Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SNORD87-201ENST00000364849 89 ntBASIC1.88□□□□□ -2.11
CLK1P49759 RNU6-1175P-201ENST00000365200 107 ntBASIC1.88□□□□□ -2.11
CLK1P49759 Y_RNA.446-201ENST00000384178 104 ntBASIC1.88□□□□□ -2.11
CLK1P49759 Y_RNA.477-201ENST00000384352 108 ntBASIC1.88□□□□□ -2.11
CLK1P49759 Y_RNA.539-201ENST00000384635 107 ntBASIC1.88□□□□□ -2.11
CLK1P49759 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.88□□□□□ -2.11
CLK1P49759 MIR320B2-201ENST00000408479 138 ntBASIC1.88□□□□□ -2.11
CLK1P49759 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.88□□□□□ -2.11
CLK1P49759 RNU6-1098P-201ENST00000516772 96 ntBASIC1.88□□□□□ -2.11
CLK1P49759 RNA5SP490-201ENST00000517141 136 ntBASIC1.88□□□□□ -2.11
CLK1P49759 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.88□□□□□ -2.11
CLK1P49759 AC005357.1-201ENST00000588399 301 ntBASIC1.88□□□□□ -2.11
CLK1P49759 AC005176.2-201ENST00000596933 147 ntBASIC1.88□□□□□ -2.11
CLK1P49759 AC022441.3-201ENST00000605737 136 ntBASIC1.88□□□□□ -2.11
CLK1P49759 SNORD113-5-201ENST00000607261 78 ntBASIC1.88□□□□□ -2.11
CLK1P49759 AC011373.1-201ENST00000607270 237 ntBASIC1.88□□□□□ -2.11
CLK1P49759 SNORD11B-201ENST00000607707 90 ntBASIC1.88□□□□□ -2.11
CLK1P49759 MIR8074-201ENST00000615081 81 ntBASIC1.88□□□□□ -2.11
CLK1P49759 AL590240.4-201ENST00000616908 390 ntBASIC1.88□□□□□ -2.11
CLK1P49759 AC078938.1-201ENST00000620993 318 ntBASIC1.88□□□□□ -2.11
CLK1P49759 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.88□□□□□ -2.11
CLK1P49759 AC068205.3-201ENST00000636385 468 ntBASIC1.88□□□□□ -2.11
CLK1P49759 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CLK1P49759 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CLK1P49759 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
CLK1P49759 RNU4-90P-201ENST00000362773 141 ntBASIC1.87□□□□□ -2.11
CLK1P49759 RNA5SP493-201ENST00000364115 91 ntBASIC1.87□□□□□ -2.11
CLK1P49759 RNU6-454P-201ENST00000364292 107 ntBASIC1.87□□□□□ -2.11
CLK1P49759 Y_RNA.416-201ENST00000384014 113 ntBASIC1.87□□□□□ -2.11
CLK1P49759 Y_RNA.489-201ENST00000384410 101 ntBASIC1.87□□□□□ -2.11
CLK1P49759 SNORD58.1-201ENST00000391313 66 ntBASIC1.87□□□□□ -2.11
CLK1P49759 AC019129.1-201ENST00000403786 261 ntBASIC1.87□□□□□ -2.11
CLK1P49759 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.87□□□□□ -2.11
CLK1P49759 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.87□□□□□ -2.11
CLK1P49759 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.87□□□□□ -2.11
CLK1P49759 SEPT14P8-201ENST00000508026 178 ntBASIC1.87□□□□□ -2.11
CLK1P49759 ATP5EP1-201ENST00000510257 156 ntBASIC1.87□□□□□ -2.11
CLK1P49759 MIR449C-201ENST00000516047 92 ntBASIC1.87□□□□□ -2.11
CLK1P49759 Y_RNA.673-201ENST00000516306 88 ntBASIC1.87□□□□□ -2.11
CLK1P49759 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.87□□□□□ -2.11
CLK1P49759 DEFB122-202ENST00000569013 197 ntBASIC1.87□□□□□ -2.11
CLK1P49759 MIR3122-201ENST00000577243 73 ntBASIC1.87□□□□□ -2.11
CLK1P49759 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CLK1P49759 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CLK1P49759 MIR424-201ENST00000362227 98 ntBASIC1.86□□□□□ -2.11
CLK1P49759 Y_RNA.20-201ENST00000362479 113 ntBASIC1.86□□□□□ -2.11
CLK1P49759 RNU6-1264P-201ENST00000383891 107 ntBASIC1.86□□□□□ -2.11
CLK1P49759 Y_RNA.418-201ENST00000384029 102 ntBASIC1.86□□□□□ -2.11
CLK1P49759 Y_RNA.498-201ENST00000384460 102 ntBASIC1.86□□□□□ -2.11
CLK1P49759 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CLK1P49759 RNA5SP100-201ENST00000410903 110 ntBASIC1.86□□□□□ -2.11
CLK1P49759 RNA5SP59-201ENST00000410922 110 ntBASIC1.86□□□□□ -2.11
CLK1P49759 SERF1AP1-201ENST00000514575 187 ntBASIC1.86□□□□□ -2.11
CLK1P49759 RNU7-110P-201ENST00000516891 62 ntBASIC1.86□□□□□ -2.11
CLK1P49759 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.86□□□□□ -2.11
CLK1P49759 RNU1-117P-201ENST00000517041 158 ntBASIC1.86□□□□□ -2.11
CLK1P49759 IGKV3-31-201ENST00000523109 329 ntBASIC1.86□□□□□ -2.11
CLK1P49759 AC091544.4-201ENST00000555268 342 ntBASIC1.86□□□□□ -2.11
CLK1P49759 RPL17P51-201ENST00000605218 238 ntBASIC1.86□□□□□ -2.11
CLK1P49759 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.86□□□□□ -2.11
CLK1P49759 AC004467.1-201ENST00000615678 330 ntBASIC1.86□□□□□ -2.11
CLK1P49759 U2.14-201ENST00000615943 113 ntBASIC1.86□□□□□ -2.11
CLK1P49759 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.86□□□□□ -2.11
CLK1P49759 MIR3674-201ENST00000636576 68 ntBASIC1.86□□□□□ -2.11
CLK1P49759 Y_RNA.257-201ENST00000364596 102 ntBASIC1.85□□□□□ -2.11
CLK1P49759 Y_RNA.352-201ENST00000365439 102 ntBASIC1.85□□□□□ -2.11
CLK1P49759 Y_RNA.478-201ENST00000384358 107 ntBASIC1.85□□□□□ -2.11
CLK1P49759 MIR586-201ENST00000385035 97 ntBASIC1.85□□□□□ -2.11
CLK1P49759 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CLK1P49759 AL603910.2-201ENST00000407268 136 ntBASIC1.85□□□□□ -2.11
CLK1P49759 MIR548H3-201ENST00000408771 118 ntBASIC1.85□□□□□ -2.11
CLK1P49759 RNU2-54P-201ENST00000410299 190 ntBASIC1.85□□□□□ -2.11
CLK1P49759 AL390729.2-201ENST00000416137 156 ntBASIC1.85□□□□□ -2.11
CLK1P49759 AL445646.1-201ENST00000431784 216 ntBASIC1.85□□□□□ -2.11
CLK1P49759 HMGN2P9-201ENST00000476875 229 ntBASIC1.85□□□□□ -2.11
CLK1P49759 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
CLK1P49759 SCARNA24.2-201ENST00000516968 130 ntBASIC1.85□□□□□ -2.11
CLK1P49759 RNU6-111P-201ENST00000517179 105 ntBASIC1.85□□□□□ -2.11
CLK1P49759 RNU2-12P-201ENST00000517216 168 ntBASIC1.85□□□□□ -2.11
CLK1P49759 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.85□□□□□ -2.11
CLK1P49759 MIR4643-201ENST00000577473 78 ntBASIC1.85□□□□□ -2.11
CLK1P49759 MIR4648-201ENST00000580107 72 ntBASIC1.85□□□□□ -2.11
CLK1P49759 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
CLK1P49759 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.85□□□□□ -2.11
CLK1P49759 AC025754.2-201ENST00000606491 432 ntBASIC1.85□□□□□ -2.11
CLK1P49759 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.85□□□□□ -2.11
CLK1P49759 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLK1P49759 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CLK1P49759 RNU6-1266P-201ENST00000362794 105 ntBASIC1.84□□□□□ -2.11
CLK1P49759 Y_RNA.136-201ENST00000363444 102 ntBASIC1.84□□□□□ -2.11
CLK1P49759 U3.8-201ENST00000363675 217 ntBASIC1.84□□□□□ -2.11
CLK1P49759 Y_RNA.331-201ENST00000365267 102 ntBASIC1.84□□□□□ -2.11
CLK1P49759 RNU6-326P-201ENST00000365480 107 ntBASIC1.84□□□□□ -2.11
CLK1P49759 RNU6-338P-201ENST00000383888 105 ntBASIC1.84□□□□□ -2.11
CLK1P49759 RNU6-21P-201ENST00000384710 107 ntBASIC1.84□□□□□ -2.11
CLK1P49759 MIR548B-201ENST00000385247 97 ntBASIC1.84□□□□□ -2.11
CLK1P49759 RNU2-14P-201ENST00000411053 191 ntBASIC1.84□□□□□ -2.11
CLK1P49759 RNU6-847P-201ENST00000411115 108 ntBASIC1.84□□□□□ -2.11
CLK1P49759 MRPS10P1-201ENST00000448483 130 ntBASIC1.84□□□□□ -2.11
CLK1P49759 NDUFB4P10-201ENST00000452541 359 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms