Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 Y_RNA.582-201ENST00000391023 95 ntBASIC0.32□□□□□ -2.36
CLDN8P56748 RNU6-648P-201ENST00000410190 107 ntBASIC0.32□□□□□ -2.36
CLDN8P56748 AC243428.1-201ENST00000421099 264 ntBASIC0.32□□□□□ -2.36
CLDN8P56748 PIGPP3-201ENST00000425307 415 ntBASIC0.32□□□□□ -2.36
CLDN8P56748 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.32□□□□□ -2.36
CLDN8P56748 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.32□□□□□ -2.36
CLDN8P56748 UQCRBP2-201ENST00000447827 297 ntBASIC0.32□□□□□ -2.36
CLDN8P56748 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.32□□□□□ -2.36
CLDN8P56748 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.32□□□□□ -2.36
CLDN8P56748 SNORA74.3-201ENST00000517108 154 ntBASIC0.32□□□□□ -2.36
CLDN8P56748 RNU6-89P-201ENST00000606519 100 ntBASIC0.32□□□□□ -2.36
CLDN8P56748 MIR5087-201ENST00000635826 76 ntBASIC0.32□□□□□ -2.36
CLDN8P56748 MIR136-201ENST00000385207 82 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 MIR873-201ENST00000401120 77 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 AC092447.3-201ENST00000426027 686 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.31□□□□□ -2.36
CLDN8P56748 USP9YP16-201ENST00000430287 407 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.31□□□□□ -2.36
CLDN8P56748 USP9YP23-201ENST00000455085 407 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.31□□□□□ -2.36
CLDN8P56748 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 RNU7-43P-201ENST00000516554 64 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 AF235103.2-201ENST00000525753 346 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.31□□□□□ -2.36
CLDN8P56748 AC093027.1-201ENST00000546698 429 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 AL158211.1-201ENST00000566763 763 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 AC145350.1-201ENST00000567426 208 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 MIR5696-201ENST00000578474 85 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.31□□□□□ -2.36
CLDN8P56748 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.3□□□□□ -2.36
CLDN8P56748 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 RNU6-1085P-201ENST00000363576 107 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 Y_RNA.490-201ENST00000384413 102 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 RNU1-139P-201ENST00000391307 165 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 MIR1298-201ENST00000408783 112 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.3□□□□□ -2.36
CLDN8P56748 MTATP6P13-201ENST00000438531 667 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 AC114811.1-201ENST00000507207 168 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.3□□□□□ -2.36
CLDN8P56748 Y_RNA.706-201ENST00000516933 99 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 RNU6-835P-201ENST00000516974 104 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.3□□□□□ -2.36
CLDN8P56748 AC036111.3-201ENST00000526389 112 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 AC023442.1-201ENST00000531247 422 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 AC093023.1-201ENST00000547375 507 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 ZNF519P2-201ENST00000557032 169 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 AC090617.3-201ENST00000573670 475 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.3□□□□□ -2.36
CLDN8P56748 MIR4300-201ENST00000581016 96 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 MIR151B-201ENST00000584249 96 ntBASIC0.3□□□□□ -2.36
CLDN8P56748 SNORD113.3-201ENST00000364630 78 ntBASIC0.29□□□□□ -2.36
CLDN8P56748 MIR140-201ENST00000385282 100 ntBASIC0.29□□□□□ -2.36
CLDN8P56748 MIR1827-201ENST00000408549 66 ntBASIC0.29□□□□□ -2.36
CLDN8P56748 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.29□□□□□ -2.36
CLDN8P56748 MTND1P11-201ENST00000456661 876 ntBASIC0.29□□□□□ -2.36
CLDN8P56748 Y_RNA.638-201ENST00000459374 113 ntBASIC0.29□□□□□ -2.36
CLDN8P56748 RNU7-41P-201ENST00000515917 61 ntBASIC0.29□□□□□ -2.36
CLDN8P56748 RN7SKP164-201ENST00000516138 266 ntBASIC0.29□□□□□ -2.36
CLDN8P56748 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
CLDN8P56748 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.29□□□□□ -2.36
CLDN8P56748 MIR4273-201ENST00000582824 84 ntBASIC0.29□□□□□ -2.36
CLDN8P56748 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.29□□□□□ -2.36
CLDN8P56748 AC134026.1-201ENST00000623249 2239 ntBASIC0.28□□□□□ -2.36
CLDN8P56748 MIR1-1-201ENST00000362147 71 ntBASIC0.28□□□□□ -2.36
CLDN8P56748 RNU6-281P-201ENST00000384212 103 ntBASIC0.28□□□□□ -2.36
CLDN8P56748 RNU6-342P-201ENST00000384521 104 ntBASIC0.28□□□□□ -2.36
CLDN8P56748 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.28□□□□□ -2.36
CLDN8P56748 MTCO2P12-201ENST00000427426 682 ntBASIC0.28□□□□□ -2.36
CLDN8P56748 MIR4764-201ENST00000580680 88 ntBASIC0.28□□□□□ -2.36
CLDN8P56748 AC100812.1-201ENST00000607622 580 ntBASIC0.28□□□□□ -2.36
CLDN8P56748 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.28□□□□□ -2.36
CLDN8P56748 AC068137.3-201ENST00000639191 341 ntBASIC0.28□□□□□ -2.36
CLDN8P56748 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CLDN8P56748 ZNF299P-201ENST00000406845 1804 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 RNU6-117P-201ENST00000365415 107 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 Y_RNA.373-201ENST00000365600 103 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 Y_RNA.405-201ENST00000383979 100 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 Y_RNA.409-201ENST00000383990 98 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 Y_RNA.451-201ENST00000384200 100 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 Y_RNA.524-201ENST00000384564 100 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 Y_RNA.561-201ENST00000384694 100 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 Y_RNA.621-201ENST00000411065 96 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 MRPS18CP6-201ENST00000423587 223 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 MTND3P23-201ENST00000431980 347 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 AL138726.1-201ENST00000614873 333 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 MIR6513-201ENST00000621188 64 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 AC243829.3-201ENST00000622177 108 ntBASIC0.27□□□□□ -2.37
CLDN8P56748 Y_RNA.4-201ENST00000362333 112 ntBASIC0.26□□□□□ -2.37
CLDN8P56748 U8.5-201ENST00000364528 136 ntBASIC0.26□□□□□ -2.37
CLDN8P56748 SNORA25.9-201ENST00000365087 128 ntBASIC0.26□□□□□ -2.37
CLDN8P56748 MIR516B2-201ENST00000385190 85 ntBASIC0.26□□□□□ -2.37
CLDN8P56748 AL590632.1-201ENST00000424289 371 ntBASIC0.26□□□□□ -2.37
CLDN8P56748 AC005534.2-201ENST00000431047 433 ntBASIC0.26□□□□□ -2.37
CLDN8P56748 SEPT14P3-201ENST00000439401 183 ntBASIC0.26□□□□□ -2.37
CLDN8P56748 AL732372.2-207ENST00000445840 183 ntBASIC0.26□□□□□ -2.37
CLDN8P56748 SEPT14P2-201ENST00000453405 183 ntBASIC0.26□□□□□ -2.37
CLDN8P56748 SEPT14P4-201ENST00000513445 186 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms