Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.79□□□□□ -2.12
LMO4P61968 RNU6-107P-201ENST00000516643 102 ntBASIC1.79□□□□□ -2.12
LMO4P61968 RNU6-1212P-201ENST00000517023 104 ntBASIC1.79□□□□□ -2.12
LMO4P61968 CYCSP26-201ENST00000534107 320 ntBASIC1.79□□□□□ -2.12
LMO4P61968 AC009127.3-201ENST00000570531 403 ntBASIC1.79□□□□□ -2.12
LMO4P61968 MIR5006-201ENST00000583027 110 ntBASIC1.79□□□□□ -2.12
LMO4P61968 AL008718.3-201ENST00000610217 321 ntBASIC1.79□□□□□ -2.12
LMO4P61968 TCL6_2.1-201ENST00000615162 119 ntBASIC1.79□□□□□ -2.12
LMO4P61968 MIR203B-201ENST00000636080 86 ntBASIC1.79□□□□□ -2.12
LMO4P61968 AC068205.3-201ENST00000636385 468 ntBASIC1.79□□□□□ -2.12
LMO4P61968 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
LMO4P61968 Y_RNA.304-201ENST00000365011 112 ntBASIC1.78□□□□□ -2.12
LMO4P61968 Y_RNA.308-201ENST00000365043 101 ntBASIC1.78□□□□□ -2.12
LMO4P61968 SNORA25B-201ENST00000365507 128 ntBASIC1.78□□□□□ -2.12
LMO4P61968 RNU6-211P-201ENST00000384047 107 ntBASIC1.78□□□□□ -2.12
LMO4P61968 RNU6-746P-201ENST00000384112 109 ntBASIC1.78□□□□□ -2.12
LMO4P61968 U3.40-201ENST00000408706 208 ntBASIC1.78□□□□□ -2.12
LMO4P61968 RNA5SP475-201ENST00000410568 110 ntBASIC1.78□□□□□ -2.12
LMO4P61968 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.78□□□□□ -2.12
LMO4P61968 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.78□□□□□ -2.12
LMO4P61968 SNORA4.4-201ENST00000515921 135 ntBASIC1.78□□□□□ -2.12
LMO4P61968 RNU6-436P-201ENST00000516171 114 ntBASIC1.78□□□□□ -2.12
LMO4P61968 RNU6-406P-201ENST00000516470 107 ntBASIC1.78□□□□□ -2.12
LMO4P61968 RNU2-44P-201ENST00000516795 194 ntBASIC1.78□□□□□ -2.12
LMO4P61968 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LMO4P61968 MIR4308-201ENST00000580634 81 ntBASIC1.78□□□□□ -2.12
LMO4P61968 AC072026.1-201ENST00000605023 201 ntBASIC1.78□□□□□ -2.12
LMO4P61968 snoU18.1-201ENST00000629629 71 ntBASIC1.78□□□□□ -2.12
LMO4P61968 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.13
LMO4P61968 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
LMO4P61968 Y_RNA.233-201ENST00000364407 101 ntBASIC1.77□□□□□ -2.13
LMO4P61968 SNORD32B-201ENST00000364460 84 ntBASIC1.77□□□□□ -2.13
LMO4P61968 RNU6-187P-201ENST00000384139 106 ntBASIC1.77□□□□□ -2.13
LMO4P61968 SNORA67.2-201ENST00000384300 149 ntBASIC1.77□□□□□ -2.13
LMO4P61968 RNU6-1274P-201ENST00000384557 107 ntBASIC1.77□□□□□ -2.13
LMO4P61968 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.77□□□□□ -2.13
LMO4P61968 EDDM3CP-201ENST00000415977 425 ntBASIC1.77□□□□□ -2.13
LMO4P61968 BTF3P11-201ENST00000426582 477 ntBASIC1.77□□□□□ -2.13
LMO4P61968 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
LMO4P61968 AL135790.2-201ENST00000437701 267 ntBASIC1.77□□□□□ -2.13
LMO4P61968 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
LMO4P61968 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.77□□□□□ -2.13
LMO4P61968 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.77□□□□□ -2.13
LMO4P61968 MIR4524B-201ENST00000581569 115 ntBASIC1.77□□□□□ -2.13
LMO4P61968 MIR3133-201ENST00000583157 78 ntBASIC1.77□□□□□ -2.13
LMO4P61968 AC006380.1-201ENST00000603598 186 ntBASIC1.77□□□□□ -2.13
LMO4P61968 AL049779.4-201ENST00000604500 156 ntBASIC1.77□□□□□ -2.13
LMO4P61968 AC008873.1-201ENST00000625051 138 ntBASIC1.77□□□□□ -2.13
LMO4P61968 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
LMO4P61968 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
LMO4P61968 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
LMO4P61968 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
LMO4P61968 RNU6-653P-201ENST00000363074 106 ntBASIC1.76□□□□□ -2.13
LMO4P61968 RNU6-324P-201ENST00000363957 106 ntBASIC1.76□□□□□ -2.13
LMO4P61968 SNORD115-30-201ENST00000364117 82 ntBASIC1.76□□□□□ -2.13
LMO4P61968 Y_RNA.262-201ENST00000364641 102 ntBASIC1.76□□□□□ -2.13
LMO4P61968 RNU6-125P-201ENST00000384505 107 ntBASIC1.76□□□□□ -2.13
LMO4P61968 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.76□□□□□ -2.13
LMO4P61968 RNA5SP181-201ENST00000410246 98 ntBASIC1.76□□□□□ -2.13
LMO4P61968 RNU2-32P-201ENST00000411193 191 ntBASIC1.76□□□□□ -2.13
LMO4P61968 AC024067.1-201ENST00000426199 223 ntBASIC1.76□□□□□ -2.13
LMO4P61968 TOMM22P2-201ENST00000430735 237 ntBASIC1.76□□□□□ -2.13
LMO4P61968 AL445646.1-201ENST00000431784 216 ntBASIC1.76□□□□□ -2.13
LMO4P61968 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.76□□□□□ -2.13
LMO4P61968 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.76□□□□□ -2.13
LMO4P61968 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
LMO4P61968 RNU7-193P-201ENST00000516723 65 ntBASIC1.76□□□□□ -2.13
LMO4P61968 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.76□□□□□ -2.13
LMO4P61968 AC026271.5-201ENST00000577873 130 ntBASIC1.76□□□□□ -2.13
LMO4P61968 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.76□□□□□ -2.13
LMO4P61968 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.76□□□□□ -2.13
LMO4P61968 AL365265.1-201ENST00000621045 234 ntBASIC1.76□□□□□ -2.13
LMO4P61968 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
LMO4P61968 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
LMO4P61968 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
LMO4P61968 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.75□□□□□ -2.13
LMO4P61968 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
LMO4P61968 AL157777.2-201ENST00000258070 137 ntBASIC1.75□□□□□ -2.13
LMO4P61968 Y_RNA.240-201ENST00000364469 95 ntBASIC1.75□□□□□ -2.13
LMO4P61968 RNU6-546P-201ENST00000383991 107 ntBASIC1.75□□□□□ -2.13
LMO4P61968 Y_RNA.435-201ENST00000384095 112 ntBASIC1.75□□□□□ -2.13
LMO4P61968 Y_RNA.506-201ENST00000384494 102 ntBASIC1.75□□□□□ -2.13
LMO4P61968 AL031003.1-201ENST00000404229 172 ntBASIC1.75□□□□□ -2.13
LMO4P61968 SNORD23.1-201ENST00000408212 104 ntBASIC1.75□□□□□ -2.13
LMO4P61968 AL591806.2-201ENST00000433122 173 ntBASIC1.75□□□□□ -2.13
LMO4P61968 AL392103.1-201ENST00000447000 198 ntBASIC1.75□□□□□ -2.13
LMO4P61968 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.75□□□□□ -2.13
LMO4P61968 snoU13.23-201ENST00000458863 104 ntBASIC1.75□□□□□ -2.13
LMO4P61968 Y_RNA.637-201ENST00000459424 114 ntBASIC1.75□□□□□ -2.13
LMO4P61968 RNU6-237P-201ENST00000515985 71 ntBASIC1.75□□□□□ -2.13
LMO4P61968 Y_RNA.662-201ENST00000516028 97 ntBASIC1.75□□□□□ -2.13
LMO4P61968 RNU6-1219P-201ENST00000516143 112 ntBASIC1.75□□□□□ -2.13
LMO4P61968 SNORA31.15-201ENST00000516771 132 ntBASIC1.75□□□□□ -2.13
LMO4P61968 Y_RNA.703-201ENST00000516846 111 ntBASIC1.75□□□□□ -2.13
LMO4P61968 RNU6-667P-201ENST00000517186 102 ntBASIC1.75□□□□□ -2.13
LMO4P61968 AP005660.1-201ENST00000522972 293 ntBASIC1.75□□□□□ -2.13
LMO4P61968 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.75□□□□□ -2.13
LMO4P61968 MIR5692C2-201ENST00000577959 77 ntBASIC1.75□□□□□ -2.13
LMO4P61968 AL031274.2-201ENST00000599419 203 ntBASIC1.75□□□□□ -2.13
LMO4P61968 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms