Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNU6-107P-201ENST00000516643 102 ntBASIC1.46□□□□□ -2.18
PEX3P56589 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.46□□□□□ -2.18
PEX3P56589 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.46□□□□□ -2.18
PEX3P56589 AC006600.1-201ENST00000572529 153 ntBASIC1.46□□□□□ -2.18
PEX3P56589 MIR3684-201ENST00000579779 74 ntBASIC1.46□□□□□ -2.18
PEX3P56589 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.46□□□□□ -2.18
PEX3P56589 MIR5188-201ENST00000583467 113 ntBASIC1.46□□□□□ -2.18
PEX3P56589 AC092447.9-201ENST00000603395 144 ntBASIC1.46□□□□□ -2.18
PEX3P56589 AC022217.4-201ENST00000604389 163 ntBASIC1.46□□□□□ -2.18
PEX3P56589 snoU13.31-201ENST00000607291 104 ntBASIC1.46□□□□□ -2.18
PEX3P56589 AL606534.2-204ENST00000635008 178 ntBASIC1.46□□□□□ -2.18
PEX3P56589 U6.115-201ENST00000636045 103 ntBASIC1.46□□□□□ -2.18
PEX3P56589 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
PEX3P56589 MIR1253-201ENST00000408273 105 ntBASIC1.45□□□□□ -2.18
PEX3P56589 Y_RNA.605-201ENST00000410577 105 ntBASIC1.45□□□□□ -2.18
PEX3P56589 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.45□□□□□ -2.18
PEX3P56589 HSPE1P9-201ENST00000440046 311 ntBASIC1.45□□□□□ -2.18
PEX3P56589 AC112492.4-201ENST00000456549 352 ntBASIC1.45□□□□□ -2.18
PEX3P56589 RNU1-98P-201ENST00000458992 160 ntBASIC1.45□□□□□ -2.18
PEX3P56589 AC004223.1-201ENST00000479840 271 ntBASIC1.45□□□□□ -2.18
PEX3P56589 AL163195.1-201ENST00000496941 348 ntBASIC1.45□□□□□ -2.18
PEX3P56589 SNORA40.14-201ENST00000516543 86 ntBASIC1.45□□□□□ -2.18
PEX3P56589 AL137100.2-201ENST00000555786 315 ntBASIC1.45□□□□□ -2.18
PEX3P56589 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.45□□□□□ -2.18
PEX3P56589 AL359075.3-201ENST00000613288 217 ntBASIC1.45□□□□□ -2.18
PEX3P56589 AC010205.1-201ENST00000616668 449 ntBASIC1.45□□□□□ -2.18
PEX3P56589 AL160413.1-201ENST00000622780 310 ntBASIC1.45□□□□□ -2.18
PEX3P56589 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.45□□□□□ -2.18
PEX3P56589 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
PEX3P56589 SNORD114-7-201ENST00000362520 77 ntBASIC1.44□□□□□ -2.18
PEX3P56589 SNORA27.1-201ENST00000362604 124 ntBASIC1.44□□□□□ -2.18
PEX3P56589 RNU6-1266P-201ENST00000362794 105 ntBASIC1.44□□□□□ -2.18
PEX3P56589 RNU1-22P-201ENST00000363334 158 ntBASIC1.44□□□□□ -2.18
PEX3P56589 SNORD115-30-201ENST00000364117 82 ntBASIC1.44□□□□□ -2.18
PEX3P56589 SNORA4.2-201ENST00000365313 147 ntBASIC1.44□□□□□ -2.18
PEX3P56589 Y_RNA.431-201ENST00000384086 102 ntBASIC1.44□□□□□ -2.18
PEX3P56589 Y_RNA.498-201ENST00000384460 102 ntBASIC1.44□□□□□ -2.18
PEX3P56589 SNORA12.1-201ENST00000390873 148 ntBASIC1.44□□□□□ -2.18
PEX3P56589 RNU6-360P-201ENST00000390944 104 ntBASIC1.44□□□□□ -2.18
PEX3P56589 EBAG9P1-201ENST00000418955 543 ntBASIC1.44□□□□□ -2.18
PEX3P56589 SDAD1P3-201ENST00000427380 333 ntBASIC1.44□□□□□ -2.18
PEX3P56589 AC005002.2-201ENST00000438228 269 ntBASIC1.44□□□□□ -2.18
PEX3P56589 AC097462.1-201ENST00000514125 324 ntBASIC1.44□□□□□ -2.18
PEX3P56589 RNU6-408P-201ENST00000515910 100 ntBASIC1.44□□□□□ -2.18
PEX3P56589 RNU6-475P-201ENST00000516073 104 ntBASIC1.44□□□□□ -2.18
PEX3P56589 RNU7-99P-201ENST00000516271 62 ntBASIC1.44□□□□□ -2.18
PEX3P56589 RNU6-966P-201ENST00000516479 104 ntBASIC1.44□□□□□ -2.18
PEX3P56589 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
PEX3P56589 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.44□□□□□ -2.18
PEX3P56589 SNORA77B-201ENST00000578179 125 ntBASIC1.44□□□□□ -2.18
PEX3P56589 MIR4423-201ENST00000580922 80 ntBASIC1.44□□□□□ -2.18
PEX3P56589 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
PEX3P56589 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
PEX3P56589 RNU6-117P-201ENST00000365415 107 ntBASIC1.43□□□□□ -2.18
PEX3P56589 MIR194-1-201ENST00000384892 85 ntBASIC1.43□□□□□ -2.18
PEX3P56589 MIR628-201ENST00000385229 95 ntBASIC1.43□□□□□ -2.18
PEX3P56589 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
PEX3P56589 RNU6-1199P-201ENST00000411249 104 ntBASIC1.43□□□□□ -2.18
PEX3P56589 AC004965.1-201ENST00000413033 213 ntBASIC1.43□□□□□ -2.18
PEX3P56589 PMCHL1-202ENST00000423102 261 ntBASIC1.43□□□□□ -2.18
PEX3P56589 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.43□□□□□ -2.18
PEX3P56589 AC099513.1-201ENST00000490423 301 ntBASIC1.43□□□□□ -2.18
PEX3P56589 Y_RNA.661-201ENST00000516003 99 ntBASIC1.43□□□□□ -2.18
PEX3P56589 RNA5SP481-201ENST00000516814 122 ntBASIC1.43□□□□□ -2.18
PEX3P56589 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.43□□□□□ -2.18
PEX3P56589 MIR4659A-201ENST00000580269 81 ntBASIC1.43□□□□□ -2.18
PEX3P56589 MIR4438-201ENST00000585271 93 ntBASIC1.43□□□□□ -2.18
PEX3P56589 AL390123.1-201ENST00000603216 237 ntBASIC1.43□□□□□ -2.18
PEX3P56589 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.43□□□□□ -2.18
PEX3P56589 AL157834.3-201ENST00000615543 103 ntBASIC1.43□□□□□ -2.18
PEX3P56589 AC240442.1-201ENST00000616055 283 ntBASIC1.43□□□□□ -2.18
PEX3P56589 AC007485.1-201ENST00000616755 206 ntBASIC1.43□□□□□ -2.18
PEX3P56589 AL353770.2-201ENST00000620024 78 ntBASIC1.43□□□□□ -2.18
PEX3P56589 AL161722.3-201ENST00000605789 2983 ntBASIC1.43□□□□□ -2.18
PEX3P56589 MIR369-201ENST00000362155 70 ntBASIC1.42□□□□□ -2.18
PEX3P56589 MIR302D-201ENST00000362275 68 ntBASIC1.42□□□□□ -2.18
PEX3P56589 Y_RNA.31-201ENST00000362574 102 ntBASIC1.42□□□□□ -2.18
PEX3P56589 Y_RNA.101-201ENST00000363154 102 ntBASIC1.42□□□□□ -2.18
PEX3P56589 Y_RNA.124-201ENST00000363339 93 ntBASIC1.42□□□□□ -2.18
PEX3P56589 RNU6-338P-201ENST00000383888 105 ntBASIC1.42□□□□□ -2.18
PEX3P56589 RNU6-926P-201ENST00000384075 107 ntBASIC1.42□□□□□ -2.18
PEX3P56589 MIR150-201ENST00000385048 84 ntBASIC1.42□□□□□ -2.18
PEX3P56589 RNA5SP109-201ENST00000391010 116 ntBASIC1.42□□□□□ -2.18
PEX3P56589 SNORA40.6-201ENST00000391153 128 ntBASIC1.42□□□□□ -2.18
PEX3P56589 MCFD2P1-201ENST00000417812 300 ntBASIC1.42□□□□□ -2.18
PEX3P56589 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.42□□□□□ -2.18
PEX3P56589 AC073910.1-201ENST00000445047 438 ntBASIC1.42□□□□□ -2.18
PEX3P56589 SUMO1P2-201ENST00000452524 304 ntBASIC1.42□□□□□ -2.18
PEX3P56589 RPS29P29-201ENST00000456396 171 ntBASIC1.42□□□□□ -2.18
PEX3P56589 AC025465.3-201ENST00000510570 311 ntBASIC1.42□□□□□ -2.18
PEX3P56589 SNORA31.10-201ENST00000516482 106 ntBASIC1.42□□□□□ -2.18
PEX3P56589 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.42□□□□□ -2.18
PEX3P56589 AC023442.1-201ENST00000531247 422 ntBASIC1.42□□□□□ -2.18
PEX3P56589 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.42□□□□□ -2.18
PEX3P56589 AC023157.2-201ENST00000540596 141 ntBASIC1.42□□□□□ -2.18
PEX3P56589 MIR4498-201ENST00000577599 66 ntBASIC1.42□□□□□ -2.18
PEX3P56589 MIR3198-2-201ENST00000577868 80 ntBASIC1.42□□□□□ -2.18
PEX3P56589 MIR3660-201ENST00000584845 100 ntBASIC1.42□□□□□ -2.18
PEX3P56589 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.42□□□□□ -2.18
PEX3P56589 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms