Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.67□□□□□ -2.3
BRCA1P38398 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.67□□□□□ -2.3
BRCA1P38398 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.67□□□□□ -2.3
BRCA1P38398 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.67□□□□□ -2.3
BRCA1P38398 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.67□□□□□ -2.3
BRCA1P38398 NBR2-204ENST00000587322 63 ntBASIC0.67□□□□□ -2.3
BRCA1P38398 AL359880.1-201ENST00000621879 266 ntBASIC0.67□□□□□ -2.3
BRCA1P38398 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
BRCA1P38398 Y_RNA.51-201ENST00000362725 102 ntBASIC0.66□□□□□ -2.3
BRCA1P38398 RNU6-1266P-201ENST00000362794 105 ntBASIC0.66□□□□□ -2.3
BRCA1P38398 Y_RNA.372-201ENST00000365599 102 ntBASIC0.66□□□□□ -2.3
BRCA1P38398 RNU6-483P-201ENST00000384088 108 ntBASIC0.66□□□□□ -2.3
BRCA1P38398 AC114482.1-201ENST00000418010 247 ntBASIC0.66□□□□□ -2.3
BRCA1P38398 UBE2V1P7-201ENST00000446395 340 ntBASIC0.66□□□□□ -2.3
BRCA1P38398 AC098826.2-201ENST00000452011 651 ntBASIC0.66□□□□□ -2.3
BRCA1P38398 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.66□□□□□ -2.3
BRCA1P38398 RNU6-341P-201ENST00000516973 96 ntBASIC0.66□□□□□ -2.3
BRCA1P38398 AC136628.3-201ENST00000521868 290 ntBASIC0.66□□□□□ -2.3
BRCA1P38398 MIR5695-201ENST00000579717 85 ntBASIC0.66□□□□□ -2.3
BRCA1P38398 MIR3611-201ENST00000584484 83 ntBASIC0.66□□□□□ -2.3
BRCA1P38398 AC097520.1-201ENST00000624435 385 ntBASIC0.66□□□□□ -2.3
BRCA1P38398 SNORA33-201ENST00000363664 130 ntBASIC0.65□□□□□ -2.3
BRCA1P38398 RNU4-76P-201ENST00000364509 141 ntBASIC0.65□□□□□ -2.3
BRCA1P38398 MIR942-201ENST00000401111 86 ntBASIC0.65□□□□□ -2.3
BRCA1P38398 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.65□□□□□ -2.3
BRCA1P38398 AC093303.1-201ENST00000514549 295 ntBASIC0.65□□□□□ -2.3
BRCA1P38398 RNA5SP20-201ENST00000515976 84 ntBASIC0.65□□□□□ -2.3
BRCA1P38398 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.65□□□□□ -2.3
BRCA1P38398 PRELID3BP2-201ENST00000605362 201 ntBASIC0.65□□□□□ -2.3
BRCA1P38398 FAM157A-202ENST00000615155 405 ntBASIC0.65□□□□□ -2.3
BRCA1P38398 SEPT14P17-201ENST00000617978 177 ntBASIC0.65□□□□□ -2.3
BRCA1P38398 CASC19-280ENST00000642102 1351 ntBASIC0.65□□□□□ -2.31
BRCA1P38398 RNU6-1084P-201ENST00000362498 107 ntBASIC0.65□□□□□ -2.31
BRCA1P38398 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
BRCA1P38398 AC098934.3-201ENST00000430450 190 ntBASIC0.65□□□□□ -2.31
BRCA1P38398 MTATP6P13-201ENST00000438531 667 ntBASIC0.65□□□□□ -2.31
BRCA1P38398 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.65□□□□□ -2.31
BRCA1P38398 PSMC1P5-201ENST00000512850 177 ntBASIC0.65□□□□□ -2.31
BRCA1P38398 AC136932.1-201ENST00000574771 208 ntBASIC0.65□□□□□ -2.31
BRCA1P38398 AC025627.3-201ENST00000582078 182 ntBASIC0.65□□□□□ -2.31
BRCA1P38398 MIR4273-201ENST00000582824 84 ntBASIC0.65□□□□□ -2.31
BRCA1P38398 AC010999.1-201ENST00000611856 324 ntBASIC0.65□□□□□ -2.31
BRCA1P38398 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
BRCA1P38398 RNU6-222P-201ENST00000362438 107 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 SNORD50.1-201ENST00000362987 71 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 Y_RNA.100-201ENST00000363141 102 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 RNU4-9P-201ENST00000364951 139 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 Y_RNA.319-201ENST00000365138 92 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 RNU6-596P-201ENST00000365395 98 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 RNU6-1145P-201ENST00000384246 107 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 U8.16-201ENST00000391279 133 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 AC091021.1-201ENST00000468051 388 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 SNORA40.12-201ENST00000516329 111 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 SNORA31.10-201ENST00000516482 106 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 AC023157.2-201ENST00000540596 141 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 AC245505.1-201ENST00000556398 224 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 AC097065.2-201ENST00000608159 533 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 MIR6086-201ENST00000638065 55 ntBASIC0.64□□□□□ -2.31
BRCA1P38398 RNY1P16-201ENST00000363063 111 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 SNORD99-201ENST00000408612 74 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 MRPS10P2-201ENST00000431226 381 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 MTND1P1-201ENST00000445453 368 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 RPL30P10-201ENST00000488148 337 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.63□□□□□ -2.31
BRCA1P38398 Y_RNA.665-201ENST00000516177 98 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 RNU1-117P-201ENST00000517041 158 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 AC022868.1-201ENST00000517767 391 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 MTND1P15-201ENST00000579262 949 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 AC124303.1-201ENST00000605703 360 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 Y_RNA.274-201ENST00000364714 101 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 RNU4-20P-201ENST00000365601 151 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 RNU6-376P-201ENST00000384731 106 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 RNU6-780P-201ENST00000391030 104 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 AC016909.1-201ENST00000415916 166 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 U7.7-201ENST00000459276 60 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.63□□□□□ -2.31
BRCA1P38398 RNU6-256P-201ENST00000516747 97 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 AL358944.1-201ENST00000528537 144 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 AC006380.1-201ENST00000603598 186 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 AF250324.2-201ENST00000608299 610 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 MIR1321-201ENST00000637766 79 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 AC024614.3-201ENST00000637860 256 ntBASIC0.63□□□□□ -2.31
BRCA1P38398 SNORD116-11-201ENST00000383882 92 ntBASIC0.62□□□□□ -2.31
BRCA1P38398 Y_RNA.412-201ENST00000384001 104 ntBASIC0.62□□□□□ -2.31
BRCA1P38398 RNU6-793P-201ENST00000384233 104 ntBASIC0.62□□□□□ -2.31
BRCA1P38398 SNORD116-13-201ENST00000384408 92 ntBASIC0.62□□□□□ -2.31
BRCA1P38398 MTCO3P40-201ENST00000392516 676 ntBASIC0.62□□□□□ -2.31
BRCA1P38398 ELOCP21-201ENST00000412558 336 ntBASIC0.62□□□□□ -2.31
BRCA1P38398 AL606490.4-201ENST00000423117 127 ntBASIC0.62□□□□□ -2.31
BRCA1P38398 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.62□□□□□ -2.31
BRCA1P38398 AC107401.1-201ENST00000503426 685 ntBASIC0.62□□□□□ -2.31
BRCA1P38398 ACA64.5-201ENST00000516207 127 ntBASIC0.62□□□□□ -2.31
BRCA1P38398 SNORA62.5-201ENST00000516634 120 ntBASIC0.62□□□□□ -2.31
BRCA1P38398 RNU6-922P-201ENST00000516753 99 ntBASIC0.62□□□□□ -2.31
BRCA1P38398 AC092954.2-201ENST00000609103 430 ntBASIC0.62□□□□□ -2.31
BRCA1P38398 MIRLET7C-201ENST00000362160 84 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 Y_RNA.184-201ENST00000363884 108 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 SNORA2.2-201ENST00000365473 135 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 Y_RNA.415-201ENST00000384012 112 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms