Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC092447.9-201ENST00000603395 144 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 AC018714.1-201ENST00000605028 208 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 AC068137.4-201ENST00000638485 296 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 AC121333.1-201ENST00000567488 2709 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 MIR106A-201ENST00000384870 81 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 RNU6-205P-201ENST00000390858 107 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 SNORD28B-201ENST00000390993 75 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 MIR892B-201ENST00000401279 77 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 AL390729.2-201ENST00000416137 156 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 BTF3P11-201ENST00000426582 477 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 GMFBP1-201ENST00000467831 427 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.52□□□□□ -2.49
GTF2A1P52655 AC018710.1-201ENST00000506509 158 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 RNA5SP20-201ENST00000515976 84 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 RN7SKP287-201ENST00000516546 266 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 AC091144.1-201ENST00000519573 138 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.52□□□□□ -2.49
GTF2A1P52655 AC022878.1-201ENST00000530684 149 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.52□□□□□ -2.49
GTF2A1P52655 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 AC064836.2-201ENST00000609491 462 ntBASIC-0.52□□□□□ -2.49
GTF2A1P52655 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 RNU6-873P-201ENST00000363833 107 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 RNA5SP275-201ENST00000363936 118 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 SNORA1.1-201ENST00000364671 133 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 RNU6-407P-201ENST00000365280 104 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 RNU6-117P-201ENST00000365415 107 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 RNU6-784P-201ENST00000384330 106 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 RNU6-83P-201ENST00000384568 112 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 MIR760-201ENST00000390220 80 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 RNU6-269P-201ENST00000391077 97 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 RNU2-54P-201ENST00000410299 190 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 AC096531.1-201ENST00000419107 107 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 AL137792.2-201ENST00000443484 235 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 RNU7-165P-201ENST00000458864 60 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 SCARNA8-201ENST00000515924 131 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 MIR7107-201ENST00000611489 80 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 AL109933.3-201ENST00000619095 188 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 AC022306.3-201ENST00000619930 550 ntBASIC-0.53□□□□□ -2.49
GTF2A1P52655 SNORA27.1-201ENST00000362604 124 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 SNORA18.1-201ENST00000363418 128 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 RNU6-187P-201ENST00000384139 106 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 RNU6-636P-201ENST00000384598 107 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 MIR1-2-201ENST00000384961 85 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.54□□□□□ -2.5
GTF2A1P52655 USP9YP12-201ENST00000450481 570 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 RNU7-102P-201ENST00000458948 62 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.54□□□□□ -2.5
GTF2A1P52655 RNU6-848P-201ENST00000515948 107 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 RNU6-617P-201ENST00000516147 107 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 RNU6-473P-201ENST00000516164 107 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 RNU6-782P-201ENST00000516852 104 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.54□□□□□ -2.5
GTF2A1P52655 AC027807.2-201ENST00000616099 408 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 AL591926.4-201ENST00000616895 298 ntBASIC-0.54□□□□□ -2.5
GTF2A1P52655 SNORA72.1-201ENST00000363485 129 ntBASIC-0.55□□□□□ -2.5
GTF2A1P52655 RNU6-108P-201ENST00000365558 107 ntBASIC-0.55□□□□□ -2.5
GTF2A1P52655 MIR329-2-201ENST00000385029 84 ntBASIC-0.55□□□□□ -2.5
GTF2A1P52655 SSR1P2-201ENST00000415208 787 ntBASIC-0.55□□□□□ -2.5
GTF2A1P52655 SCOCP1-201ENST00000554676 349 ntBASIC-0.55□□□□□ -2.5
GTF2A1P52655 MIR548AR-201ENST00000582191 57 ntBASIC-0.55□□□□□ -2.5
GTF2A1P52655 AP000811.1-201ENST00000603803 651 ntBASIC-0.55□□□□□ -2.5
GTF2A1P52655 U2.17-201ENST00000611454 95 ntBASIC-0.55□□□□□ -2.5
GTF2A1P52655 uc_338.6-201ENST00000613544 171 ntBASIC-0.55□□□□□ -2.5
GTF2A1P52655 RNA5SP117-201ENST00000365294 118 ntBASIC-0.56□□□□□ -2.5
GTF2A1P52655 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.56□□□□□ -2.5
GTF2A1P52655 MIR489-201ENST00000384923 84 ntBASIC-0.56□□□□□ -2.5
GTF2A1P52655 MLLT10P1-201ENST00000418346 262 ntBASIC-0.56□□□□□ -2.5
GTF2A1P52655 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.56□□□□□ -2.5
GTF2A1P52655 MTND4P32-201ENST00000437189 1237 ntBASIC-0.56□□□□□ -2.5
GTF2A1P52655 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.56□□□□□ -2.5
GTF2A1P52655 IGLVI-20-201ENST00000519296 130 ntBASIC-0.56□□□□□ -2.5
GTF2A1P52655 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.56□□□□□ -2.5
GTF2A1P52655 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.56□□□□□ -2.5
GTF2A1P52655 MIR5583-1-201ENST00000580941 59 ntBASIC-0.56□□□□□ -2.5
GTF2A1P52655 AP000753.3-201ENST00000604083 169 ntBASIC-0.56□□□□□ -2.5
GTF2A1P52655 AL021368.1-201ENST00000607490 540 ntBASIC-0.56□□□□□ -2.5
GTF2A1P52655 MIR499B-201ENST00000636498 73 ntBASIC-0.56□□□□□ -2.5
GTF2A1P52655 SNORD114-31-201ENST00000363219 75 ntBASIC-0.57□□□□□ -2.5
GTF2A1P52655 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.57□□□□□ -2.5
GTF2A1P52655 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.57□□□□□ -2.5
GTF2A1P52655 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.57□□□□□ -2.5
GTF2A1P52655 ZNF114P1-201ENST00000453500 292 ntBASIC-0.57□□□□□ -2.5
GTF2A1P52655 AL137161.1-201ENST00000532231 390 ntBASIC-0.57□□□□□ -2.5
GTF2A1P52655 AL158211.1-201ENST00000566763 763 ntBASIC-0.57□□□□□ -2.5
GTF2A1P52655 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.57□□□□□ -2.5
GTF2A1P52655 AC100830.2-201ENST00000581636 240 ntBASIC-0.57□□□□□ -2.5
GTF2A1P52655 AC069431.2-201ENST00000604149 1099 ntBASIC-0.57□□□□□ -2.5
GTF2A1P52655 AL158209.2-201ENST00000619266 216 ntBASIC-0.57□□□□□ -2.5
GTF2A1P52655 RNU6-161P-201ENST00000363051 106 ntBASIC-0.58□□□□□ -2.5
GTF2A1P52655 RNU4-9P-201ENST00000364951 139 ntBASIC-0.58□□□□□ -2.5
GTF2A1P52655 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.58□□□□□ -2.5
GTF2A1P52655 SNORD114-12-201ENST00000365400 75 ntBASIC-0.58□□□□□ -2.5
GTF2A1P52655 RNU6-125P-201ENST00000384505 107 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms