Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 U4.1-201ENST00000620349 87 ntBASIC2.11□□□□□ -2.07
RXRAP19793 SDR42E1P4-201ENST00000620894 481 ntBASIC2.11□□□□□ -2.07
RXRAP19793 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RXRAP19793 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
RXRAP19793 AC092881.1-201ENST00000638218 2733 ntBASIC2.11□□□□□ -2.07
RXRAP19793 RNU1-96P-201ENST00000364163 162 ntBASIC2.1□□□□□ -2.07
RXRAP19793 Y_RNA.276-201ENST00000364732 109 ntBASIC2.1□□□□□ -2.07
RXRAP19793 Y_RNA.458-201ENST00000384240 102 ntBASIC2.1□□□□□ -2.07
RXRAP19793 RPL21P1-201ENST00000399532 476 ntBASIC2.1□□□□□ -2.07
RXRAP19793 MIR1253-201ENST00000408273 105 ntBASIC2.1□□□□□ -2.07
RXRAP19793 RNA5SP100-201ENST00000410903 110 ntBASIC2.1□□□□□ -2.07
RXRAP19793 RNA5SP59-201ENST00000410922 110 ntBASIC2.1□□□□□ -2.07
RXRAP19793 RNA5SP489-201ENST00000410986 109 ntBASIC2.1□□□□□ -2.07
RXRAP19793 CYCSP49-201ENST00000420810 319 ntBASIC2.1□□□□□ -2.07
RXRAP19793 RPEP5-201ENST00000441137 268 ntBASIC2.1□□□□□ -2.07
RXRAP19793 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.1□□□□□ -2.07
RXRAP19793 SUMO1P2-201ENST00000452524 304 ntBASIC2.1□□□□□ -2.07
RXRAP19793 RNA5SP233-201ENST00000459153 113 ntBASIC2.1□□□□□ -2.07
RXRAP19793 AC010598.1-201ENST00000510378 103 ntBASIC2.1□□□□□ -2.07
RXRAP19793 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.1□□□□□ -2.07
RXRAP19793 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RXRAP19793 AC004817.2-201ENST00000561794 651 ntBASIC2.1□□□□□ -2.07
RXRAP19793 AC022254.1-201ENST00000567857 235 ntBASIC2.1□□□□□ -2.07
RXRAP19793 MIR4419B-201ENST00000577260 68 ntBASIC2.1□□□□□ -2.07
RXRAP19793 MIR4287-201ENST00000579398 78 ntBASIC2.1□□□□□ -2.07
RXRAP19793 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.1□□□□□ -2.07
RXRAP19793 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.1□□□□□ -2.07
RXRAP19793 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.1□□□□□ -2.07
RXRAP19793 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.1□□□□□ -2.07
RXRAP19793 ZNF355P-201ENST00000427301 3216 ntBASIC2.1□□□□□ -2.07
RXRAP19793 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.1□□□□□ -2.07
RXRAP19793 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
RXRAP19793 Y_RNA.193-201ENST00000363979 102 ntBASIC2.09□□□□□ -2.07
RXRAP19793 Y_RNA.214-201ENST00000364201 112 ntBASIC2.09□□□□□ -2.07
RXRAP19793 Y_RNA.230-201ENST00000364348 109 ntBASIC2.09□□□□□ -2.07
RXRAP19793 RNU6-1019P-201ENST00000364424 107 ntBASIC2.09□□□□□ -2.07
RXRAP19793 RNU6-702P-201ENST00000364982 107 ntBASIC2.09□□□□□ -2.07
RXRAP19793 SNORA72.2-201ENST00000365028 127 ntBASIC2.09□□□□□ -2.07
RXRAP19793 RNU6-505P-201ENST00000384427 107 ntBASIC2.09□□□□□ -2.07
RXRAP19793 RNU6-713P-201ENST00000384761 107 ntBASIC2.09□□□□□ -2.07
RXRAP19793 SUMO2P12-201ENST00000405924 140 ntBASIC2.09□□□□□ -2.07
RXRAP19793 AC244636.1-201ENST00000421152 228 ntBASIC2.09□□□□□ -2.07
RXRAP19793 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.09□□□□□ -2.07
RXRAP19793 ELOCP20-201ENST00000422460 345 ntBASIC2.09□□□□□ -2.07
RXRAP19793 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.09□□□□□ -2.07
RXRAP19793 AL731563.1-201ENST00000442202 214 ntBASIC2.09□□□□□ -2.07
RXRAP19793 DYNLT3P2-201ENST00000442517 295 ntBASIC2.09□□□□□ -2.07
RXRAP19793 SNORA40.15-201ENST00000516884 107 ntBASIC2.09□□□□□ -2.07
RXRAP19793 RNU6-295P-201ENST00000516901 104 ntBASIC2.09□□□□□ -2.07
RXRAP19793 RNU6-897P-201ENST00000517135 105 ntBASIC2.09□□□□□ -2.07
RXRAP19793 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.09□□□□□ -2.07
RXRAP19793 AC024995.1-201ENST00000523014 93 ntBASIC2.09□□□□□ -2.07
RXRAP19793 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.09□□□□□ -2.07
RXRAP19793 MIR5094-201ENST00000578766 85 ntBASIC2.09□□□□□ -2.07
RXRAP19793 U6.115-201ENST00000636045 103 ntBASIC2.09□□□□□ -2.07
RXRAP19793 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
RXRAP19793 SNORD114-7-201ENST00000362520 77 ntBASIC2.08□□□□□ -2.08
RXRAP19793 Y_RNA.243-201ENST00000364481 109 ntBASIC2.08□□□□□ -2.08
RXRAP19793 Y_RNA.361-201ENST00000365515 120 ntBASIC2.08□□□□□ -2.08
RXRAP19793 Y_RNA.401-201ENST00000383965 117 ntBASIC2.08□□□□□ -2.08
RXRAP19793 RNU6-417P-201ENST00000384712 107 ntBASIC2.08□□□□□ -2.08
RXRAP19793 RNU6-130P-201ENST00000411112 103 ntBASIC2.08□□□□□ -2.08
RXRAP19793 AC245047.4-201ENST00000433189 144 ntBASIC2.08□□□□□ -2.08
RXRAP19793 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.08□□□□□ -2.08
RXRAP19793 Y_RNA.713-201ENST00000517013 96 ntBASIC2.08□□□□□ -2.08
RXRAP19793 RNU2-12P-201ENST00000517216 168 ntBASIC2.08□□□□□ -2.08
RXRAP19793 AL137100.2-201ENST00000555786 315 ntBASIC2.08□□□□□ -2.08
RXRAP19793 AC055872.1-201ENST00000570978 278 ntBASIC2.08□□□□□ -2.08
RXRAP19793 MIR4299-201ENST00000577899 72 ntBASIC2.08□□□□□ -2.08
RXRAP19793 MIR4423-201ENST00000580922 80 ntBASIC2.08□□□□□ -2.08
RXRAP19793 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.08□□□□□ -2.08
RXRAP19793 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.08□□□□□ -2.08
RXRAP19793 AC011476.5-201ENST00000615594 130 ntBASIC2.08□□□□□ -2.08
RXRAP19793 AC084768.2-201ENST00000622736 221 ntBASIC2.08□□□□□ -2.08
RXRAP19793 RNA5SP432-201ENST00000362480 116 ntBASIC2.07□□□□□ -2.08
RXRAP19793 RNU6-626P-201ENST00000363354 107 ntBASIC2.07□□□□□ -2.08
RXRAP19793 RNU6-112P-201ENST00000363599 104 ntBASIC2.07□□□□□ -2.08
RXRAP19793 RNU6-20P-201ENST00000384106 107 ntBASIC2.07□□□□□ -2.08
RXRAP19793 Y_RNA.462-201ENST00000384268 102 ntBASIC2.07□□□□□ -2.08
RXRAP19793 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.07□□□□□ -2.08
RXRAP19793 AC010409.1-201ENST00000487382 476 ntBASIC2.07□□□□□ -2.08
RXRAP19793 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.07□□□□□ -2.08
RXRAP19793 RNY3P15-201ENST00000516297 97 ntBASIC2.07□□□□□ -2.08
RXRAP19793 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.07□□□□□ -2.08
RXRAP19793 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.07□□□□□ -2.08
RXRAP19793 MIR3671-201ENST00000580455 88 ntBASIC2.07□□□□□ -2.08
RXRAP19793 MIR4524B-201ENST00000581569 115 ntBASIC2.07□□□□□ -2.08
RXRAP19793 AC005176.2-201ENST00000596933 147 ntBASIC2.07□□□□□ -2.08
RXRAP19793 Y_RNA.772-201ENST00000606692 102 ntBASIC2.07□□□□□ -2.08
RXRAP19793 AC004467.1-201ENST00000615678 330 ntBASIC2.07□□□□□ -2.08
RXRAP19793 U6.73-201ENST00000619194 103 ntBASIC2.07□□□□□ -2.08
RXRAP19793 MIR8062-201ENST00000621515 85 ntBASIC2.07□□□□□ -2.08
RXRAP19793 AC091932.3-201ENST00000624223 323 ntBASIC2.07□□□□□ -2.08
RXRAP19793 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
RXRAP19793 Y_RNA.19-201ENST00000362462 99 ntBASIC2.06□□□□□ -2.08
RXRAP19793 Y_RNA.26-201ENST00000362539 101 ntBASIC2.06□□□□□ -2.08
RXRAP19793 Y_RNA.183-201ENST00000363882 113 ntBASIC2.06□□□□□ -2.08
RXRAP19793 RNU6-770P-201ENST00000363929 105 ntBASIC2.06□□□□□ -2.08
RXRAP19793 SNORA63D-201ENST00000364359 132 ntBASIC2.06□□□□□ -2.08
RXRAP19793 RNU6-806P-201ENST00000365147 105 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms