Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
ACLYP53396 MIR942-201ENST00000401111 86 ntBASIC0.74□□□□□ -2.29
ACLYP53396 AC093850.1-201ENST00000454121 251 ntBASIC0.74□□□□□ -2.29
ACLYP53396 AC091021.1-201ENST00000468051 388 ntBASIC0.74□□□□□ -2.29
ACLYP53396 RPS26P48-201ENST00000491713 339 ntBASIC0.74□□□□□ -2.29
ACLYP53396 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
ACLYP53396 AP002001.1-203ENST00000534002 267 ntBASIC0.74□□□□□ -2.29
ACLYP53396 AC092954.2-201ENST00000609103 430 ntBASIC0.74□□□□□ -2.29
ACLYP53396 MIR924-201ENST00000638017 53 ntBASIC0.74□□□□□ -2.29
ACLYP53396 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
ACLYP53396 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
ACLYP53396 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
ACLYP53396 SNORA1B-201ENST00000362535 133 ntBASIC0.73□□□□□ -2.29
ACLYP53396 SNORA20B-201ENST00000384220 132 ntBASIC0.73□□□□□ -2.29
ACLYP53396 AC006461.1-201ENST00000412637 326 ntBASIC0.73□□□□□ -2.29
ACLYP53396 RPS3AP1-201ENST00000413190 320 ntBASIC0.73□□□□□ -2.29
ACLYP53396 RNU6-1114P-201ENST00000516022 107 ntBASIC0.73□□□□□ -2.29
ACLYP53396 RNU7-12P-201ENST00000516030 62 ntBASIC0.73□□□□□ -2.29
ACLYP53396 RNU6-341P-201ENST00000516973 96 ntBASIC0.73□□□□□ -2.29
ACLYP53396 RNA5SP330-201ENST00000517096 96 ntBASIC0.73□□□□□ -2.29
ACLYP53396 AP002004.2-201ENST00000531656 154 ntBASIC0.73□□□□□ -2.29
ACLYP53396 NBR2-204ENST00000587322 63 ntBASIC0.73□□□□□ -2.29
ACLYP53396 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.73□□□□□ -2.29
ACLYP53396 AL589743.1-201ENST00000551932 2712 ntBASIC0.73□□□□□ -2.29
ACLYP53396 AC005592.1-201ENST00000566527 1640 ntBASIC0.72□□□□□ -2.29
ACLYP53396 RNU6-451P-201ENST00000362921 107 ntBASIC0.72□□□□□ -2.29
ACLYP53396 RNY3P3-201ENST00000363816 102 ntBASIC0.72□□□□□ -2.29
ACLYP53396 Y_RNA.267-201ENST00000364679 109 ntBASIC0.72□□□□□ -2.29
ACLYP53396 Y_RNA.405-201ENST00000383979 100 ntBASIC0.72□□□□□ -2.29
ACLYP53396 Y_RNA.414-201ENST00000384011 101 ntBASIC0.72□□□□□ -2.29
ACLYP53396 Y_RNA.451-201ENST00000384200 100 ntBASIC0.72□□□□□ -2.29
ACLYP53396 Y_RNA.524-201ENST00000384564 100 ntBASIC0.72□□□□□ -2.29
ACLYP53396 Y_RNA.533-201ENST00000384596 114 ntBASIC0.72□□□□□ -2.29
ACLYP53396 RNU6-306P-201ENST00000384617 107 ntBASIC0.72□□□□□ -2.29
ACLYP53396 Y_RNA.561-201ENST00000384694 100 ntBASIC0.72□□□□□ -2.29
ACLYP53396 MIR608-201ENST00000384820 100 ntBASIC0.72□□□□□ -2.29
ACLYP53396 MIR100-201ENST00000385259 80 ntBASIC0.72□□□□□ -2.29
ACLYP53396 RNA5SP482-201ENST00000391269 118 ntBASIC0.72□□□□□ -2.29
ACLYP53396 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.72□□□□□ -2.29
ACLYP53396 MTND3P23-201ENST00000431980 347 ntBASIC0.72□□□□□ -2.29
ACLYP53396 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.72□□□□□ -2.29
ACLYP53396 AC104332.1-201ENST00000440471 797 ntBASIC0.72□□□□□ -2.29
ACLYP53396 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.72□□□□□ -2.29
ACLYP53396 AC018710.1-201ENST00000506509 158 ntBASIC0.72□□□□□ -2.29
ACLYP53396 AC026407.1-201ENST00000518369 204 ntBASIC0.72□□□□□ -2.29
ACLYP53396 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.72□□□□□ -2.29
ACLYP53396 AL117336.2-201ENST00000602435 335 ntBASIC0.72□□□□□ -2.29
ACLYP53396 AC022079.1-201ENST00000621546 602 ntBASIC0.72□□□□□ -2.29
ACLYP53396 Y_RNA.38-201ENST00000362617 102 ntBASIC0.71□□□□□ -2.3
ACLYP53396 Y_RNA.258-201ENST00000364613 105 ntBASIC0.71□□□□□ -2.3
ACLYP53396 SNORD116-11-201ENST00000383882 92 ntBASIC0.71□□□□□ -2.3
ACLYP53396 RNU6-376P-201ENST00000384731 106 ntBASIC0.71□□□□□ -2.3
ACLYP53396 RNU6-332P-201ENST00000391193 108 ntBASIC0.71□□□□□ -2.3
ACLYP53396 AC018865.2-201ENST00000423631 129 ntBASIC0.71□□□□□ -2.3
ACLYP53396 USMG5P1-201ENST00000425964 177 ntBASIC0.71□□□□□ -2.3
ACLYP53396 USP9YP16-201ENST00000430287 407 ntBASIC0.71□□□□□ -2.3
ACLYP53396 MTATP6P17-201ENST00000431030 672 ntBASIC0.71□□□□□ -2.3
ACLYP53396 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.71□□□□□ -2.3
ACLYP53396 USP9YP23-201ENST00000455085 407 ntBASIC0.71□□□□□ -2.3
ACLYP53396 RNU7-21P-201ENST00000459430 62 ntBASIC0.71□□□□□ -2.3
ACLYP53396 AC046134.1-201ENST00000514454 666 ntBASIC0.71□□□□□ -2.3
ACLYP53396 RNU6-496P-201ENST00000516145 99 ntBASIC0.71□□□□□ -2.3
ACLYP53396 SNORD111.1-201ENST00000516421 86 ntBASIC0.71□□□□□ -2.3
ACLYP53396 MIR3684-201ENST00000579779 74 ntBASIC0.71□□□□□ -2.3
ACLYP53396 AC091178.2-201ENST00000584401 117 ntBASIC0.71□□□□□ -2.3
ACLYP53396 MIR4653-201ENST00000585107 83 ntBASIC0.71□□□□□ -2.3
ACLYP53396 AC004832.4-201ENST00000608952 331 ntBASIC0.71□□□□□ -2.3
ACLYP53396 AC106800.4-201ENST00000614905 153 ntBASIC0.71□□□□□ -2.3
ACLYP53396 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
ACLYP53396 ZNF299P-201ENST00000406845 1804 ntBASIC0.71□□□□□ -2.3
ACLYP53396 MIRLET7C-201ENST00000362160 84 ntBASIC0.7□□□□□ -2.3
ACLYP53396 Y_RNA.51-201ENST00000362725 102 ntBASIC0.7□□□□□ -2.3
ACLYP53396 RNA5SP499-201ENST00000363982 119 ntBASIC0.7□□□□□ -2.3
ACLYP53396 RNU6-1264P-201ENST00000383891 107 ntBASIC0.7□□□□□ -2.3
ACLYP53396 RNU6-281P-201ENST00000384212 103 ntBASIC0.7□□□□□ -2.3
ACLYP53396 Y_RNA.490-201ENST00000384413 102 ntBASIC0.7□□□□□ -2.3
ACLYP53396 SNORA75.2-201ENST00000391138 150 ntBASIC0.7□□□□□ -2.3
ACLYP53396 SNORA75.3-201ENST00000391231 150 ntBASIC0.7□□□□□ -2.3
ACLYP53396 AC098934.3-201ENST00000430450 190 ntBASIC0.7□□□□□ -2.3
ACLYP53396 AC092628.1-201ENST00000436250 252 ntBASIC0.7□□□□□ -2.3
ACLYP53396 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.7□□□□□ -2.3
ACLYP53396 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.7□□□□□ -2.3
ACLYP53396 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.7□□□□□ -2.3
ACLYP53396 AC245047.8-201ENST00000456455 284 ntBASIC0.7□□□□□ -2.3
ACLYP53396 LINC01399-202ENST00000458450 244 ntBASIC0.7□□□□□ -2.3
ACLYP53396 RNA5SP20-201ENST00000515976 84 ntBASIC0.7□□□□□ -2.3
ACLYP53396 Y_RNA.706-201ENST00000516933 99 ntBASIC0.7□□□□□ -2.3
ACLYP53396 AC136628.3-201ENST00000521868 290 ntBASIC0.7□□□□□ -2.3
ACLYP53396 AC093023.1-201ENST00000547375 507 ntBASIC0.7□□□□□ -2.3
ACLYP53396 MIR4273-201ENST00000582824 84 ntBASIC0.7□□□□□ -2.3
ACLYP53396 AC243829.3-201ENST00000622177 108 ntBASIC0.7□□□□□ -2.3
ACLYP53396 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.7□□□□□ -2.3
ACLYP53396 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
ACLYP53396 AC068700.1-201ENST00000565862 3754 ntBASIC0.7□□□□□ -2.3
ACLYP53396 RNU6-222P-201ENST00000362438 107 ntBASIC0.69□□□□□ -2.3
ACLYP53396 SNORA27.1-201ENST00000362604 124 ntBASIC0.69□□□□□ -2.3
ACLYP53396 RNU6-595P-201ENST00000363944 107 ntBASIC0.69□□□□□ -2.3
ACLYP53396 RNU6-407P-201ENST00000365280 104 ntBASIC0.69□□□□□ -2.3
ACLYP53396 RNU6-596P-201ENST00000365395 98 ntBASIC0.69□□□□□ -2.3
ACLYP53396 SNORD116-1-201ENST00000384335 95 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms