Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RNU6-117P-201ENST00000365415 107 ntBASIC0.25□□□□□ -2.37
ACTBP60709 SNORD37.1-201ENST00000390968 65 ntBASIC0.25□□□□□ -2.37
ACTBP60709 RNA5SP511-201ENST00000410487 115 ntBASIC0.25□□□□□ -2.37
ACTBP60709 ZNF885P-201ENST00000420174 1098 ntBASIC0.25□□□□□ -2.37
ACTBP60709 MTCO2P12-201ENST00000427426 682 ntBASIC0.25□□□□□ -2.37
ACTBP60709 RNU6-261P-201ENST00000459506 102 ntBASIC0.25□□□□□ -2.37
ACTBP60709 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
ACTBP60709 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.25□□□□□ -2.37
ACTBP60709 SNORA68.3-201ENST00000515906 83 ntBASIC0.25□□□□□ -2.37
ACTBP60709 RNA5SP20-201ENST00000515976 84 ntBASIC0.25□□□□□ -2.37
ACTBP60709 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.25□□□□□ -2.37
ACTBP60709 AC120024.3-201ENST00000603167 156 ntBASIC0.25□□□□□ -2.37
ACTBP60709 AL136317.1-201ENST00000612653 226 ntBASIC0.25□□□□□ -2.37
ACTBP60709 AC073544.1-201ENST00000600110 1595 ntBASIC0.24□□□□□ -2.37
ACTBP60709 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.24□□□□□ -2.37
ACTBP60709 MIR452-201ENST00000385020 85 ntBASIC0.24□□□□□ -2.37
ACTBP60709 MIR1827-201ENST00000408549 66 ntBASIC0.24□□□□□ -2.37
ACTBP60709 RN7SKP142-201ENST00000411236 328 ntBASIC0.24□□□□□ -2.37
ACTBP60709 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.24□□□□□ -2.37
ACTBP60709 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.24□□□□□ -2.37
ACTBP60709 AL137792.2-201ENST00000443484 235 ntBASIC0.24□□□□□ -2.37
ACTBP60709 MTND3P7-201ENST00000474435 343 ntBASIC0.24□□□□□ -2.37
ACTBP60709 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.24□□□□□ -2.37
ACTBP60709 AC018710.1-201ENST00000506509 158 ntBASIC0.24□□□□□ -2.37
ACTBP60709 RNU7-41P-201ENST00000515917 61 ntBASIC0.24□□□□□ -2.37
ACTBP60709 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.24□□□□□ -2.37
ACTBP60709 MTND1P24-201ENST00000552175 861 ntBASIC0.24□□□□□ -2.37
ACTBP60709 AC011195.1-201ENST00000578177 177 ntBASIC0.24□□□□□ -2.37
ACTBP60709 MIR5696-201ENST00000578474 85 ntBASIC0.24□□□□□ -2.37
ACTBP60709 RNU6-94P-201ENST00000607728 107 ntBASIC0.24□□□□□ -2.37
ACTBP60709 AC007684.1-201ENST00000609671 477 ntBASIC0.24□□□□□ -2.37
ACTBP60709 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.24□□□□□ -2.37
ACTBP60709 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.24□□□□□ -2.37
ACTBP60709 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
ACTBP60709 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.23□□□□□ -2.37
ACTBP60709 MIRLET7D-201ENST00000362263 87 ntBASIC0.23□□□□□ -2.37
ACTBP60709 Y_RNA.151-201ENST00000363566 112 ntBASIC0.23□□□□□ -2.37
ACTBP60709 SNORA75-201ENST00000384158 137 ntBASIC0.23□□□□□ -2.37
ACTBP60709 RNU6-1297P-201ENST00000384415 104 ntBASIC0.23□□□□□ -2.37
ACTBP60709 RNU6-541P-201ENST00000384709 110 ntBASIC0.23□□□□□ -2.37
ACTBP60709 RNU6-376P-201ENST00000384731 106 ntBASIC0.23□□□□□ -2.37
ACTBP60709 MIR520G-201ENST00000385064 90 ntBASIC0.23□□□□□ -2.37
ACTBP60709 SNORD111-201ENST00000408139 94 ntBASIC0.23□□□□□ -2.37
ACTBP60709 RNU6-648P-201ENST00000410190 107 ntBASIC0.23□□□□□ -2.37
ACTBP60709 RNU6-177P-201ENST00000411257 104 ntBASIC0.23□□□□□ -2.37
ACTBP60709 AC005534.2-201ENST00000431047 433 ntBASIC0.23□□□□□ -2.37
ACTBP60709 MTND3P16-201ENST00000452205 344 ntBASIC0.23□□□□□ -2.37
ACTBP60709 AC092989.1-201ENST00000481235 277 ntBASIC0.23□□□□□ -2.37
ACTBP60709 RNU6-415P-201ENST00000516252 97 ntBASIC0.23□□□□□ -2.37
ACTBP60709 RNU11-2P-201ENST00000516898 142 ntBASIC0.23□□□□□ -2.37
ACTBP60709 SNORA74.3-201ENST00000517108 154 ntBASIC0.23□□□□□ -2.37
ACTBP60709 AC134698.4-201ENST00000523451 826 ntBASIC0.23□□□□□ -2.37
ACTBP60709 AF235103.2-201ENST00000525753 346 ntBASIC0.23□□□□□ -2.37
ACTBP60709 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.23□□□□□ -2.37
ACTBP60709 AC087752.4-201ENST00000605911 462 ntBASIC0.23□□□□□ -2.37
ACTBP60709 AC010999.1-201ENST00000611856 324 ntBASIC0.23□□□□□ -2.37
ACTBP60709 AC091931.1-201ENST00000623488 728 ntBASIC0.23□□□□□ -2.37
ACTBP60709 SNORA25.3-201ENST00000363205 127 ntBASIC0.22□□□□□ -2.37
ACTBP60709 RNU6-254P-201ENST00000363377 107 ntBASIC0.22□□□□□ -2.37
ACTBP60709 RNA5SP48-201ENST00000363969 126 ntBASIC0.22□□□□□ -2.37
ACTBP60709 RNY1P8-201ENST00000383970 114 ntBASIC0.22□□□□□ -2.37
ACTBP60709 RNU6-790P-201ENST00000384479 105 ntBASIC0.22□□□□□ -2.37
ACTBP60709 SNORD105-201ENST00000386910 85 ntBASIC0.22□□□□□ -2.37
ACTBP60709 RPL30P16-201ENST00000419341 429 ntBASIC0.22□□□□□ -2.37
ACTBP60709 PCMTD1P1-201ENST00000455560 355 ntBASIC0.22□□□□□ -2.37
ACTBP60709 AC046134.1-201ENST00000514454 666 ntBASIC0.22□□□□□ -2.37
ACTBP60709 RNU6-1278P-201ENST00000516130 107 ntBASIC0.22□□□□□ -2.37
ACTBP60709 Y_RNA.683-201ENST00000516508 93 ntBASIC0.22□□□□□ -2.37
ACTBP60709 SNORA62.5-201ENST00000516634 120 ntBASIC0.22□□□□□ -2.37
ACTBP60709 RNU6-835P-201ENST00000516974 104 ntBASIC0.22□□□□□ -2.37
ACTBP60709 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.22□□□□□ -2.37
ACTBP60709 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
ACTBP60709 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
ACTBP60709 AC005828.6-201ENST00000606610 232 ntBASIC0.22□□□□□ -2.37
ACTBP60709 AC008133.2-201ENST00000624540 351 ntBASIC0.22□□□□□ -2.37
ACTBP60709 MIR924-201ENST00000638017 53 ntBASIC0.22□□□□□ -2.37
ACTBP60709 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
ACTBP60709 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
ACTBP60709 U8.5-201ENST00000364528 136 ntBASIC0.21□□□□□ -2.38
ACTBP60709 RNU6-716P-201ENST00000365621 103 ntBASIC0.21□□□□□ -2.38
ACTBP60709 RNU6-1264P-201ENST00000383891 107 ntBASIC0.21□□□□□ -2.38
ACTBP60709 SNORA69-201ENST00000383895 132 ntBASIC0.21□□□□□ -2.38
ACTBP60709 RNU6-95P-201ENST00000384697 107 ntBASIC0.21□□□□□ -2.38
ACTBP60709 MIR140-201ENST00000385282 100 ntBASIC0.21□□□□□ -2.38
ACTBP60709 MTCYBP4-201ENST00000401524 249 ntBASIC0.21□□□□□ -2.38
ACTBP60709 AC243428.1-201ENST00000421099 264 ntBASIC0.21□□□□□ -2.38
ACTBP60709 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.21□□□□□ -2.38
ACTBP60709 AL392103.1-201ENST00000447000 198 ntBASIC0.21□□□□□ -2.38
ACTBP60709 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.21□□□□□ -2.38
ACTBP60709 MTND1P11-201ENST00000456661 876 ntBASIC0.21□□□□□ -2.38
ACTBP60709 AC067940.1-201ENST00000458411 300 ntBASIC0.21□□□□□ -2.38
ACTBP60709 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
ACTBP60709 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.21□□□□□ -2.38
ACTBP60709 RNU6-1096P-201ENST00000517089 102 ntBASIC0.21□□□□□ -2.38
ACTBP60709 AC023442.1-201ENST00000531247 422 ntBASIC0.21□□□□□ -2.38
ACTBP60709 MIR4762-201ENST00000585261 75 ntBASIC0.21□□□□□ -2.38
ACTBP60709 AC073648.5-201ENST00000603502 305 ntBASIC0.21□□□□□ -2.38
ACTBP60709 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.21□□□□□ -2.38
ACTBP60709 AC100810.6-201ENST00000638068 285 ntBASIC0.21□□□□□ -2.38
ACTBP60709 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms