Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 RNU6-934P-201ENST00000365154 107 ntBASIC-0.34□□□□□ -2.46
LSM6P62312 SNORA8.2-201ENST00000384372 139 ntBASIC-0.34□□□□□ -2.46
LSM6P62312 SNORA75.6-201ENST00000391318 127 ntBASIC-0.34□□□□□ -2.46
LSM6P62312 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.34□□□□□ -2.46
LSM6P62312 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
LSM6P62312 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.34□□□□□ -2.46
LSM6P62312 SNORD123-201ENST00000459473 70 ntBASIC-0.34□□□□□ -2.46
LSM6P62312 MTCO3P38-201ENST00000468910 766 ntBASIC-0.34□□□□□ -2.46
LSM6P62312 AC091885.1-201ENST00000506658 268 ntBASIC-0.34□□□□□ -2.46
LSM6P62312 MTND4P7-201ENST00000523876 130 ntBASIC-0.34□□□□□ -2.46
LSM6P62312 AC104576.1-201ENST00000524225 88 ntBASIC-0.34□□□□□ -2.46
LSM6P62312 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.34□□□□□ -2.46
LSM6P62312 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.34□□□□□ -2.46
LSM6P62312 AC087683.1-201ENST00000591187 441 ntBASIC-0.34□□□□□ -2.46
LSM6P62312 AP001506.1-201ENST00000615444 211 ntBASIC-0.34□□□□□ -2.46
LSM6P62312 AC010608.3-201ENST00000625048 527 ntBASIC-0.34□□□□□ -2.46
LSM6P62312 SNORA27.1-201ENST00000362604 124 ntBASIC-0.35□□□□□ -2.47
LSM6P62312 RNU6-541P-201ENST00000384709 110 ntBASIC-0.35□□□□□ -2.47
LSM6P62312 MIR122-201ENST00000385044 85 ntBASIC-0.35□□□□□ -2.47
LSM6P62312 MT-TN-201ENST00000387400 73 ntBASIC-0.35□□□□□ -2.47
LSM6P62312 RNU2-59P-201ENST00000410482 191 ntBASIC-0.35□□□□□ -2.47
LSM6P62312 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.35□□□□□ -2.47
LSM6P62312 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.35□□□□□ -2.47
LSM6P62312 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.35□□□□□ -2.47
LSM6P62312 RPL23AP54-201ENST00000495129 419 ntBASIC-0.35□□□□□ -2.47
LSM6P62312 MTCO1P29-201ENST00000496868 288 ntBASIC-0.35□□□□□ -2.47
LSM6P62312 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.35□□□□□ -2.47
LSM6P62312 AC093303.1-201ENST00000514549 295 ntBASIC-0.35□□□□□ -2.47
LSM6P62312 CPDP1-201ENST00000579660 283 ntBASIC-0.35□□□□□ -2.47
LSM6P62312 MIR4804-201ENST00000581683 73 ntBASIC-0.35□□□□□ -2.47
LSM6P62312 AC022306.3-201ENST00000619930 550 ntBASIC-0.35□□□□□ -2.47
LSM6P62312 AC067863.3-201ENST00000624172 122 ntBASIC-0.35□□□□□ -2.47
LSM6P62312 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.35□□□□□ -2.47
LSM6P62312 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
LSM6P62312 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
LSM6P62312 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.36□□□□□ -2.47
LSM6P62312 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
LSM6P62312 SNORD100-201ENST00000408573 76 ntBASIC-0.36□□□□□ -2.47
LSM6P62312 RNU6-325P-201ENST00000411132 105 ntBASIC-0.36□□□□□ -2.47
LSM6P62312 MTND1P26-201ENST00000440488 538 ntBASIC-0.36□□□□□ -2.47
LSM6P62312 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.36□□□□□ -2.47
LSM6P62312 AP003461.1-201ENST00000528866 78 ntBASIC-0.36□□□□□ -2.47
LSM6P62312 MIR4762-201ENST00000585261 75 ntBASIC-0.36□□□□□ -2.47
LSM6P62312 AL022161.1-201ENST00000604390 213 ntBASIC-0.36□□□□□ -2.47
LSM6P62312 RNU6-580P-201ENST00000365159 107 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 RNU6-302P-201ENST00000365249 107 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 RNU6-514P-201ENST00000384208 107 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.37□□□□□ -2.47
LSM6P62312 Z99497.1-201ENST00000421282 135 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.37□□□□□ -2.47
LSM6P62312 AC133104.1-201ENST00000429100 218 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 MTND4P32-201ENST00000437189 1237 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 AL137792.2-201ENST00000443484 235 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 AL033528.1-201ENST00000453780 140 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 AC018710.1-201ENST00000506509 158 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 RNU6-107P-201ENST00000516643 102 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 AC091144.1-201ENST00000519573 138 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.37□□□□□ -2.47
LSM6P62312 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.37□□□□□ -2.47
LSM6P62312 AL355375.2-201ENST00000574825 175 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 PIGPP4-201ENST00000584447 307 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 MIR4743-201ENST00000584576 69 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 AC006504.8-201ENST00000621046 635 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 AC127459.3-201ENST00000624328 466 ntBASIC-0.37□□□□□ -2.47
LSM6P62312 RNU7-180P-201ENST00000459240 63 ntBASIC-0.38□□□□□ -2.47
LSM6P62312 AC104692.1-201ENST00000472406 90 ntBASIC-0.38□□□□□ -2.47
LSM6P62312 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.38□□□□□ -2.47
LSM6P62312 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.38□□□□□ -2.47
LSM6P62312 AL157687.1-201ENST00000554853 619 ntBASIC-0.38□□□□□ -2.47
LSM6P62312 MIR5583-1-201ENST00000580941 59 ntBASIC-0.38□□□□□ -2.47
LSM6P62312 MIR4305-201ENST00000583252 102 ntBASIC-0.38□□□□□ -2.47
LSM6P62312 AC012433.1-201ENST00000588916 398 ntBASIC-0.38□□□□□ -2.47
LSM6P62312 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.38□□□□□ -2.47
LSM6P62312 AF250324.2-201ENST00000608299 610 ntBASIC-0.38□□□□□ -2.47
LSM6P62312 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.38□□□□□ -2.47
LSM6P62312 AL357075.2-201ENST00000614906 189 ntBASIC-0.38□□□□□ -2.47
LSM6P62312 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.39□□□□□ -2.47
LSM6P62312 RNU6-159P-201ENST00000391080 106 ntBASIC-0.39□□□□□ -2.47
LSM6P62312 RNA5SP127-201ENST00000411051 133 ntBASIC-0.39□□□□□ -2.47
LSM6P62312 AL353997.1-201ENST00000432936 108 ntBASIC-0.39□□□□□ -2.47
LSM6P62312 HMGN2P32-201ENST00000444648 269 ntBASIC-0.39□□□□□ -2.47
LSM6P62312 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.39□□□□□ -2.47
LSM6P62312 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.39□□□□□ -2.47
LSM6P62312 RNU6-189P-201ENST00000516120 101 ntBASIC-0.39□□□□□ -2.47
LSM6P62312 RNA5SP480-201ENST00000516840 109 ntBASIC-0.39□□□□□ -2.47
LSM6P62312 HULC.1-201ENST00000612720 240 ntBASIC-0.39□□□□□ -2.47
LSM6P62312 RNU6-214P-201ENST00000384130 107 ntBASIC-0.4□□□□□ -2.47
LSM6P62312 AL590002.1-201ENST00000406554 418 ntBASIC-0.4□□□□□ -2.47
LSM6P62312 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.4□□□□□ -2.47
LSM6P62312 MTCO2P11-201ENST00000431069 680 ntBASIC-0.4□□□□□ -2.47
LSM6P62312 AL359672.1-201ENST00000442302 409 ntBASIC-0.4□□□□□ -2.47
LSM6P62312 RNU7-56P-201ENST00000458744 62 ntBASIC-0.4□□□□□ -2.47
LSM6P62312 MIR4771-2-201ENST00000577758 74 ntBASIC-0.4□□□□□ -2.47
LSM6P62312 MIR4771-1-201ENST00000582617 74 ntBASIC-0.4□□□□□ -2.47
LSM6P62312 AP000753.3-201ENST00000604083 169 ntBASIC-0.4□□□□□ -2.47
LSM6P62312 AL158209.2-201ENST00000619266 216 ntBASIC-0.4□□□□□ -2.47
LSM6P62312 RNU6-82P-201ENST00000363970 107 ntBASIC-0.41□□□□□ -2.48
LSM6P62312 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.41□□□□□ -2.48
LSM6P62312 MIR892B-201ENST00000401279 77 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms