Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MIR3935-201ENST00000583472 104 ntBASIC2.02□□□□□ -2.09
RHBDL3P58872 AL929325.1-201ENST00000603096 117 ntBASIC2.02□□□□□ -2.09
RHBDL3P58872 MIR6079-201ENST00000635807 62 ntBASIC2.02□□□□□ -2.09
RHBDL3P58872 AC112487.2-201ENST00000637950 304 ntBASIC2.02□□□□□ -2.09
RHBDL3P58872 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.02□□□□□ -2.09
RHBDL3P58872 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RHBDL3P58872 Y_RNA.4-201ENST00000362333 112 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 Y_RNA.238-201ENST00000364441 102 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 Y_RNA.252-201ENST00000364556 101 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 SNORD48-201ENST00000364953 64 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 Y_RNA.431-201ENST00000384086 102 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 RNU6-1065P-201ENST00000384513 106 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 RNU6-440P-201ENST00000390882 105 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 SUMO2P12-201ENST00000405924 140 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 BTF3P4-201ENST00000418852 495 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 PGBD4P5-201ENST00000445958 426 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 AC079140.2-201ENST00000506193 142 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 RNU6-1012P-201ENST00000516606 109 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 AC023442.1-201ENST00000531247 422 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 AC006600.1-201ENST00000572529 153 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.01□□□□□ -2.09
RHBDL3P58872 LARP7P1-201ENST00000605576 316 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 MIR502-201ENST00000606349 86 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 AC138305.3-201ENST00000624988 240 ntBASIC2.01□□□□□ -2.09
RHBDL3P58872 MIR378A-201ENST00000362177 66 ntBASIC2□□□□□ -2.09
RHBDL3P58872 RNU4-73P-201ENST00000363164 141 ntBASIC2□□□□□ -2.09
RHBDL3P58872 RNU6-454P-201ENST00000364292 107 ntBASIC2□□□□□ -2.09
RHBDL3P58872 Y_RNA.230-201ENST00000364348 109 ntBASIC2□□□□□ -2.09
RHBDL3P58872 Y_RNA.526-201ENST00000384572 110 ntBASIC2□□□□□ -2.09
RHBDL3P58872 MIR194-1-201ENST00000384892 85 ntBASIC2□□□□□ -2.09
RHBDL3P58872 SDAD1P3-201ENST00000427380 333 ntBASIC2□□□□□ -2.09
RHBDL3P58872 AL137792.2-201ENST00000443484 235 ntBASIC2□□□□□ -2.09
RHBDL3P58872 RPS26P55-201ENST00000471178 356 ntBASIC2□□□□□ -2.09
RHBDL3P58872 RNU6-970P-201ENST00000516312 107 ntBASIC2□□□□□ -2.09
RHBDL3P58872 Y_RNA.675-201ENST00000516389 149 ntBASIC2□□□□□ -2.09
RHBDL3P58872 RNU7-28P-201ENST00000516759 62 ntBASIC2□□□□□ -2.09
RHBDL3P58872 AC093027.1-201ENST00000546698 429 ntBASIC2□□□□□ -2.09
RHBDL3P58872 AC005176.2-201ENST00000596933 147 ntBASIC2□□□□□ -2.09
RHBDL3P58872 snoU13.31-201ENST00000607291 104 ntBASIC2□□□□□ -2.09
RHBDL3P58872 AC004467.1-201ENST00000615678 330 ntBASIC2□□□□□ -2.09
RHBDL3P58872 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RHBDL3P58872 RNU6-1115P-201ENST00000362490 106 ntBASIC1.99□□□□□ -2.09
RHBDL3P58872 MIR520G-201ENST00000385064 90 ntBASIC1.99□□□□□ -2.09
RHBDL3P58872 AL606517.2-201ENST00000442855 241 ntBASIC1.99□□□□□ -2.09
RHBDL3P58872 AL163540.1-201ENST00000485382 386 ntBASIC1.99□□□□□ -2.09
RHBDL3P58872 AC108729.3-201ENST00000513484 108 ntBASIC1.99□□□□□ -2.09
RHBDL3P58872 RNU6-1053P-201ENST00000515930 101 ntBASIC1.99□□□□□ -2.09
RHBDL3P58872 RNU2-12P-201ENST00000517216 168 ntBASIC1.99□□□□□ -2.09
RHBDL3P58872 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.99□□□□□ -2.09
RHBDL3P58872 AP002001.1-203ENST00000534002 267 ntBASIC1.99□□□□□ -2.09
RHBDL3P58872 AC015688.6-201ENST00000577737 104 ntBASIC1.99□□□□□ -2.09
RHBDL3P58872 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.99□□□□□ -2.09
RHBDL3P58872 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
RHBDL3P58872 AC127459.3-201ENST00000624328 466 ntBASIC1.99□□□□□ -2.09
RHBDL3P58872 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RHBDL3P58872 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RHBDL3P58872 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.98□□□□□ -2.09
RHBDL3P58872 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
RHBDL3P58872 RNY3P11-201ENST00000364153 102 ntBASIC1.98□□□□□ -2.09
RHBDL3P58872 SNORD1A-201ENST00000364968 72 ntBASIC1.98□□□□□ -2.09
RHBDL3P58872 RNU6-203P-201ENST00000384038 104 ntBASIC1.98□□□□□ -2.09
RHBDL3P58872 AP1B1P2-201ENST00000416196 106 ntBASIC1.98□□□□□ -2.09
RHBDL3P58872 AF228730.4-201ENST00000421457 183 ntBASIC1.98□□□□□ -2.09
RHBDL3P58872 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.98□□□□□ -2.09
RHBDL3P58872 RNU6-1170P-201ENST00000515974 106 ntBASIC1.98□□□□□ -2.09
RHBDL3P58872 Y_RNA.661-201ENST00000516003 99 ntBASIC1.98□□□□□ -2.09
RHBDL3P58872 RNU6-341P-201ENST00000516973 96 ntBASIC1.98□□□□□ -2.09
RHBDL3P58872 MIR4659A-201ENST00000580269 81 ntBASIC1.98□□□□□ -2.09
RHBDL3P58872 MIR4795-201ENST00000584182 89 ntBASIC1.98□□□□□ -2.09
RHBDL3P58872 AC040896.1-201ENST00000613819 479 ntBASIC1.98□□□□□ -2.09
RHBDL3P58872 MIR4272-201ENST00000635924 64 ntBASIC1.98□□□□□ -2.09
RHBDL3P58872 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
RHBDL3P58872 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RHBDL3P58872 MIR302D-201ENST00000362275 68 ntBASIC1.97□□□□□ -2.09
RHBDL3P58872 MIR513A1-201ENST00000385138 129 ntBASIC1.97□□□□□ -2.09
RHBDL3P58872 RNU2-56P-201ENST00000516826 190 ntBASIC1.97□□□□□ -2.09
RHBDL3P58872 RPS29P30-201ENST00000600975 111 ntBASIC1.97□□□□□ -2.09
RHBDL3P58872 AC021506.2-201ENST00000612354 169 ntBASIC1.97□□□□□ -2.09
RHBDL3P58872 AL513423.1-201ENST00000621695 132 ntBASIC1.97□□□□□ -2.09
RHBDL3P58872 AC091925.1-201ENST00000623204 462 ntBASIC1.97□□□□□ -2.09
RHBDL3P58872 AC095038.3-201ENST00000634439 195 ntBASIC1.97□□□□□ -2.09
RHBDL3P58872 Y_RNA.164-201ENST00000363709 102 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 RNU6-961P-201ENST00000363893 105 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 RNU2-54P-201ENST00000410299 190 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 AL390729.2-201ENST00000416137 156 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.96□□□□□ -2.1
RHBDL3P58872 HSPE1P13-201ENST00000451143 297 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.96□□□□□ -2.1
RHBDL3P58872 SNORA31.10-201ENST00000516482 106 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 Y_RNA.713-201ENST00000517013 96 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 RNU6-902P-201ENST00000517212 91 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 AP002004.2-201ENST00000531656 154 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 MIR3937-201ENST00000580135 106 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 AC092447.9-201ENST00000603395 144 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 AC073349.3-201ENST00000617616 186 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 AL121890.5-201ENST00000620848 304 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.96□□□□□ -2.1
RHBDL3P58872 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 275.7 ms