Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CDR1P51861 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CDR1P51861 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.08□□□□□ -1.92
CDR1P51861 AP003122.5-201ENST00000527668 3766 ntBASIC3.08□□□□□ -1.92
CDR1P51861 SNORD45.3-201ENST00000363836 72 ntBASIC3.08□□□□□ -1.92
CDR1P51861 RNA5SP126-201ENST00000365092 109 ntBASIC3.08□□□□□ -1.92
CDR1P51861 RNU6-198P-201ENST00000384258 104 ntBASIC3.08□□□□□ -1.92
CDR1P51861 MIR518C-201ENST00000384822 101 ntBASIC3.08□□□□□ -1.92
CDR1P51861 SNORA12-201ENST00000391162 147 ntBASIC3.08□□□□□ -1.92
CDR1P51861 MIR1278-201ENST00000408753 81 ntBASIC3.08□□□□□ -1.92
CDR1P51861 AL158823.1-201ENST00000418441 478 ntBASIC3.08□□□□□ -1.92
CDR1P51861 UBBP3-201ENST00000445497 241 ntBASIC3.08□□□□□ -1.92
CDR1P51861 AC010099.1-201ENST00000455434 375 ntBASIC3.08□□□□□ -1.92
CDR1P51861 Y_RNA.709-201ENST00000516952 92 ntBASIC3.08□□□□□ -1.92
CDR1P51861 AP000867.2-201ENST00000532468 320 ntBASIC3.08□□□□□ -1.92
CDR1P51861 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.08□□□□□ -1.92
CDR1P51861 AP003357.1-201ENST00000604497 148 ntBASIC3.08□□□□□ -1.92
CDR1P51861 AL670379.2-201ENST00000604983 252 ntBASIC3.08□□□□□ -1.92
CDR1P51861 Y_RNA.43-201ENST00000362670 111 ntBASIC3.07□□□□□ -1.92
CDR1P51861 RNU6-755P-201ENST00000364400 103 ntBASIC3.07□□□□□ -1.92
CDR1P51861 RNU6-1082P-201ENST00000364574 107 ntBASIC3.07□□□□□ -1.92
CDR1P51861 Y_RNA.622-201ENST00000411091 108 ntBASIC3.07□□□□□ -1.92
CDR1P51861 HMGN2P35-201ENST00000412164 270 ntBASIC3.07□□□□□ -1.92
CDR1P51861 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.07□□□□□ -1.92
CDR1P51861 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.07□□□□□ -1.92
CDR1P51861 Z96811.1-201ENST00000445880 108 ntBASIC3.07□□□□□ -1.92
CDR1P51861 AL031183.1-201ENST00000457667 207 ntBASIC3.07□□□□□ -1.92
CDR1P51861 AC112771.1-201ENST00000463581 102 ntBASIC3.07□□□□□ -1.92
CDR1P51861 HMGN2P9-201ENST00000476875 229 ntBASIC3.07□□□□□ -1.92
CDR1P51861 RNU6-1337P-201ENST00000516525 95 ntBASIC3.07□□□□□ -1.92
CDR1P51861 AC090142.3-201ENST00000519012 385 ntBASIC3.07□□□□□ -1.92
CDR1P51861 AC107016.2-201ENST00000547968 190 ntBASIC3.07□□□□□ -1.92
CDR1P51861 AC120024.3-201ENST00000603167 156 ntBASIC3.07□□□□□ -1.92
CDR1P51861 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.07□□□□□ -1.92
CDR1P51861 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.07□□□□□ -1.92
CDR1P51861 AL159152.1-201ENST00000635019 2587 ntBASIC3.06□□□□□ -1.92
CDR1P51861 RNU1-112P-201ENST00000364401 164 ntBASIC3.06□□□□□ -1.92
CDR1P51861 RNU6-1323P-201ENST00000384025 107 ntBASIC3.06□□□□□ -1.92
CDR1P51861 Y_RNA.584-201ENST00000391090 114 ntBASIC3.06□□□□□ -1.92
CDR1P51861 RNA5SP252-201ENST00000391131 119 ntBASIC3.06□□□□□ -1.92
CDR1P51861 AL139095.1-201ENST00000404326 391 ntBASIC3.06□□□□□ -1.92
CDR1P51861 AL590004.2-201ENST00000404787 371 ntBASIC3.06□□□□□ -1.92
CDR1P51861 AL512604.1-201ENST00000404812 257 ntBASIC3.06□□□□□ -1.92
CDR1P51861 AL355796.1-201ENST00000406706 323 ntBASIC3.06□□□□□ -1.92
CDR1P51861 AL357134.1-201ENST00000445848 426 ntBASIC3.06□□□□□ -1.92
CDR1P51861 SNRPGP8-201ENST00000454064 226 ntBASIC3.06□□□□□ -1.92
CDR1P51861 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.06□□□□□ -1.92
CDR1P51861 RNU6-589P-201ENST00000516485 107 ntBASIC3.06□□□□□ -1.92
CDR1P51861 RNA5SP367-201ENST00000516557 118 ntBASIC3.06□□□□□ -1.92
CDR1P51861 AC004486.1-201ENST00000546846 233 ntBASIC3.06□□□□□ -1.92
CDR1P51861 AC079598.5-201ENST00000547460 117 ntBASIC3.06□□□□□ -1.92
CDR1P51861 MIR378D2-201ENST00000580636 98 ntBASIC3.06□□□□□ -1.92
CDR1P51861 AL031274.2-201ENST00000599419 203 ntBASIC3.06□□□□□ -1.92
CDR1P51861 MIR3914-2-201ENST00000637339 95 ntBASIC3.06□□□□□ -1.92
CDR1P51861 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.05□□□□□ -1.92
CDR1P51861 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.05□□□□□ -1.92
CDR1P51861 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CDR1P51861 SNORD56.5-201ENST00000364281 72 ntBASIC3.05□□□□□ -1.92
CDR1P51861 SNORA25.7-201ENST00000364375 127 ntBASIC3.05□□□□□ -1.92
CDR1P51861 SNORD32B-201ENST00000364460 84 ntBASIC3.05□□□□□ -1.92
CDR1P51861 Y_RNA.294-201ENST00000364916 102 ntBASIC3.05□□□□□ -1.92
CDR1P51861 SNORD116-13-201ENST00000384408 92 ntBASIC3.05□□□□□ -1.92
CDR1P51861 SNORA79-201ENST00000408376 140 ntBASIC3.05□□□□□ -1.92
CDR1P51861 AC245047.4-201ENST00000433189 144 ntBASIC3.05□□□□□ -1.92
CDR1P51861 AL121890.1-201ENST00000435457 205 ntBASIC3.05□□□□□ -1.92
CDR1P51861 RPL36AP21-201ENST00000490372 323 ntBASIC3.05□□□□□ -1.92
CDR1P51861 Y_RNA.757-201ENST00000578934 114 ntBASIC3.05□□□□□ -1.92
CDR1P51861 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CDR1P51861 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CDR1P51861 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.05□□□□□ -1.92
CDR1P51861 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDR1P51861 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CDR1P51861 AC010680.1-201ENST00000590024 3590 ntBASIC3.05□□□□□ -1.92
CDR1P51861 MIR449A-201ENST00000362113 91 ntBASIC3.04□□□□□ -1.92
CDR1P51861 SNORA27.1-201ENST00000362604 124 ntBASIC3.04□□□□□ -1.92
CDR1P51861 RNU6-235P-201ENST00000362644 107 ntBASIC3.04□□□□□ -1.92
CDR1P51861 SNORA20B-201ENST00000384220 132 ntBASIC3.04□□□□□ -1.92
CDR1P51861 MIR592-201ENST00000384959 97 ntBASIC3.04□□□□□ -1.92
CDR1P51861 RN7SKP101-201ENST00000411376 320 ntBASIC3.04□□□□□ -1.92
CDR1P51861 CYCSP49-201ENST00000420810 319 ntBASIC3.04□□□□□ -1.92
CDR1P51861 AC016925.1-201ENST00000458303 298 ntBASIC3.04□□□□□ -1.92
CDR1P51861 RNA5SP356-201ENST00000515972 94 ntBASIC3.04□□□□□ -1.92
CDR1P51861 RNU6-772P-201ENST00000516042 105 ntBASIC3.04□□□□□ -1.92
CDR1P51861 SNORA9.3-201ENST00000516383 129 ntBASIC3.04□□□□□ -1.92
CDR1P51861 RNU6-1098P-201ENST00000516772 96 ntBASIC3.04□□□□□ -1.92
CDR1P51861 RNU7-116P-201ENST00000516940 62 ntBASIC3.04□□□□□ -1.92
CDR1P51861 MIR4319-201ENST00000577285 85 ntBASIC3.04□□□□□ -1.92
CDR1P51861 MIR3670-2-201ENST00000582974 65 ntBASIC3.04□□□□□ -1.92
CDR1P51861 MIR3670-1-201ENST00000584160 65 ntBASIC3.04□□□□□ -1.92
CDR1P51861 MIR3670-3-201ENST00000584855 65 ntBASIC3.04□□□□□ -1.92
CDR1P51861 POLR3GP1-201ENST00000594073 261 ntBASIC3.04□□□□□ -1.92
CDR1P51861 MIR3670-4-201ENST00000612260 65 ntBASIC3.04□□□□□ -1.92
CDR1P51861 AL138880.2-201ENST00000616214 239 ntBASIC3.04□□□□□ -1.92
CDR1P51861 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.04□□□□□ -1.92
CDR1P51861 RNU6-271P-201ENST00000363858 105 ntBASIC3.03□□□□□ -1.92
CDR1P51861 MIR181A2-201ENST00000384863 110 ntBASIC3.03□□□□□ -1.92
CDR1P51861 RNA5SP496-201ENST00000391240 109 ntBASIC3.03□□□□□ -1.92
CDR1P51861 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.03□□□□□ -1.92
CDR1P51861 AC087499.2-201ENST00000432861 149 ntBASIC3.03□□□□□ -1.92
CDR1P51861 RNU6-437P-201ENST00000459408 95 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms