Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.73□□□□□ -2.13
SHC1P29353 AP006437.1-201ENST00000641440 3685 ntBASIC1.72□□□□□ -2.13
SHC1P29353 SNORD27-201ENST00000363981 72 ntBASIC1.72□□□□□ -2.13
SHC1P29353 RNU6-743P-201ENST00000364151 106 ntBASIC1.72□□□□□ -2.13
SHC1P29353 SNORA72.2-201ENST00000365028 127 ntBASIC1.72□□□□□ -2.13
SHC1P29353 Y_RNA.383-201ENST00000383855 97 ntBASIC1.72□□□□□ -2.13
SHC1P29353 Y_RNA.418-201ENST00000384029 102 ntBASIC1.72□□□□□ -2.13
SHC1P29353 RNU6-1310P-201ENST00000384153 107 ntBASIC1.72□□□□□ -2.13
SHC1P29353 Y_RNA.489-201ENST00000384410 101 ntBASIC1.72□□□□□ -2.13
SHC1P29353 Y_RNA.569-201ENST00000384749 103 ntBASIC1.72□□□□□ -2.13
SHC1P29353 MIR17-201ENST00000385012 84 ntBASIC1.72□□□□□ -2.13
SHC1P29353 MIR586-201ENST00000385035 97 ntBASIC1.72□□□□□ -2.13
SHC1P29353 MIR561-201ENST00000385216 97 ntBASIC1.72□□□□□ -2.13
SHC1P29353 MIR1283-1-201ENST00000408494 87 ntBASIC1.72□□□□□ -2.13
SHC1P29353 RPL23AP36-201ENST00000413895 458 ntBASIC1.72□□□□□ -2.13
SHC1P29353 HMGN2P3-201ENST00000433603 273 ntBASIC1.72□□□□□ -2.13
SHC1P29353 HMGN2P5-201ENST00000436882 273 ntBASIC1.72□□□□□ -2.13
SHC1P29353 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
SHC1P29353 MRPS10P1-201ENST00000448483 130 ntBASIC1.72□□□□□ -2.13
SHC1P29353 AC005042.3-201ENST00000453230 174 ntBASIC1.72□□□□□ -2.13
SHC1P29353 AC018868.1-201ENST00000491307 315 ntBASIC1.72□□□□□ -2.13
SHC1P29353 RNU6-111P-201ENST00000517179 105 ntBASIC1.72□□□□□ -2.13
SHC1P29353 RNU6-794P-201ENST00000517261 64 ntBASIC1.72□□□□□ -2.13
SHC1P29353 MIR3145-201ENST00000580727 82 ntBASIC1.72□□□□□ -2.13
SHC1P29353 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.72□□□□□ -2.13
SHC1P29353 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.72□□□□□ -2.13
SHC1P29353 AC008873.1-201ENST00000625051 138 ntBASIC1.72□□□□□ -2.13
SHC1P29353 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
SHC1P29353 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.71□□□□□ -2.14
SHC1P29353 Y_RNA.20-201ENST00000362479 113 ntBASIC1.71□□□□□ -2.14
SHC1P29353 Y_RNA.277-201ENST00000364754 102 ntBASIC1.71□□□□□ -2.14
SHC1P29353 SNORA20.1-201ENST00000364790 130 ntBASIC1.71□□□□□ -2.14
SHC1P29353 RNU6-326P-201ENST00000365480 107 ntBASIC1.71□□□□□ -2.14
SHC1P29353 RNU6-338P-201ENST00000383888 105 ntBASIC1.71□□□□□ -2.14
SHC1P29353 Y_RNA.416-201ENST00000384014 113 ntBASIC1.71□□□□□ -2.14
SHC1P29353 RNU6-1026P-201ENST00000384465 108 ntBASIC1.71□□□□□ -2.14
SHC1P29353 MIR504-201ENST00000385065 83 ntBASIC1.71□□□□□ -2.14
SHC1P29353 RNU2-54P-201ENST00000410299 190 ntBASIC1.71□□□□□ -2.14
SHC1P29353 RNU6-651P-201ENST00000411040 105 ntBASIC1.71□□□□□ -2.14
SHC1P29353 RNU2-14P-201ENST00000411053 191 ntBASIC1.71□□□□□ -2.14
SHC1P29353 AL356379.1-201ENST00000414105 126 ntBASIC1.71□□□□□ -2.14
SHC1P29353 AL390729.2-201ENST00000416137 156 ntBASIC1.71□□□□□ -2.14
SHC1P29353 AC016717.1-201ENST00000448918 286 ntBASIC1.71□□□□□ -2.14
SHC1P29353 NDUFB4P10-201ENST00000452541 359 ntBASIC1.71□□□□□ -2.14
SHC1P29353 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.71□□□□□ -2.14
SHC1P29353 RNU6-436P-201ENST00000516171 114 ntBASIC1.71□□□□□ -2.14
SHC1P29353 RNU6-155P-201ENST00000516347 100 ntBASIC1.71□□□□□ -2.14
SHC1P29353 RNU2-31P-201ENST00000516954 155 ntBASIC1.71□□□□□ -2.14
SHC1P29353 AC022616.8-201ENST00000533569 253 ntBASIC1.71□□□□□ -2.14
SHC1P29353 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.71□□□□□ -2.14
SHC1P29353 RPL21P9-201ENST00000556149 474 ntBASIC1.71□□□□□ -2.14
SHC1P29353 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SHC1P29353 U3.8-201ENST00000363675 217 ntBASIC1.7□□□□□ -2.14
SHC1P29353 SNORD31B-201ENST00000364977 69 ntBASIC1.7□□□□□ -2.14
SHC1P29353 Y_RNA.352-201ENST00000365439 102 ntBASIC1.7□□□□□ -2.14
SHC1P29353 SNORA25B-201ENST00000365507 128 ntBASIC1.7□□□□□ -2.14
SHC1P29353 RNU6-418P-201ENST00000384035 107 ntBASIC1.7□□□□□ -2.14
SHC1P29353 SNORD14D-201ENST00000384390 87 ntBASIC1.7□□□□□ -2.14
SHC1P29353 MIR1185-2-201ENST00000408687 86 ntBASIC1.7□□□□□ -2.14
SHC1P29353 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.7□□□□□ -2.14
SHC1P29353 ZNF355P-201ENST00000427301 3216 ntBASIC1.7□□□□□ -2.14
SHC1P29353 MTCO1P5-201ENST00000433573 344 ntBASIC1.7□□□□□ -2.14
SHC1P29353 RNU7-57P-201ENST00000459540 60 ntBASIC1.7□□□□□ -2.14
SHC1P29353 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.7□□□□□ -2.14
SHC1P29353 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SHC1P29353 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.7□□□□□ -2.14
SHC1P29353 U6.115-201ENST00000636045 103 ntBASIC1.7□□□□□ -2.14
SHC1P29353 AL356292.1-201ENST00000283110 373 ntBASIC1.69□□□□□ -2.14
SHC1P29353 Y_RNA.54-201ENST00000362766 105 ntBASIC1.69□□□□□ -2.14
SHC1P29353 RNU6-1266P-201ENST00000362794 105 ntBASIC1.69□□□□□ -2.14
SHC1P29353 Y_RNA.136-201ENST00000363444 102 ntBASIC1.69□□□□□ -2.14
SHC1P29353 Y_RNA.243-201ENST00000364481 109 ntBASIC1.69□□□□□ -2.14
SHC1P29353 Y_RNA.257-201ENST00000364596 102 ntBASIC1.69□□□□□ -2.14
SHC1P29353 Y_RNA.329-201ENST00000365209 107 ntBASIC1.69□□□□□ -2.14
SHC1P29353 RNU6-975P-201ENST00000384296 105 ntBASIC1.69□□□□□ -2.14
SHC1P29353 SNORD58.1-201ENST00000391313 66 ntBASIC1.69□□□□□ -2.14
SHC1P29353 MIR300-201ENST00000401138 83 ntBASIC1.69□□□□□ -2.14
SHC1P29353 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
SHC1P29353 POLR2KP2-201ENST00000438155 177 ntBASIC1.69□□□□□ -2.14
SHC1P29353 AC016925.1-201ENST00000458303 298 ntBASIC1.69□□□□□ -2.14
SHC1P29353 RPS29P11-201ENST00000496507 171 ntBASIC1.69□□□□□ -2.14
SHC1P29353 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.69□□□□□ -2.14
SHC1P29353 SNORA4.4-201ENST00000515921 135 ntBASIC1.69□□□□□ -2.14
SHC1P29353 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.69□□□□□ -2.14
SHC1P29353 DEFB117-201ENST00000602356 141 ntBASIC1.69□□□□□ -2.14
SHC1P29353 MIR7843-201ENST00000622274 79 ntBASIC1.69□□□□□ -2.14
SHC1P29353 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SHC1P29353 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.69□□□□□ -2.14
SHC1P29353 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
SHC1P29353 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
SHC1P29353 MIR340-201ENST00000362125 95 ntBASIC1.68□□□□□ -2.14
SHC1P29353 Y_RNA.65-201ENST00000362846 100 ntBASIC1.68□□□□□ -2.14
SHC1P29353 Y_RNA.76-201ENST00000362931 109 ntBASIC1.68□□□□□ -2.14
SHC1P29353 SNORD115-30-201ENST00000364117 82 ntBASIC1.68□□□□□ -2.14
SHC1P29353 Y_RNA.269-201ENST00000364685 89 ntBASIC1.68□□□□□ -2.14
SHC1P29353 RNU6-740P-201ENST00000364734 105 ntBASIC1.68□□□□□ -2.14
SHC1P29353 Y_RNA.478-201ENST00000384358 107 ntBASIC1.68□□□□□ -2.14
SHC1P29353 SNORA53-201ENST00000391141 249 ntBASIC1.68□□□□□ -2.14
SHC1P29353 HMGN2P39-201ENST00000398005 273 ntBASIC1.68□□□□□ -2.14
SHC1P29353 MIR548H3-201ENST00000408771 118 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms