Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.79□□□□□ -2.28
VSX2P58304 CYP3A137P-201ENST00000562436 69 ntBASIC0.79□□□□□ -2.28
VSX2P58304 AC136932.1-201ENST00000574771 208 ntBASIC0.79□□□□□ -2.28
VSX2P58304 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.79□□□□□ -2.28
VSX2P58304 AL162424.1-201ENST00000602325 221 ntBASIC0.79□□□□□ -2.28
VSX2P58304 AL117336.2-201ENST00000602435 335 ntBASIC0.79□□□□□ -2.28
VSX2P58304 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
VSX2P58304 AC005014.2-201ENST00000607795 599 ntBASIC0.79□□□□□ -2.28
VSX2P58304 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
VSX2P58304 SNORA1B-201ENST00000362535 133 ntBASIC0.78□□□□□ -2.28
VSX2P58304 RNA5SP361-201ENST00000362686 118 ntBASIC0.78□□□□□ -2.28
VSX2P58304 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
VSX2P58304 Y_RNA.265-201ENST00000364677 108 ntBASIC0.78□□□□□ -2.28
VSX2P58304 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.78□□□□□ -2.28
VSX2P58304 Y_RNA.450-201ENST00000384198 113 ntBASIC0.78□□□□□ -2.28
VSX2P58304 RNU6-1145P-201ENST00000384246 107 ntBASIC0.78□□□□□ -2.28
VSX2P58304 Y_RNA.557-201ENST00000384680 107 ntBASIC0.78□□□□□ -2.28
VSX2P58304 MIR181A1-201ENST00000385026 110 ntBASIC0.78□□□□□ -2.28
VSX2P58304 RNU6-373P-201ENST00000411247 98 ntBASIC0.78□□□□□ -2.28
VSX2P58304 MTCO3P19-201ENST00000415864 321 ntBASIC0.78□□□□□ -2.28
VSX2P58304 POLR2J4-204ENST00000418424 324 ntBASIC0.78□□□□□ -2.28
VSX2P58304 USP9YP16-201ENST00000430287 407 ntBASIC0.78□□□□□ -2.28
VSX2P58304 MTND3P21-201ENST00000433774 331 ntBASIC0.78□□□□□ -2.28
VSX2P58304 AC245047.7-201ENST00000440265 293 ntBASIC0.78□□□□□ -2.28
VSX2P58304 Z98949.2-201ENST00000440996 144 ntBASIC0.78□□□□□ -2.28
VSX2P58304 USP9YP23-201ENST00000455085 407 ntBASIC0.78□□□□□ -2.28
VSX2P58304 SNORD5.1-201ENST00000458800 75 ntBASIC0.78□□□□□ -2.28
VSX2P58304 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.78□□□□□ -2.28
VSX2P58304 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.78□□□□□ -2.28
VSX2P58304 RNA5SP20-201ENST00000515976 84 ntBASIC0.78□□□□□ -2.28
VSX2P58304 SNORD79.1-201ENST00000516069 84 ntBASIC0.78□□□□□ -2.28
VSX2P58304 RNU4-49P-201ENST00000516080 140 ntBASIC0.78□□□□□ -2.28
VSX2P58304 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
VSX2P58304 AC090049.2-201ENST00000550377 109 ntBASIC0.78□□□□□ -2.28
VSX2P58304 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.78□□□□□ -2.28
VSX2P58304 MIR5701-3-201ENST00000578890 82 ntBASIC0.78□□□□□ -2.28
VSX2P58304 MIR5701-1-201ENST00000585138 82 ntBASIC0.78□□□□□ -2.28
VSX2P58304 MIR5701-2-201ENST00000615634 82 ntBASIC0.78□□□□□ -2.28
VSX2P58304 AC015540.1-201ENST00000615828 501 ntBASIC0.78□□□□□ -2.28
VSX2P58304 AC006435.5-201ENST00000624486 112 ntBASIC0.78□□□□□ -2.28
VSX2P58304 Y_RNA.3-201ENST00000362331 103 ntBASIC0.77□□□□□ -2.29
VSX2P58304 Y_RNA.112-201ENST00000363250 102 ntBASIC0.77□□□□□ -2.29
VSX2P58304 RNU6-454P-201ENST00000364292 107 ntBASIC0.77□□□□□ -2.29
VSX2P58304 RNU6-407P-201ENST00000365280 104 ntBASIC0.77□□□□□ -2.29
VSX2P58304 MIR19B1-201ENST00000384829 87 ntBASIC0.77□□□□□ -2.29
VSX2P58304 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
VSX2P58304 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
VSX2P58304 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.77□□□□□ -2.29
VSX2P58304 AC104332.1-201ENST00000440471 797 ntBASIC0.77□□□□□ -2.29
VSX2P58304 RNU7-12P-201ENST00000516030 62 ntBASIC0.77□□□□□ -2.29
VSX2P58304 Y_RNA.682-201ENST00000516457 100 ntBASIC0.77□□□□□ -2.29
VSX2P58304 RNU6-1291P-201ENST00000516591 104 ntBASIC0.77□□□□□ -2.29
VSX2P58304 Y_RNA.706-201ENST00000516933 99 ntBASIC0.77□□□□□ -2.29
VSX2P58304 MIR5000-201ENST00000577717 103 ntBASIC0.77□□□□□ -2.29
VSX2P58304 AC080013.6-201ENST00000606185 215 ntBASIC0.77□□□□□ -2.29
VSX2P58304 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
VSX2P58304 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
VSX2P58304 Y_RNA.9-201ENST00000362354 101 ntBASIC0.76□□□□□ -2.29
VSX2P58304 SNORA27.1-201ENST00000362604 124 ntBASIC0.76□□□□□ -2.29
VSX2P58304 Y_RNA.295-201ENST00000364918 102 ntBASIC0.76□□□□□ -2.29
VSX2P58304 RNU4-12P-201ENST00000365233 139 ntBASIC0.76□□□□□ -2.29
VSX2P58304 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
VSX2P58304 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
VSX2P58304 MIR190B-201ENST00000401119 79 ntBASIC0.76□□□□□ -2.29
VSX2P58304 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.76□□□□□ -2.29
VSX2P58304 AC018865.2-201ENST00000423631 129 ntBASIC0.76□□□□□ -2.29
VSX2P58304 USMG5P1-201ENST00000425964 177 ntBASIC0.76□□□□□ -2.29
VSX2P58304 AC022493.2-201ENST00000506122 481 ntBASIC0.76□□□□□ -2.29
VSX2P58304 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.76□□□□□ -2.29
VSX2P58304 AC026782.1-201ENST00000512952 449 ntBASIC0.76□□□□□ -2.29
VSX2P58304 RNU6-63P-201ENST00000516690 95 ntBASIC0.76□□□□□ -2.29
VSX2P58304 RNU1-54P-201ENST00000517181 120 ntBASIC0.76□□□□□ -2.29
VSX2P58304 SNORA28-201ENST00000606769 126 ntBASIC0.76□□□□□ -2.29
VSX2P58304 AC100812.1-201ENST00000607622 580 ntBASIC0.76□□□□□ -2.29
VSX2P58304 U6.115-201ENST00000636045 103 ntBASIC0.76□□□□□ -2.29
VSX2P58304 MIR3662-201ENST00000637030 95 ntBASIC0.76□□□□□ -2.29
VSX2P58304 AC068137.4-201ENST00000638485 296 ntBASIC0.76□□□□□ -2.29
VSX2P58304 RNU1-36P-201ENST00000365130 165 ntBASIC0.75□□□□□ -2.29
VSX2P58304 RNU6-969P-201ENST00000383900 105 ntBASIC0.75□□□□□ -2.29
VSX2P58304 MIR526A1-201ENST00000384897 85 ntBASIC0.75□□□□□ -2.29
VSX2P58304 MTND4LP16-201ENST00000440828 295 ntBASIC0.75□□□□□ -2.29
VSX2P58304 RNU7-87P-201ENST00000459343 62 ntBASIC0.75□□□□□ -2.29
VSX2P58304 MTND5P5-201ENST00000503764 376 ntBASIC0.75□□□□□ -2.29
VSX2P58304 SNORA31.4-201ENST00000516049 129 ntBASIC0.75□□□□□ -2.29
VSX2P58304 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
VSX2P58304 RNU6-341P-201ENST00000516973 96 ntBASIC0.75□□□□□ -2.29
VSX2P58304 AC090617.3-201ENST00000573670 475 ntBASIC0.75□□□□□ -2.29
VSX2P58304 MIR4790-201ENST00000577799 79 ntBASIC0.75□□□□□ -2.29
VSX2P58304 AC108706.1-201ENST00000611053 297 ntBASIC0.75□□□□□ -2.29
VSX2P58304 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
VSX2P58304 AC073544.1-201ENST00000600110 1595 ntBASIC0.74□□□□□ -2.29
VSX2P58304 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
VSX2P58304 RNY1P16-201ENST00000363063 111 ntBASIC0.74□□□□□ -2.29
VSX2P58304 RNU4-41P-201ENST00000364426 143 ntBASIC0.74□□□□□ -2.29
VSX2P58304 SNORA2.2-201ENST00000365473 135 ntBASIC0.74□□□□□ -2.29
VSX2P58304 RNU6-318P-201ENST00000384283 103 ntBASIC0.74□□□□□ -2.29
VSX2P58304 Y_RNA.490-201ENST00000384413 102 ntBASIC0.74□□□□□ -2.29
VSX2P58304 Y_RNA.516-201ENST00000384541 124 ntBASIC0.74□□□□□ -2.29
VSX2P58304 MIR598-201ENST00000384868 97 ntBASIC0.74□□□□□ -2.29
VSX2P58304 MIR613-201ENST00000385248 95 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms