Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.86□□□□□ -2.27
CBX1P83916 AC074133.1-201ENST00000515696 183 ntBASIC0.86□□□□□ -2.27
CBX1P83916 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.86□□□□□ -2.27
CBX1P83916 AP002001.1-203ENST00000534002 267 ntBASIC0.86□□□□□ -2.27
CBX1P83916 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.86□□□□□ -2.27
CBX1P83916 AL357075.2-201ENST00000614906 189 ntBASIC0.86□□□□□ -2.27
CBX1P83916 AC104260.1-201ENST00000616660 539 ntBASIC0.86□□□□□ -2.27
CBX1P83916 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
CBX1P83916 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
CBX1P83916 MIRLET7C-201ENST00000362160 84 ntBASIC0.85□□□□□ -2.27
CBX1P83916 Y_RNA.295-201ENST00000364918 102 ntBASIC0.85□□□□□ -2.27
CBX1P83916 Y_RNA.301-201ENST00000364990 103 ntBASIC0.85□□□□□ -2.27
CBX1P83916 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CBX1P83916 Y_RNA.498-201ENST00000384460 102 ntBASIC0.85□□□□□ -2.27
CBX1P83916 MIR520G-201ENST00000385064 90 ntBASIC0.85□□□□□ -2.27
CBX1P83916 UBE2V1P7-201ENST00000446395 340 ntBASIC0.85□□□□□ -2.27
CBX1P83916 LINC01399-202ENST00000458450 244 ntBASIC0.85□□□□□ -2.27
CBX1P83916 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
CBX1P83916 AC068790.6-201ENST00000602558 258 ntBASIC0.85□□□□□ -2.27
CBX1P83916 AC127459.3-201ENST00000624328 466 ntBASIC0.85□□□□□ -2.27
CBX1P83916 RNU6-879P-201ENST00000364328 108 ntBASIC0.84□□□□□ -2.27
CBX1P83916 RNU4-12P-201ENST00000365233 139 ntBASIC0.84□□□□□ -2.27
CBX1P83916 MIR873-201ENST00000401120 77 ntBASIC0.84□□□□□ -2.27
CBX1P83916 PCNPP5-201ENST00000452246 481 ntBASIC0.84□□□□□ -2.27
CBX1P83916 AC233266.1-201ENST00000454518 96 ntBASIC0.84□□□□□ -2.27
CBX1P83916 AL049830.1-201ENST00000468034 425 ntBASIC0.84□□□□□ -2.27
CBX1P83916 AC005840.1-201ENST00000498412 377 ntBASIC0.84□□□□□ -2.27
CBX1P83916 AC018448.1-201ENST00000552843 316 ntBASIC0.84□□□□□ -2.27
CBX1P83916 AC018462.2-201ENST00000605375 395 ntBASIC0.84□□□□□ -2.27
CBX1P83916 AC080078.3-201ENST00000605407 463 ntBASIC0.84□□□□□ -2.27
CBX1P83916 AC005014.2-201ENST00000607795 599 ntBASIC0.84□□□□□ -2.27
CBX1P83916 AC242852.1-201ENST00000612151 96 ntBASIC0.84□□□□□ -2.27
CBX1P83916 AC244015.1-201ENST00000622301 99 ntBASIC0.84□□□□□ -2.27
CBX1P83916 U6.115-201ENST00000636045 103 ntBASIC0.84□□□□□ -2.27
CBX1P83916 AC008163.1-202ENST00000636004 2889 ntBASIC0.84□□□□□ -2.28
CBX1P83916 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CBX1P83916 MIR410-201ENST00000362222 80 ntBASIC0.83□□□□□ -2.28
CBX1P83916 RNA5SP361-201ENST00000362686 118 ntBASIC0.83□□□□□ -2.28
CBX1P83916 Y_RNA.436-201ENST00000384097 102 ntBASIC0.83□□□□□ -2.28
CBX1P83916 RNU5A-5P-201ENST00000411054 116 ntBASIC0.83□□□□□ -2.28
CBX1P83916 AC114482.1-201ENST00000418010 247 ntBASIC0.83□□□□□ -2.28
CBX1P83916 MTCYBP10-201ENST00000424905 650 ntBASIC0.83□□□□□ -2.28
CBX1P83916 AC093534.1-201ENST00000504977 132 ntBASIC0.83□□□□□ -2.28
CBX1P83916 RNU4-49P-201ENST00000516080 140 ntBASIC0.83□□□□□ -2.28
CBX1P83916 AL358944.1-201ENST00000528537 144 ntBASIC0.83□□□□□ -2.28
CBX1P83916 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
CBX1P83916 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.83□□□□□ -2.28
CBX1P83916 SNORD114-27-201ENST00000363766 70 ntBASIC0.82□□□□□ -2.28
CBX1P83916 RNU6-117P-201ENST00000365415 107 ntBASIC0.82□□□□□ -2.28
CBX1P83916 RNU6-969P-201ENST00000383900 105 ntBASIC0.82□□□□□ -2.28
CBX1P83916 Y_RNA.557-201ENST00000384680 107 ntBASIC0.82□□□□□ -2.28
CBX1P83916 SUMO1P2-201ENST00000452524 304 ntBASIC0.82□□□□□ -2.28
CBX1P83916 RNU6-625P-201ENST00000459412 107 ntBASIC0.82□□□□□ -2.28
CBX1P83916 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.82□□□□□ -2.28
CBX1P83916 RPS26P48-201ENST00000491713 339 ntBASIC0.82□□□□□ -2.28
CBX1P83916 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.82□□□□□ -2.28
CBX1P83916 MTND5P5-201ENST00000503764 376 ntBASIC0.82□□□□□ -2.28
CBX1P83916 AC026782.1-201ENST00000512952 449 ntBASIC0.82□□□□□ -2.28
CBX1P83916 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.82□□□□□ -2.28
CBX1P83916 Y_RNA.682-201ENST00000516457 100 ntBASIC0.82□□□□□ -2.28
CBX1P83916 AC090142.3-201ENST00000519012 385 ntBASIC0.82□□□□□ -2.28
CBX1P83916 AC105029.1-201ENST00000520250 669 ntBASIC0.82□□□□□ -2.28
CBX1P83916 MIR4498-201ENST00000577599 66 ntBASIC0.82□□□□□ -2.28
CBX1P83916 AC004832.4-201ENST00000608952 331 ntBASIC0.82□□□□□ -2.28
CBX1P83916 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CBX1P83916 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.81□□□□□ -2.28
CBX1P83916 Y_RNA.2-201ENST00000362330 96 ntBASIC0.81□□□□□ -2.28
CBX1P83916 RNU4-41P-201ENST00000364426 143 ntBASIC0.81□□□□□ -2.28
CBX1P83916 Y_RNA.473-201ENST00000384333 102 ntBASIC0.81□□□□□ -2.28
CBX1P83916 MIR942-201ENST00000401111 86 ntBASIC0.81□□□□□ -2.28
CBX1P83916 MIR891A-201ENST00000401237 79 ntBASIC0.81□□□□□ -2.28
CBX1P83916 RNA5SP475-201ENST00000410568 110 ntBASIC0.81□□□□□ -2.28
CBX1P83916 RNU2-64P-201ENST00000411315 191 ntBASIC0.81□□□□□ -2.28
CBX1P83916 AC074085.1-201ENST00000413598 418 ntBASIC0.81□□□□□ -2.28
CBX1P83916 MTND5P15-201ENST00000434246 349 ntBASIC0.81□□□□□ -2.28
CBX1P83916 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.81□□□□□ -2.28
CBX1P83916 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.81□□□□□ -2.28
CBX1P83916 RPS29P25-201ENST00000481709 171 ntBASIC0.81□□□□□ -2.28
CBX1P83916 SNORD111.1-201ENST00000516421 86 ntBASIC0.81□□□□□ -2.28
CBX1P83916 RNU6-1016P-201ENST00000516689 94 ntBASIC0.81□□□□□ -2.28
CBX1P83916 RNU6-1096P-201ENST00000517089 102 ntBASIC0.81□□□□□ -2.28
CBX1P83916 FAM106DP-201ENST00000586416 501 ntBASIC0.81□□□□□ -2.28
CBX1P83916 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
CBX1P83916 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.81□□□□□ -2.28
CBX1P83916 MIR3674-201ENST00000636576 68 ntBASIC0.81□□□□□ -2.28
CBX1P83916 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CBX1P83916 RNU6-874P-201ENST00000362390 105 ntBASIC0.8□□□□□ -2.28
CBX1P83916 RNY1P16-201ENST00000363063 111 ntBASIC0.8□□□□□ -2.28
CBX1P83916 RNY1P10-201ENST00000363268 113 ntBASIC0.8□□□□□ -2.28
CBX1P83916 RNU6-833P-201ENST00000363486 107 ntBASIC0.8□□□□□ -2.28
CBX1P83916 Y_RNA.453-201ENST00000384223 109 ntBASIC0.8□□□□□ -2.28
CBX1P83916 MIR526A1-201ENST00000384897 85 ntBASIC0.8□□□□□ -2.28
CBX1P83916 Y_RNA.594-201ENST00000410373 140 ntBASIC0.8□□□□□ -2.28
CBX1P83916 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.8□□□□□ -2.28
CBX1P83916 AL353997.1-201ENST00000432936 108 ntBASIC0.8□□□□□ -2.28
CBX1P83916 Z98949.2-201ENST00000440996 144 ntBASIC0.8□□□□□ -2.28
CBX1P83916 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.8□□□□□ -2.28
CBX1P83916 AC245047.8-201ENST00000456455 284 ntBASIC0.8□□□□□ -2.28
CBX1P83916 RNU7-90P-201ENST00000459216 62 ntBASIC0.8□□□□□ -2.28
CBX1P83916 Y_RNA.638-201ENST00000459374 113 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms