Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MTND3P8-201ENST00000412909 339 ntBASIC0.9□□□□□ -2.27
CXCL12P48061 EIF1P2-201ENST00000428233 350 ntBASIC0.9□□□□□ -2.27
CXCL12P48061 AL353997.1-201ENST00000432936 108 ntBASIC0.9□□□□□ -2.27
CXCL12P48061 MRPS10P1-201ENST00000448483 130 ntBASIC0.9□□□□□ -2.27
CXCL12P48061 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.9□□□□□ -2.27
CXCL12P48061 RNU7-87P-201ENST00000459343 62 ntBASIC0.9□□□□□ -2.27
CXCL12P48061 RPS27P22-201ENST00000478056 241 ntBASIC0.9□□□□□ -2.27
CXCL12P48061 RPL30P7-201ENST00000479312 323 ntBASIC0.9□□□□□ -2.27
CXCL12P48061 AC010469.2-201ENST00000496412 480 ntBASIC0.9□□□□□ -2.27
CXCL12P48061 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.9□□□□□ -2.27
CXCL12P48061 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.9□□□□□ -2.27
CXCL12P48061 AL512310.8-201ENST00000550183 120 ntBASIC0.9□□□□□ -2.27
CXCL12P48061 AL121579.1-201ENST00000555129 305 ntBASIC0.9□□□□□ -2.27
CXCL12P48061 AC090617.3-201ENST00000573670 475 ntBASIC0.9□□□□□ -2.27
CXCL12P48061 AL021879.1-201ENST00000611756 288 ntBASIC0.9□□□□□ -2.27
CXCL12P48061 AL357075.2-201ENST00000614906 189 ntBASIC0.9□□□□□ -2.27
CXCL12P48061 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.9□□□□□ -2.27
CXCL12P48061 RNA5SP327-201ENST00000362494 101 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 RNA5SP361-201ENST00000362686 118 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 Y_RNA.557-201ENST00000384680 107 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 MIR329-1-201ENST00000385028 80 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.89□□□□□ -2.27
CXCL12P48061 AC074085.1-201ENST00000413598 418 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 MTND1P4-201ENST00000435196 415 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 U8.22-201ENST00000459141 133 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 OR2A41P-201ENST00000473586 105 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 RPL7P42-201ENST00000481005 679 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.89□□□□□ -2.27
CXCL12P48061 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.89□□□□□ -2.27
CXCL12P48061 AC046134.1-201ENST00000514454 666 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.89□□□□□ -2.27
CXCL12P48061 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.89□□□□□ -2.27
CXCL12P48061 AC004584.2-201ENST00000570407 410 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 MIR4714-201ENST00000580728 77 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 AC009229.3-201ENST00000608056 282 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 AC108706.1-201ENST00000611053 297 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 AC068137.4-201ENST00000638485 296 ntBASIC0.89□□□□□ -2.27
CXCL12P48061 RNY1P16-201ENST00000363063 111 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 Y_RNA.339-201ENST00000365325 102 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 Y_RNA.364-201ENST00000365532 101 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 SNORA20B-201ENST00000384220 132 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 RNU6-601P-201ENST00000384540 107 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 MIR193B-201ENST00000384907 83 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 AL355796.1-201ENST00000406706 323 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.88□□□□□ -2.27
CXCL12P48061 ELOCP21-201ENST00000412558 336 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.88□□□□□ -2.27
CXCL12P48061 AC004941.2-201ENST00000427009 228 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 PGBD4P5-201ENST00000445958 426 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 UQCRBP2-201ENST00000447827 297 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 MTND3P10-201ENST00000450967 341 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 AC018710.1-201ENST00000506509 158 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 AC010598.1-201ENST00000510378 103 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.88□□□□□ -2.27
CXCL12P48061 AC105029.1-201ENST00000520250 669 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 AC060780.3-201ENST00000589464 80 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 AC068790.6-201ENST00000602558 258 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.88□□□□□ -2.27
CXCL12P48061 Y_RNA.88-201ENST00000363029 99 ntBASIC0.87□□□□□ -2.27
CXCL12P48061 RNU6-879P-201ENST00000364328 108 ntBASIC0.87□□□□□ -2.27
CXCL12P48061 SNORA22-201ENST00000383907 134 ntBASIC0.87□□□□□ -2.27
CXCL12P48061 Y_RNA.404-201ENST00000383978 102 ntBASIC0.87□□□□□ -2.27
CXCL12P48061 SNORA70.7-201ENST00000384159 133 ntBASIC0.87□□□□□ -2.27
CXCL12P48061 RNU6-1145P-201ENST00000384246 107 ntBASIC0.87□□□□□ -2.27
CXCL12P48061 SNORA22C-201ENST00000384614 134 ntBASIC0.87□□□□□ -2.27
CXCL12P48061 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CXCL12P48061 RNU6-700P-201ENST00000391043 107 ntBASIC0.87□□□□□ -2.27
CXCL12P48061 FCF1P9-201ENST00000412546 282 ntBASIC0.87□□□□□ -2.27
CXCL12P48061 POLR2J4-204ENST00000418424 324 ntBASIC0.87□□□□□ -2.27
CXCL12P48061 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.87□□□□□ -2.27
CXCL12P48061 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.87□□□□□ -2.27
CXCL12P48061 RNU6-358P-201ENST00000516564 75 ntBASIC0.87□□□□□ -2.27
CXCL12P48061 Y_RNA.708-201ENST00000516950 96 ntBASIC0.87□□□□□ -2.27
CXCL12P48061 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.87□□□□□ -2.27
CXCL12P48061 MIR3664-201ENST00000579074 99 ntBASIC0.87□□□□□ -2.27
CXCL12P48061 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.87□□□□□ -2.27
CXCL12P48061 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.87□□□□□ -2.27
CXCL12P48061 RNU6-593P-201ENST00000364716 112 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 Y_RNA.358-201ENST00000365491 99 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 AL034345.1-201ENST00000407768 123 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 STAG3L5P-204ENST00000443759 179 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.86□□□□□ -2.27
CXCL12P48061 AC107399.1-201ENST00000451226 265 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 AL133373.1-201ENST00000497098 94 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 AC097462.1-201ENST00000514125 324 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 RNU7-40P-201ENST00000516397 64 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 RN7SKP88-201ENST00000516847 250 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 RNU7-172P-201ENST00000517125 64 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 AC022868.1-201ENST00000517767 391 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 RAB11AP2-201ENST00000545905 639 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 MIR1273G-201ENST00000577677 100 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 7SK.8-201ENST00000612110 250 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 7SK.11-201ENST00000615477 250 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 AC073349.3-201ENST00000617616 186 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 MIR6513-201ENST00000621188 64 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 7SK.13-201ENST00000622040 250 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 AC106754.2-201ENST00000623006 233 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 AC139792.2-201ENST00000624218 587 ntBASIC0.86□□□□□ -2.27
CXCL12P48061 AC006435.5-201ENST00000624486 112 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms