Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.59□□□□□ -2.15
CDH13P55290 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.59□□□□□ -2.15
CDH13P55290 MIR8054-201ENST00000620877 86 ntBASIC1.59□□□□□ -2.15
CDH13P55290 AC100821.1-201ENST00000523153 2479 ntBASIC1.59□□□□□ -2.16
CDH13P55290 SNORD115-30-201ENST00000364117 82 ntBASIC1.58□□□□□ -2.16
CDH13P55290 RNU6-407P-201ENST00000365280 104 ntBASIC1.58□□□□□ -2.16
CDH13P55290 RNU6-20P-201ENST00000384106 107 ntBASIC1.58□□□□□ -2.16
CDH13P55290 RNU6-708P-201ENST00000384217 107 ntBASIC1.58□□□□□ -2.16
CDH13P55290 RNY1P14-201ENST00000384426 108 ntBASIC1.58□□□□□ -2.16
CDH13P55290 Y_RNA.604-201ENST00000410574 102 ntBASIC1.58□□□□□ -2.16
CDH13P55290 RN7SKP101-201ENST00000411376 320 ntBASIC1.58□□□□□ -2.16
CDH13P55290 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.58□□□□□ -2.16
CDH13P55290 AC005908.1-201ENST00000468701 347 ntBASIC1.58□□□□□ -2.16
CDH13P55290 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.58□□□□□ -2.16
CDH13P55290 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.58□□□□□ -2.16
CDH13P55290 AC055872.1-201ENST00000570978 278 ntBASIC1.58□□□□□ -2.16
CDH13P55290 AC073413.2-201ENST00000604332 360 ntBASIC1.58□□□□□ -2.16
CDH13P55290 AL121655.1-201ENST00000605811 308 ntBASIC1.58□□□□□ -2.16
CDH13P55290 MIR6845-201ENST00000613182 61 ntBASIC1.58□□□□□ -2.16
CDH13P55290 uc_338.22-201ENST00000622722 187 ntBASIC1.58□□□□□ -2.16
CDH13P55290 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CDH13P55290 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CDH13P55290 RNU6-1031P-201ENST00000384773 107 ntBASIC1.57□□□□□ -2.16
CDH13P55290 RNU1-78P-201ENST00000391248 165 ntBASIC1.57□□□□□ -2.16
CDH13P55290 MIR1289-2-201ENST00000408360 111 ntBASIC1.57□□□□□ -2.16
CDH13P55290 AC092473.1-201ENST00000441098 221 ntBASIC1.57□□□□□ -2.16
CDH13P55290 RNU7-34P-201ENST00000459394 64 ntBASIC1.57□□□□□ -2.16
CDH13P55290 AL163540.1-201ENST00000485382 386 ntBASIC1.57□□□□□ -2.16
CDH13P55290 SNORA31.10-201ENST00000516482 106 ntBASIC1.57□□□□□ -2.16
CDH13P55290 RNU6-295P-201ENST00000516901 104 ntBASIC1.57□□□□□ -2.16
CDH13P55290 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CDH13P55290 MIR4422-201ENST00000581938 83 ntBASIC1.57□□□□□ -2.16
CDH13P55290 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.57□□□□□ -2.16
CDH13P55290 RPS29P30-201ENST00000600975 111 ntBASIC1.57□□□□□ -2.16
CDH13P55290 AL929325.1-201ENST00000603096 117 ntBASIC1.57□□□□□ -2.16
CDH13P55290 SNORD58B-201ENST00000607313 66 ntBASIC1.57□□□□□ -2.16
CDH13P55290 AC011476.5-201ENST00000615594 130 ntBASIC1.57□□□□□ -2.16
CDH13P55290 AC090971.5-201ENST00000621102 293 ntBASIC1.57□□□□□ -2.16
CDH13P55290 AC127459.3-201ENST00000624328 466 ntBASIC1.57□□□□□ -2.16
CDH13P55290 MIR6079-201ENST00000635807 62 ntBASIC1.57□□□□□ -2.16
CDH13P55290 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CDH13P55290 MIR302D-201ENST00000362275 68 ntBASIC1.56□□□□□ -2.16
CDH13P55290 SNORD33-201ENST00000362761 85 ntBASIC1.56□□□□□ -2.16
CDH13P55290 Y_RNA.61-201ENST00000362835 102 ntBASIC1.56□□□□□ -2.16
CDH13P55290 Y_RNA.101-201ENST00000363154 102 ntBASIC1.56□□□□□ -2.16
CDH13P55290 RNU6-117P-201ENST00000365415 107 ntBASIC1.56□□□□□ -2.16
CDH13P55290 RNU6-203P-201ENST00000384038 104 ntBASIC1.56□□□□□ -2.16
CDH13P55290 Y_RNA.460-201ENST00000384255 102 ntBASIC1.56□□□□□ -2.16
CDH13P55290 Y_RNA.462-201ENST00000384268 102 ntBASIC1.56□□□□□ -2.16
CDH13P55290 RNU6-440P-201ENST00000390882 105 ntBASIC1.56□□□□□ -2.16
CDH13P55290 AC004965.1-201ENST00000413033 213 ntBASIC1.56□□□□□ -2.16
CDH13P55290 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH13P55290 AL390729.2-201ENST00000416137 156 ntBASIC1.56□□□□□ -2.16
CDH13P55290 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH13P55290 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
CDH13P55290 HSPE1P13-201ENST00000451143 297 ntBASIC1.56□□□□□ -2.16
CDH13P55290 Y_RNA.713-201ENST00000517013 96 ntBASIC1.56□□□□□ -2.16
CDH13P55290 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CDH13P55290 AC015688.6-201ENST00000577737 104 ntBASIC1.56□□□□□ -2.16
CDH13P55290 AL390123.1-201ENST00000603216 237 ntBASIC1.56□□□□□ -2.16
CDH13P55290 AC022441.3-201ENST00000605737 136 ntBASIC1.56□□□□□ -2.16
CDH13P55290 Y_RNA.772-201ENST00000606692 102 ntBASIC1.56□□□□□ -2.16
CDH13P55290 AC006157.1-201ENST00000611750 366 ntBASIC1.56□□□□□ -2.16
CDH13P55290 AL160413.1-201ENST00000622780 310 ntBASIC1.56□□□□□ -2.16
CDH13P55290 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.56□□□□□ -2.16
CDH13P55290 AC095038.3-201ENST00000634439 195 ntBASIC1.56□□□□□ -2.16
CDH13P55290 ICE2P2-201ENST00000483823 2787 ntBASIC1.56□□□□□ -2.16
CDH13P55290 ZNF72P-201ENST00000425869 1908 ntBASIC1.56□□□□□ -2.16
CDH13P55290 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CDH13P55290 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CDH13P55290 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CDH13P55290 AC006026.1-201ENST00000444025 1803 ntBASIC1.55□□□□□ -2.16
CDH13P55290 RNU6-1123P-201ENST00000362347 106 ntBASIC1.55□□□□□ -2.16
CDH13P55290 RNU6-376P-201ENST00000384731 106 ntBASIC1.55□□□□□ -2.16
CDH13P55290 MIR504-201ENST00000385065 83 ntBASIC1.55□□□□□ -2.16
CDH13P55290 AL627390.1-201ENST00000396055 340 ntBASIC1.55□□□□□ -2.16
CDH13P55290 MIR1302-11-201ENST00000408051 138 ntBASIC1.55□□□□□ -2.16
CDH13P55290 MIR1302-9-201ENST00000408365 138 ntBASIC1.55□□□□□ -2.16
CDH13P55290 MIR1302-10-201ENST00000408734 138 ntBASIC1.55□□□□□ -2.16
CDH13P55290 AC245517.4-201ENST00000448601 281 ntBASIC1.55□□□□□ -2.16
CDH13P55290 HSPE1P24-201ENST00000450782 238 ntBASIC1.55□□□□□ -2.16
CDH13P55290 AC099513.1-201ENST00000490423 301 ntBASIC1.55□□□□□ -2.16
CDH13P55290 RNU6-341P-201ENST00000516973 96 ntBASIC1.55□□□□□ -2.16
CDH13P55290 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.55□□□□□ -2.16
CDH13P55290 MIR4423-201ENST00000580922 80 ntBASIC1.55□□□□□ -2.16
CDH13P55290 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
CDH13P55290 AC091178.2-201ENST00000584401 117 ntBASIC1.55□□□□□ -2.16
CDH13P55290 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.55□□□□□ -2.16
CDH13P55290 MIR1302-2-201ENST00000607096 138 ntBASIC1.55□□□□□ -2.16
CDH13P55290 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.55□□□□□ -2.16
CDH13P55290 AC090574.1-201ENST00000623186 233 ntBASIC1.55□□□□□ -2.16
CDH13P55290 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CDH13P55290 Y_RNA.124-201ENST00000363339 93 ntBASIC1.54□□□□□ -2.16
CDH13P55290 Y_RNA.419-201ENST00000384041 102 ntBASIC1.54□□□□□ -2.16
CDH13P55290 Y_RNA.446-201ENST00000384178 104 ntBASIC1.54□□□□□ -2.16
CDH13P55290 Y_RNA.458-201ENST00000384240 102 ntBASIC1.54□□□□□ -2.16
CDH13P55290 SNORA26.9-201ENST00000391322 122 ntBASIC1.54□□□□□ -2.16
CDH13P55290 AL031003.1-201ENST00000404229 172 ntBASIC1.54□□□□□ -2.16
CDH13P55290 AL034345.1-201ENST00000407768 123 ntBASIC1.54□□□□□ -2.16
CDH13P55290 RNU6-1199P-201ENST00000411249 104 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms