Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.53□□□□□ -2
CD40P25942 Y_RNA.180-201ENST00000363867 113 ntBASIC2.53□□□□□ -2
CD40P25942 Y_RNA.238-201ENST00000364441 102 ntBASIC2.53□□□□□ -2
CD40P25942 SNORA72-201ENST00000384339 132 ntBASIC2.53□□□□□ -2
CD40P25942 MIR526A2-201ENST00000390198 65 ntBASIC2.53□□□□□ -2
CD40P25942 AC099677.2-201ENST00000436385 175 ntBASIC2.53□□□□□ -2
CD40P25942 RNU6-437P-201ENST00000459408 95 ntBASIC2.53□□□□□ -2
CD40P25942 RN7SL633P-201ENST00000488974 297 ntBASIC2.53□□□□□ -2
CD40P25942 AC074198.2-201ENST00000508153 258 ntBASIC2.53□□□□□ -2
CD40P25942 RNU6-1096P-201ENST00000517089 102 ntBASIC2.53□□□□□ -2
CD40P25942 AL033523.1-201ENST00000605153 153 ntBASIC2.53□□□□□ -2
CD40P25942 U6.108-201ENST00000637764 58 ntBASIC2.53□□□□□ -2
CD40P25942 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CD40P25942 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CD40P25942 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CD40P25942 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CD40P25942 SNORA8-201ENST00000384574 139 ntBASIC2.52□□□□□ -2.01
CD40P25942 MIR597-201ENST00000384968 97 ntBASIC2.52□□□□□ -2.01
CD40P25942 CST2P1-201ENST00000425770 87 ntBASIC2.52□□□□□ -2.01
CD40P25942 AL135938.1-201ENST00000443141 297 ntBASIC2.52□□□□□ -2.01
CD40P25942 AC091021.1-201ENST00000468051 388 ntBASIC2.52□□□□□ -2.01
CD40P25942 Y_RNA.662-201ENST00000516028 97 ntBASIC2.52□□□□□ -2.01
CD40P25942 RN7SKP164-201ENST00000516138 266 ntBASIC2.52□□□□□ -2.01
CD40P25942 RNA5SP367-201ENST00000516557 118 ntBASIC2.52□□□□□ -2.01
CD40P25942 RNA5SP380-201ENST00000517190 98 ntBASIC2.52□□□□□ -2.01
CD40P25942 AC245166.1-201ENST00000521012 253 ntBASIC2.52□□□□□ -2.01
CD40P25942 SNORD14A-201ENST00000606526 91 ntBASIC2.52□□□□□ -2.01
CD40P25942 AC022513.1-201ENST00000624512 117 ntBASIC2.52□□□□□ -2.01
CD40P25942 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.52□□□□□ -2.01
CD40P25942 AL161431.1-201ENST00000618966 4205 ntBASIC2.52□□□□□ -2.01
CD40P25942 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CD40P25942 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CD40P25942 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.51□□□□□ -2.01
CD40P25942 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.51□□□□□ -2.01
CD40P25942 MIR148B-201ENST00000362252 99 ntBASIC2.51□□□□□ -2.01
CD40P25942 SNORA5B-201ENST00000363786 132 ntBASIC2.51□□□□□ -2.01
CD40P25942 Y_RNA.182-201ENST00000363880 111 ntBASIC2.51□□□□□ -2.01
CD40P25942 SNORA46-201ENST00000384762 135 ntBASIC2.51□□□□□ -2.01
CD40P25942 RNU11-3P-201ENST00000391111 133 ntBASIC2.51□□□□□ -2.01
CD40P25942 AL451074.5-201ENST00000415894 435 ntBASIC2.51□□□□□ -2.01
CD40P25942 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.51□□□□□ -2.01
CD40P25942 AC245047.8-201ENST00000456455 284 ntBASIC2.51□□□□□ -2.01
CD40P25942 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.51□□□□□ -2.01
CD40P25942 AC011604.1-201ENST00000545978 196 ntBASIC2.51□□□□□ -2.01
CD40P25942 ELOCP29-201ENST00000588193 334 ntBASIC2.51□□□□□ -2.01
CD40P25942 AL929325.1-201ENST00000603096 117 ntBASIC2.51□□□□□ -2.01
CD40P25942 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.51□□□□□ -2.01
CD40P25942 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.51□□□□□ -2.01
CD40P25942 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CD40P25942 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CD40P25942 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.5□□□□□ -2.01
CD40P25942 MIR515-2-201ENST00000384883 83 ntBASIC2.5□□□□□ -2.01
CD40P25942 MIR515-1-201ENST00000384884 83 ntBASIC2.5□□□□□ -2.01
CD40P25942 MIR520G-201ENST00000385064 90 ntBASIC2.5□□□□□ -2.01
CD40P25942 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.5□□□□□ -2.01
CD40P25942 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.5□□□□□ -2.01
CD40P25942 AC018634.1-201ENST00000437554 401 ntBASIC2.5□□□□□ -2.01
CD40P25942 UQCRHP3-201ENST00000451503 251 ntBASIC2.5□□□□□ -2.01
CD40P25942 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.5□□□□□ -2.01
CD40P25942 RNU6-1007P-201ENST00000516586 107 ntBASIC2.5□□□□□ -2.01
CD40P25942 RNU6-453P-201ENST00000516819 85 ntBASIC2.5□□□□□ -2.01
CD40P25942 AC005786.1-201ENST00000588553 154 ntBASIC2.5□□□□□ -2.01
CD40P25942 MIR6079-201ENST00000635807 62 ntBASIC2.5□□□□□ -2.01
CD40P25942 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CD40P25942 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.5□□□□□ -2.01
CD40P25942 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
CD40P25942 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CD40P25942 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.49□□□□□ -2.01
CD40P25942 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CD40P25942 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CD40P25942 Y_RNA.121-201ENST00000363309 113 ntBASIC2.49□□□□□ -2.01
CD40P25942 Y_RNA.229-201ENST00000364347 113 ntBASIC2.49□□□□□ -2.01
CD40P25942 Y_RNA.240-201ENST00000364469 95 ntBASIC2.49□□□□□ -2.01
CD40P25942 DYNLT3P1-201ENST00000378574 347 ntBASIC2.49□□□□□ -2.01
CD40P25942 Y_RNA.412-201ENST00000384001 104 ntBASIC2.49□□□□□ -2.01
CD40P25942 Y_RNA.510-201ENST00000384511 114 ntBASIC2.49□□□□□ -2.01
CD40P25942 MIR518A2-201ENST00000384966 87 ntBASIC2.49□□□□□ -2.01
CD40P25942 RNU11-5P-201ENST00000391216 129 ntBASIC2.49□□□□□ -2.01
CD40P25942 HMGN2P39-201ENST00000398005 273 ntBASIC2.49□□□□□ -2.01
CD40P25942 MIR887-201ENST00000401258 79 ntBASIC2.49□□□□□ -2.01
CD40P25942 MIR1278-201ENST00000408753 81 ntBASIC2.49□□□□□ -2.01
CD40P25942 SNORA11.4-201ENST00000408823 129 ntBASIC2.49□□□□□ -2.01
CD40P25942 Y_RNA.621-201ENST00000411065 96 ntBASIC2.49□□□□□ -2.01
CD40P25942 RNA5SP270-201ENST00000411361 118 ntBASIC2.49□□□□□ -2.01
CD40P25942 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.49□□□□□ -2.01
CD40P25942 AC233266.1-201ENST00000454518 96 ntBASIC2.49□□□□□ -2.01
CD40P25942 SNORA59A-201ENST00000459326 152 ntBASIC2.49□□□□□ -2.01
CD40P25942 TRBV12-1-201ENST00000479785 344 ntBASIC2.49□□□□□ -2.01
CD40P25942 AL163195.1-201ENST00000496941 348 ntBASIC2.49□□□□□ -2.01
CD40P25942 SCARNA8-201ENST00000515924 131 ntBASIC2.49□□□□□ -2.01
CD40P25942 Y_RNA.797-201ENST00000515977 94 ntBASIC2.49□□□□□ -2.01
CD40P25942 RNU6-1291P-201ENST00000516591 104 ntBASIC2.49□□□□□ -2.01
CD40P25942 GTF3AP2-201ENST00000557014 266 ntBASIC2.49□□□□□ -2.01
CD40P25942 MIR5688-201ENST00000580619 83 ntBASIC2.49□□□□□ -2.01
CD40P25942 AC091178.2-201ENST00000584401 117 ntBASIC2.49□□□□□ -2.01
CD40P25942 AC242852.1-201ENST00000612151 96 ntBASIC2.49□□□□□ -2.01
CD40P25942 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.49□□□□□ -2.01
CD40P25942 AC244015.1-201ENST00000622301 99 ntBASIC2.49□□□□□ -2.01
CD40P25942 U6.106-201ENST00000636360 105 ntBASIC2.49□□□□□ -2.01
CD40P25942 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 644.1 ms