Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 OOSP1P1-201ENST00000423265 274 ntBASIC2.11□□□□□ -2.07
SOX2P48431 RPS20P10-201ENST00000451209 253 ntBASIC2.11□□□□□ -2.07
SOX2P48431 Y_RNA.637-201ENST00000459424 114 ntBASIC2.11□□□□□ -2.07
SOX2P48431 COX6CP14-201ENST00000469580 174 ntBASIC2.11□□□□□ -2.07
SOX2P48431 MIR3200-201ENST00000580767 85 ntBASIC2.11□□□□□ -2.07
SOX2P48431 MIR5694-201ENST00000581190 76 ntBASIC2.11□□□□□ -2.07
SOX2P48431 AL353149.1-201ENST00000610667 244 ntBASIC2.11□□□□□ -2.07
SOX2P48431 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.11□□□□□ -2.07
SOX2P48431 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SOX2P48431 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SOX2P48431 Y_RNA.83-201ENST00000363005 113 ntBASIC2.1□□□□□ -2.07
SOX2P48431 RNU1-22P-201ENST00000363334 158 ntBASIC2.1□□□□□ -2.07
SOX2P48431 Y_RNA.199-201ENST00000364014 102 ntBASIC2.1□□□□□ -2.07
SOX2P48431 RNY4P28-201ENST00000365281 93 ntBASIC2.1□□□□□ -2.07
SOX2P48431 MIR518C-201ENST00000384822 101 ntBASIC2.1□□□□□ -2.07
SOX2P48431 SNORA40.19-201ENST00000390846 128 ntBASIC2.1□□□□□ -2.07
SOX2P48431 SNORA26.5-201ENST00000391215 123 ntBASIC2.1□□□□□ -2.07
SOX2P48431 Y_RNA.626-201ENST00000411288 95 ntBASIC2.1□□□□□ -2.07
SOX2P48431 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.1□□□□□ -2.07
SOX2P48431 HSPE1P21-201ENST00000438283 308 ntBASIC2.1□□□□□ -2.07
SOX2P48431 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.1□□□□□ -2.07
SOX2P48431 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.1□□□□□ -2.07
SOX2P48431 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.1□□□□□ -2.07
SOX2P48431 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.1□□□□□ -2.07
SOX2P48431 AC097462.1-201ENST00000514125 324 ntBASIC2.1□□□□□ -2.07
SOX2P48431 RNU6-138P-201ENST00000515952 107 ntBASIC2.1□□□□□ -2.07
SOX2P48431 RNU6-1278P-201ENST00000516130 107 ntBASIC2.1□□□□□ -2.07
SOX2P48431 RNU7-172P-201ENST00000517125 64 ntBASIC2.1□□□□□ -2.07
SOX2P48431 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.1□□□□□ -2.07
SOX2P48431 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.1□□□□□ -2.07
SOX2P48431 MIR4513-201ENST00000581077 86 ntBASIC2.1□□□□□ -2.07
SOX2P48431 AC005000.2-201ENST00000605468 310 ntBASIC2.1□□□□□ -2.07
SOX2P48431 SNORD14A-201ENST00000606526 91 ntBASIC2.1□□□□□ -2.07
SOX2P48431 AL008718.3-201ENST00000610217 321 ntBASIC2.1□□□□□ -2.07
SOX2P48431 U6.73-201ENST00000619194 103 ntBASIC2.1□□□□□ -2.07
SOX2P48431 MIR338-201ENST00000636369 67 ntBASIC2.1□□□□□ -2.07
SOX2P48431 RNU1-58P-201ENST00000362413 163 ntBASIC2.09□□□□□ -2.07
SOX2P48431 Y_RNA.172-201ENST00000363765 102 ntBASIC2.09□□□□□ -2.07
SOX2P48431 RNU6-899P-201ENST00000363947 107 ntBASIC2.09□□□□□ -2.07
SOX2P48431 SNORD114-30-201ENST00000364448 72 ntBASIC2.09□□□□□ -2.07
SOX2P48431 SNORD116-13-201ENST00000384408 92 ntBASIC2.09□□□□□ -2.07
SOX2P48431 MIR27B-201ENST00000385129 97 ntBASIC2.09□□□□□ -2.07
SOX2P48431 MTCO2P33-201ENST00000402100 465 ntBASIC2.09□□□□□ -2.07
SOX2P48431 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.09□□□□□ -2.07
SOX2P48431 U8.19-201ENST00000459095 133 ntBASIC2.09□□□□□ -2.07
SOX2P48431 RPL36AP21-201ENST00000490372 323 ntBASIC2.09□□□□□ -2.07
SOX2P48431 RPS29P21-201ENST00000496272 170 ntBASIC2.09□□□□□ -2.07
SOX2P48431 YWHAEP4-201ENST00000505390 198 ntBASIC2.09□□□□□ -2.07
SOX2P48431 RNA5SP320-201ENST00000516263 124 ntBASIC2.09□□□□□ -2.07
SOX2P48431 RNU6-63P-201ENST00000516690 95 ntBASIC2.09□□□□□ -2.07
SOX2P48431 AP005660.1-201ENST00000522972 293 ntBASIC2.09□□□□□ -2.07
SOX2P48431 MIR3169-201ENST00000578032 83 ntBASIC2.09□□□□□ -2.07
SOX2P48431 AC007229.1-201ENST00000590455 412 ntBASIC2.09□□□□□ -2.07
SOX2P48431 AC004832.4-201ENST00000608952 331 ntBASIC2.09□□□□□ -2.07
SOX2P48431 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.09□□□□□ -2.07
SOX2P48431 AC068647.2-201ENST00000637380 353 ntBASIC2.09□□□□□ -2.07
SOX2P48431 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.09□□□□□ -2.08
SOX2P48431 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SOX2P48431 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SOX2P48431 AC005336.3-201ENST00000623833 2679 ntBASIC2.08□□□□□ -2.08
SOX2P48431 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SOX2P48431 AC134026.1-201ENST00000623249 2239 ntBASIC2.08□□□□□ -2.08
SOX2P48431 RNU6-1048P-201ENST00000364054 107 ntBASIC2.08□□□□□ -2.08
SOX2P48431 Y_RNA.274-201ENST00000364714 101 ntBASIC2.08□□□□□ -2.08
SOX2P48431 Y_RNA.297-201ENST00000364950 91 ntBASIC2.08□□□□□ -2.08
SOX2P48431 RNU6-1186P-201ENST00000410429 97 ntBASIC2.08□□□□□ -2.08
SOX2P48431 AL049873.1-201ENST00000480540 376 ntBASIC2.08□□□□□ -2.08
SOX2P48431 SNORA31.11-201ENST00000516528 139 ntBASIC2.08□□□□□ -2.08
SOX2P48431 Y_RNA.700-201ENST00000516806 100 ntBASIC2.08□□□□□ -2.08
SOX2P48431 AC013791.1-201ENST00000616619 62 ntBASIC2.08□□□□□ -2.08
SOX2P48431 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SOX2P48431 AC080100.1-201ENST00000624239 5356 ntBASIC2.07□□□□□ -2.08
SOX2P48431 MIR411-201ENST00000362239 96 ntBASIC2.07□□□□□ -2.08
SOX2P48431 MIRLET7G-201ENST00000362280 84 ntBASIC2.07□□□□□ -2.08
SOX2P48431 RNU4-13P-201ENST00000364019 141 ntBASIC2.07□□□□□ -2.08
SOX2P48431 SNORA3A-201ENST00000364113 130 ntBASIC2.07□□□□□ -2.08
SOX2P48431 RNU1-96P-201ENST00000364163 162 ntBASIC2.07□□□□□ -2.08
SOX2P48431 Y_RNA.262-201ENST00000364641 102 ntBASIC2.07□□□□□ -2.08
SOX2P48431 Y_RNA.304-201ENST00000365011 112 ntBASIC2.07□□□□□ -2.08
SOX2P48431 RNU6-117P-201ENST00000365415 107 ntBASIC2.07□□□□□ -2.08
SOX2P48431 RNU6-376P-201ENST00000384731 106 ntBASIC2.07□□□□□ -2.08
SOX2P48431 MIR515-2-201ENST00000384883 83 ntBASIC2.07□□□□□ -2.08
SOX2P48431 MIR515-1-201ENST00000384884 83 ntBASIC2.07□□□□□ -2.08
SOX2P48431 RNU11-5P-201ENST00000391216 129 ntBASIC2.07□□□□□ -2.08
SOX2P48431 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.07□□□□□ -2.08
SOX2P48431 BX510359.4-201ENST00000423750 193 ntBASIC2.07□□□□□ -2.08
SOX2P48431 MTND5P15-201ENST00000434246 349 ntBASIC2.07□□□□□ -2.08
SOX2P48431 RPS15AP28-201ENST00000435088 386 ntBASIC2.07□□□□□ -2.08
SOX2P48431 AC104332.1-201ENST00000440471 797 ntBASIC2.07□□□□□ -2.08
SOX2P48431 AL138752.1-201ENST00000452964 351 ntBASIC2.07□□□□□ -2.08
SOX2P48431 RNU7-141P-201ENST00000459304 62 ntBASIC2.07□□□□□ -2.08
SOX2P48431 SNORA59A-201ENST00000459326 152 ntBASIC2.07□□□□□ -2.08
SOX2P48431 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.07□□□□□ -2.08
SOX2P48431 MIR5692C2-201ENST00000577959 77 ntBASIC2.07□□□□□ -2.08
SOX2P48431 ELOCP29-201ENST00000588193 334 ntBASIC2.07□□□□□ -2.08
SOX2P48431 AC005972.2-201ENST00000604690 348 ntBASIC2.07□□□□□ -2.08
SOX2P48431 AC011921.3-201ENST00000605540 361 ntBASIC2.07□□□□□ -2.08
SOX2P48431 AC067747.1-201ENST00000608026 250 ntBASIC2.07□□□□□ -2.08
SOX2P48431 AL359075.3-201ENST00000613288 217 ntBASIC2.07□□□□□ -2.08
SOX2P48431 U4.3-201ENST00000621047 82 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms