Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXC6P09630 AL449363.1-201ENST00000617815 186 ntBASIC2.22□□□□□ -2.05
HOXC6P09630 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.22□□□□□ -2.05
HOXC6P09630 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
HOXC6P09630 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.22□□□□□ -2.05
HOXC6P09630 Y_RNA.164-201ENST00000363709 102 ntBASIC2.21□□□□□ -2.06
HOXC6P09630 RNU6-324P-201ENST00000363957 106 ntBASIC2.21□□□□□ -2.06
HOXC6P09630 RNU6-200P-201ENST00000364743 107 ntBASIC2.21□□□□□ -2.06
HOXC6P09630 MIR1294-201ENST00000408503 142 ntBASIC2.21□□□□□ -2.06
HOXC6P09630 AC023141.11-201ENST00000508864 202 ntBASIC2.21□□□□□ -2.06
HOXC6P09630 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.21□□□□□ -2.06
HOXC6P09630 AC108729.3-201ENST00000513484 108 ntBASIC2.21□□□□□ -2.06
HOXC6P09630 SNORA27.4-201ENST00000516650 95 ntBASIC2.21□□□□□ -2.06
HOXC6P09630 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.21□□□□□ -2.06
HOXC6P09630 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.21□□□□□ -2.06
HOXC6P09630 AC005828.6-201ENST00000606610 232 ntBASIC2.21□□□□□ -2.06
HOXC6P09630 AC037487.3-201ENST00000606668 112 ntBASIC2.21□□□□□ -2.06
HOXC6P09630 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.21□□□□□ -2.06
HOXC6P09630 MIR1248-201ENST00000629190 106 ntBASIC2.21□□□□□ -2.06
HOXC6P09630 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HOXC6P09630 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HOXC6P09630 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HOXC6P09630 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXC6P09630 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
HOXC6P09630 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
HOXC6P09630 Y_RNA.122-201ENST00000363331 96 ntBASIC2.2□□□□□ -2.06
HOXC6P09630 RNU6-1264P-201ENST00000383891 107 ntBASIC2.2□□□□□ -2.06
HOXC6P09630 SNORD14D-201ENST00000384390 87 ntBASIC2.2□□□□□ -2.06
HOXC6P09630 RNU6-1289P-201ENST00000384431 106 ntBASIC2.2□□□□□ -2.06
HOXC6P09630 RNU6-220P-201ENST00000390919 107 ntBASIC2.2□□□□□ -2.06
HOXC6P09630 U3.40-201ENST00000408706 208 ntBASIC2.2□□□□□ -2.06
HOXC6P09630 MIR1298-201ENST00000408783 112 ntBASIC2.2□□□□□ -2.06
HOXC6P09630 AC080013.2-201ENST00000460866 323 ntBASIC2.2□□□□□ -2.06
HOXC6P09630 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC6P09630 HMGB3P3-201ENST00000510526 400 ntBASIC2.2□□□□□ -2.06
HOXC6P09630 RNU6-436P-201ENST00000516171 114 ntBASIC2.2□□□□□ -2.06
HOXC6P09630 RNU2-12P-201ENST00000517216 168 ntBASIC2.2□□□□□ -2.06
HOXC6P09630 AC105245.1-201ENST00000581934 244 ntBASIC2.2□□□□□ -2.06
HOXC6P09630 MIR6895-201ENST00000613497 78 ntBASIC2.2□□□□□ -2.06
HOXC6P09630 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
HOXC6P09630 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXC6P09630 Y_RNA.136-201ENST00000363444 102 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 RNU6-743P-201ENST00000364151 106 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 RNY1-201ENST00000364228 113 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 Y_RNA.275-201ENST00000364726 110 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 Y_RNA.297-201ENST00000364950 91 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 RNU6-234P-201ENST00000365229 104 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 RNU6-514P-201ENST00000384208 107 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 U6atac.2-201ENST00000408644 118 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 RNU2-64P-201ENST00000411315 191 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 AC009310.1-201ENST00000414414 451 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 AL445685.2-201ENST00000422551 342 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 AC016717.1-201ENST00000448918 286 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXC6P09630 RNU4-71P-201ENST00000516258 113 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 RNU6-191P-201ENST00000516295 94 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 SNORA31.11-201ENST00000516528 139 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 IGLV3-17-201ENST00000519099 244 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 AC121758.2-201ENST00000553271 193 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXC6P09630 AL512605.2-201ENST00000592972 256 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 AL162424.1-201ENST00000602325 221 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 snoU13.31-201ENST00000607291 104 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 AC069294.1-201ENST00000608397 350 ntBASIC2.19□□□□□ -2.06
HOXC6P09630 RNU1-23P-201ENST00000363361 144 ntBASIC2.18□□□□□ -2.06
HOXC6P09630 SNORA38-201ENST00000363946 132 ntBASIC2.18□□□□□ -2.06
HOXC6P09630 Y_RNA.200-201ENST00000364018 102 ntBASIC2.18□□□□□ -2.06
HOXC6P09630 Y_RNA.292-201ENST00000364904 97 ntBASIC2.18□□□□□ -2.06
HOXC6P09630 RNA5SP37-201ENST00000365420 130 ntBASIC2.18□□□□□ -2.06
HOXC6P09630 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.18□□□□□ -2.06
HOXC6P09630 AC025033.1-201ENST00000463883 194 ntBASIC2.18□□□□□ -2.06
HOXC6P09630 HMGN2P9-201ENST00000476875 229 ntBASIC2.18□□□□□ -2.06
HOXC6P09630 RPL23AP63-201ENST00000498752 471 ntBASIC2.18□□□□□ -2.06
HOXC6P09630 RNY3P16-201ENST00000516338 101 ntBASIC2.18□□□□□ -2.06
HOXC6P09630 MIR4255-201ENST00000579351 72 ntBASIC2.18□□□□□ -2.06
HOXC6P09630 MIR5694-201ENST00000581190 76 ntBASIC2.18□□□□□ -2.06
HOXC6P09630 AC006380.1-201ENST00000603598 186 ntBASIC2.18□□□□□ -2.06
HOXC6P09630 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HOXC6P09630 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXC6P09630 UBE2WP1-201ENST00000362030 340 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 U3.8-201ENST00000363675 217 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 Y_RNA.199-201ENST00000364014 102 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 RNA5SP160-201ENST00000364866 120 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 RNU6-1072P-201ENST00000384703 107 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 RNU6-443P-201ENST00000384780 107 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 Y_RNA.590-201ENST00000410140 107 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 RNU2-61P-201ENST00000411069 191 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 RNU2-32P-201ENST00000411193 191 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 Y_RNA.626-201ENST00000411288 95 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXC6P09630 RPL23AP7-203ENST00000449021 469 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 AL021397.1-201ENST00000451806 248 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXC6P09630 PRELID3BP1-201ENST00000457142 540 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 RNU7-57P-201ENST00000459540 60 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 Y_RNA.679-201ENST00000516416 91 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 SNORA81.3-201ENST00000517283 198 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 MIR4658-201ENST00000584344 65 ntBASIC2.17□□□□□ -2.06
HOXC6P09630 AC011921.3-201ENST00000605540 361 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms