Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AF186996.7-201ENST00000492781 209 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 AC091885.1-201ENST00000506658 268 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 SNORA25.12-201ENST00000516202 82 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 SNORD111.1-201ENST00000516421 86 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 AL358944.1-201ENST00000528537 144 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 MIR548AX-201ENST00000580117 73 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 MIR4300-201ENST00000581016 96 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 AL117336.2-201ENST00000602435 335 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 AL096861.1-201ENST00000610899 123 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.11□□□□□ -2.39
COL4A5P29400 Y_RNA.100-201ENST00000363141 102 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 RNU6-1335P-201ENST00000365426 107 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 MIR518A1-201ENST00000385068 85 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 MIR153-2-201ENST00000385225 87 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 ELOCP24-201ENST00000456370 334 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 RNA5SP67-201ENST00000516422 131 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 MTND1P5-201ENST00000517906 940 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.11□□□□□ -2.39
COL4A5P29400 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.11□□□□□ -2.39
COL4A5P29400 AC027288.2-201ENST00000553028 243 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 AC016597.2-201ENST00000613256 341 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 AC009248.2-201ENST00000619826 254 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 MIR4315-1-201ENST00000636800 73 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 MIR4315-2-201ENST00000640925 73 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 AC005592.1-201ENST00000566527 1640 ntBASIC0.1□□□□□ -2.39
COL4A5P29400 SNORA1B-201ENST00000362535 133 ntBASIC0.1□□□□□ -2.39
COL4A5P29400 Y_RNA.184-201ENST00000363884 108 ntBASIC0.1□□□□□ -2.39
COL4A5P29400 RNU6-790P-201ENST00000384479 105 ntBASIC0.1□□□□□ -2.39
COL4A5P29400 RNY3P9-201ENST00000384727 106 ntBASIC0.1□□□□□ -2.39
COL4A5P29400 MTND2P18-201ENST00000419962 1030 ntBASIC0.1□□□□□ -2.39
COL4A5P29400 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.1□□□□□ -2.39
COL4A5P29400 MTND4LP26-201ENST00000518144 282 ntBASIC0.1□□□□□ -2.39
COL4A5P29400 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.1□□□□□ -2.39
COL4A5P29400 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.1□□□□□ -2.39
COL4A5P29400 AC103705.1-201ENST00000619013 241 ntBASIC0.1□□□□□ -2.39
COL4A5P29400 AC073534.2-201ENST00000620377 381 ntBASIC0.1□□□□□ -2.39
COL4A5P29400 AC008873.1-201ENST00000625051 138 ntBASIC0.1□□□□□ -2.39
COL4A5P29400 FER-210ENST00000628534 558 ntTSL 5 BASIC0.1□□□□□ -2.39
COL4A5P29400 MIR6079-201ENST00000635807 62 ntBASIC0.1□□□□□ -2.39
COL4A5P29400 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
COL4A5P29400 MIRLET7C-201ENST00000362160 84 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 SNORA25.3-201ENST00000363205 127 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 RNU6-727P-201ENST00000363592 107 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 RNU6-873P-201ENST00000363833 107 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 Y_RNA.336-201ENST00000365307 109 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 MIR1185-1-201ENST00000408598 86 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 RNU6-325P-201ENST00000411132 105 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.09□□□□□ -2.39
COL4A5P29400 MTCYBP8-201ENST00000422855 651 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 snoU13.25-201ENST00000458945 104 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 AC091021.1-201ENST00000468051 388 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 RPL23AP54-201ENST00000495129 419 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 AC107401.1-201ENST00000503426 685 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 AC074133.1-201ENST00000515696 183 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 RNU7-43P-201ENST00000516554 64 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 RNU7-128P-201ENST00000517247 62 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.09□□□□□ -2.39
COL4A5P29400 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.09□□□□□ -2.39
COL4A5P29400 MIR3913-1-201ENST00000577744 102 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 AC092354.1-201ENST00000606057 376 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 AC022960.3-201ENST00000619794 441 ntBASIC0.09□□□□□ -2.39
COL4A5P29400 Y_RNA.159-201ENST00000363674 87 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 SNORA2B-201ENST00000384583 137 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 RNY3P10-201ENST00000384764 102 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
COL4A5P29400 RNA5SP219-201ENST00000390940 113 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.08□□□□□ -2.4
COL4A5P29400 MTCO2P34-201ENST00000421994 607 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 HMGN2P22-201ENST00000427588 175 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 MTCO2P11-201ENST00000431069 680 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 AL359672.1-201ENST00000442302 409 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 PCMTD1P1-201ENST00000455560 355 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 RPS3AP17-201ENST00000472594 777 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 MTCO1P29-201ENST00000496868 288 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 MRPS36P3-201ENST00000519284 130 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 AP003716.2-201ENST00000528260 108 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 MIR3684-201ENST00000579779 74 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 AL133215.3-201ENST00000609801 448 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 AC017083.3-201ENST00000609955 700 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 AL355073.2-201ENST00000612106 557 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 AC079248.2-201ENST00000623779 326 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 AC007494.3-201ENST00000624660 743 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 MIR411-201ENST00000362239 96 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 SNORD115-32-201ENST00000364079 82 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 RNU6-407P-201ENST00000365280 104 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 RNU6-282P-201ENST00000365357 103 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 MIR520G-201ENST00000385064 90 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 MIR1298-201ENST00000408783 112 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 RNA5SP475-201ENST00000410568 110 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.08□□□□□ -2.4
COL4A5P29400 MTND1P27-201ENST00000451117 902 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 PCNPP5-201ENST00000452246 481 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 MTCO2P18-201ENST00000457151 658 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.08□□□□□ -2.4
COL4A5P29400 RNU6-107P-201ENST00000516643 102 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 RNU6-1332P-201ENST00000516666 104 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 Y_RNA.714-201ENST00000517065 90 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 MTCO2P4-201ENST00000517968 247 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms