526 U8.20-201ENST00000459445 131 ntBASIC1.62□□□□□ -2.15
CDK3Q00526 RNU7-94P-201ENST00000459576 63 ntBASIC1.62□□□□□ -2.15
CDK3Q00526 RPS26P55-201ENST00000471178 356 ntBASIC1.62□□□□□ -2.15
CDK3Q00526 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
CDK3Q00526 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CDK3Q00526 AC018630.2-201ENST00000534866 2403 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 AC100821.1-201ENST00000523153 2479 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 RNU6-324P-201ENST00000363957 106 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 RNU6-457P-201ENST00000363999 107 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 RNU6-1175P-201ENST00000365200 107 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 Y_RNA.439-201ENST00000384119 94 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 AL031003.1-201ENST00000404229 172 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 MIR1267-201ENST00000408723 78 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 RNU6-1199P-201ENST00000411249 104 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 AC010154.1-201ENST00000425857 269 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 AC245047.3-201ENST00000429428 127 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 HSPE1P21-201ENST00000438283 308 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 RPEP5-201ENST00000441137 268 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 RNU6-1278P-201ENST00000516130 107 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 RNU6-966P-201ENST00000516479 104 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.61□□□□□ -2.15
CDK3Q00526 AL929325.1-201ENST00000603096 117 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 AC124312.5-201ENST00000604451 268 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 AC022441.3-201ENST00000605737 136 ntBASIC1.61□□□□□ -2.15
CDK3Q00526 AC127459.3-201ENST00000624328 466 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms