Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AL157777.2-201ENST00000258070 137 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 AL596028.1-201ENST00000326971 197 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 Y_RNA.7-201ENST00000362352 102 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 SNORD114-7-201ENST00000362520 77 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 SNORA80A-201ENST00000363922 136 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 snoU2_19.4-201ENST00000364329 80 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 Y_RNA.412-201ENST00000384001 104 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 RNU6-418P-201ENST00000384035 107 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 Y_RNA.441-201ENST00000384123 112 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 Y_RNA.510-201ENST00000384511 114 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 Y_RNA.572-201ENST00000384757 98 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 MIR524-201ENST00000385242 87 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 RNU6-381P-201ENST00000391259 108 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 MIR873-201ENST00000401120 77 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 RNU2-48P-201ENST00000410694 191 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 RNU2-32P-201ENST00000411193 191 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 AL513328.1-201ENST00000446460 224 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 HMGN2P18-201ENST00000450680 270 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 SNORD65B-201ENST00000459126 73 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 RNU7-141P-201ENST00000459304 62 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 AC114982.1-201ENST00000469402 321 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 AC023141.11-201ENST00000508864 202 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.98□□□□□ -2.09
ERVFC1-1P60608 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.98□□□□□ -2.09
ERVFC1-1P60608 MIR3684-201ENST00000579779 74 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 MIR3616-201ENST00000584070 92 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 ELOCP29-201ENST00000588193 334 ntBASIC1.98□□□□□ -2.09
ERVFC1-1P60608 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.98□□□□□ -2.09
ERVFC1-1P60608 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.98□□□□□ -2.09
ERVFC1-1P60608 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ERVFC1-1P60608 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
ERVFC1-1P60608 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
ERVFC1-1P60608 Y_RNA.8-201ENST00000362353 102 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 SNORA27.1-201ENST00000362604 124 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 RNU6-899P-201ENST00000363947 107 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 Y_RNA.398-201ENST00000383952 99 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 RNU6-546P-201ENST00000383991 107 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 RNU4-52P-201ENST00000384209 138 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 SNORD116-13-201ENST00000384408 92 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 RNU6-220P-201ENST00000390919 107 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 AL355497.1-201ENST00000406262 551 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 AC016909.1-201ENST00000415916 166 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 AL161788.1-201ENST00000441805 169 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 RPS20P10-201ENST00000451209 253 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 SNORA70.12-201ENST00000516084 153 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 RNU7-200P-201ENST00000516105 62 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 RNU6-346P-201ENST00000516288 111 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 RNU6-1337P-201ENST00000516525 95 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 AC025647.1-201ENST00000517879 253 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 AC021269.2-201ENST00000532318 330 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 AC022616.8-201ENST00000533569 253 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.97□□□□□ -2.09
ERVFC1-1P60608 SNORD53-201ENST00000579969 78 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 MIR3910-1-201ENST00000580936 111 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 MIR5739-201ENST00000619803 80 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 U2.22-201ENST00000636441 106 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.97□□□□□ -2.09
ERVFC1-1P60608 ZNF720P1-201ENST00000562403 1939 ntBASIC1.97□□□□□ -2.09
ERVFC1-1P60608 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
ERVFC1-1P60608 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ERVFC1-1P60608 Y_RNA.121-201ENST00000363309 113 ntBASIC1.96□□□□□ -2.1
ERVFC1-1P60608 U8.7-201ENST00000364940 136 ntBASIC1.96□□□□□ -2.1
ERVFC1-1P60608 RNY1P5-201ENST00000383890 115 ntBASIC1.96□□□□□ -2.1
ERVFC1-1P60608 SNORA6-201ENST00000384033 151 ntBASIC1.96□□□□□ -2.1
ERVFC1-1P60608 MIR626-201ENST00000385032 94 ntBASIC1.96□□□□□ -2.1
ERVFC1-1P60608 HMGN2P38-201ENST00000423806 265 ntBASIC1.96□□□□□ -2.1
ERVFC1-1P60608 AC105272.1-201ENST00000438604 198 ntBASIC1.96□□□□□ -2.1
ERVFC1-1P60608 HSPE1P13-201ENST00000451143 297 ntBASIC1.96□□□□□ -2.1
ERVFC1-1P60608 AC010531.2-201ENST00000465012 153 ntBASIC1.96□□□□□ -2.1
ERVFC1-1P60608 RPS26P55-201ENST00000471178 356 ntBASIC1.96□□□□□ -2.1
ERVFC1-1P60608 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.96□□□□□ -2.1
ERVFC1-1P60608 AC090255.1-201ENST00000495779 349 ntBASIC1.96□□□□□ -2.1
ERVFC1-1P60608 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.96□□□□□ -2.1
ERVFC1-1P60608 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.96□□□□□ -2.1
ERVFC1-1P60608 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.96□□□□□ -2.1
ERVFC1-1P60608 AC010598.1-201ENST00000510378 103 ntBASIC1.96□□□□□ -2.1
ERVFC1-1P60608 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.96□□□□□ -2.1
ERVFC1-1P60608 AC006023.1-201ENST00000603944 259 ntBASIC1.96□□□□□ -2.1
ERVFC1-1P60608 AC108706.1-201ENST00000611053 297 ntBASIC1.96□□□□□ -2.1
ERVFC1-1P60608 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.96□□□□□ -2.1
ERVFC1-1P60608 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ERVFC1-1P60608 MIR340-201ENST00000362125 95 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 MIRLET7G-201ENST00000362280 84 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 Y_RNA.75-201ENST00000362927 97 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 Y_RNA.182-201ENST00000363880 111 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 RNU6-743P-201ENST00000364151 106 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 Y_RNA.293-201ENST00000364908 93 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 RNU6-1235P-201ENST00000384559 107 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 SNORA40.19-201ENST00000390846 128 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 AC087499.2-201ENST00000432861 149 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 AC074290.1-201ENST00000448883 135 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 RNU6-498P-201ENST00000459468 107 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.95□□□□□ -2.1
ERVFC1-1P60608 SCARNA8-201ENST00000515924 131 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 RNU6-948P-201ENST00000516374 107 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 SNORA48.11-201ENST00000517015 89 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 RNU6-789P-201ENST00000517105 102 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 RNA5SP490-201ENST00000517141 136 ntBASIC1.95□□□□□ -2.1
ERVFC1-1P60608 AC027419.1-201ENST00000522976 328 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms