Protein–RNA interactions for Protein: P09619

PDGFRB, Platelet-derived growth factor receptor beta, humanhuman

Predictions only

Length 1,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRBP09619 RNU6-661P-201ENST00000362409 107 ntBASIC2.36□□□□□ -2.03
PDGFRBP09619 Y_RNA.124-201ENST00000363339 93 ntBASIC2.36□□□□□ -2.03
PDGFRBP09619 Y_RNA.210-201ENST00000364161 110 ntBASIC2.36□□□□□ -2.03
PDGFRBP09619 SNORA70B-201ENST00000384210 135 ntBASIC2.36□□□□□ -2.03
PDGFRBP09619 MIR676-201ENST00000390702 67 ntBASIC2.36□□□□□ -2.03
PDGFRBP09619 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.36□□□□□ -2.03
PDGFRBP09619 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.36□□□□□ -2.03
PDGFRBP09619 AL356320.1-201ENST00000429616 163 ntBASIC2.36□□□□□ -2.03
PDGFRBP09619 RNU1-41P-201ENST00000516161 162 ntBASIC2.36□□□□□ -2.03
PDGFRBP09619 RNU1-48P-201ENST00000516400 162 ntBASIC2.36□□□□□ -2.03
PDGFRBP09619 RNU7-128P-201ENST00000517247 62 ntBASIC2.36□□□□□ -2.03
PDGFRBP09619 MIR4300-201ENST00000581016 96 ntBASIC2.36□□□□□ -2.03
PDGFRBP09619 MIR3124-201ENST00000582636 67 ntBASIC2.36□□□□□ -2.03
PDGFRBP09619 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PDGFRBP09619 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.35□□□□□ -2.03
PDGFRBP09619 ZNF720P1-201ENST00000562403 1939 ntBASIC2.35□□□□□ -2.03
PDGFRBP09619 SNORD113-8-201ENST00000363497 74 ntBASIC2.35□□□□□ -2.03
PDGFRBP09619 RNU6-414P-201ENST00000363705 104 ntBASIC2.35□□□□□ -2.03
PDGFRBP09619 RNU6-1160P-201ENST00000384546 104 ntBASIC2.35□□□□□ -2.03
PDGFRBP09619 RNU4-30P-201ENST00000410245 143 ntBASIC2.35□□□□□ -2.03
PDGFRBP09619 POLR2KP2-201ENST00000438155 177 ntBASIC2.35□□□□□ -2.03
PDGFRBP09619 RPL23AP42-201ENST00000471152 471 ntBASIC2.35□□□□□ -2.03
PDGFRBP09619 HMGB3P17-201ENST00000504195 649 ntBASIC2.35□□□□□ -2.03
PDGFRBP09619 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.35□□□□□ -2.03
PDGFRBP09619 RNY3P15-201ENST00000516297 97 ntBASIC2.35□□□□□ -2.03
PDGFRBP09619 RNA5SP437-201ENST00000517249 129 ntBASIC2.35□□□□□ -2.03
PDGFRBP09619 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.35□□□□□ -2.03
PDGFRBP09619 AC136932.1-201ENST00000574771 208 ntBASIC2.35□□□□□ -2.03
PDGFRBP09619 AC104984.5-201ENST00000586878 94 ntBASIC2.35□□□□□ -2.03
PDGFRBP09619 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.03
PDGFRBP09619 RNU6-770P-201ENST00000363929 105 ntBASIC2.34□□□□□ -2.03
PDGFRBP09619 Y_RNA.329-201ENST00000365209 107 ntBASIC2.34□□□□□ -2.03
PDGFRBP09619 SNORA67.3-201ENST00000384366 140 ntBASIC2.34□□□□□ -2.03
PDGFRBP09619 MIR520G-201ENST00000385064 90 ntBASIC2.34□□□□□ -2.03
PDGFRBP09619 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PDGFRBP09619 SNORD115-46-201ENST00000390982 71 ntBASIC2.34□□□□□ -2.03
PDGFRBP09619 RNU6-1248P-201ENST00000391096 64 ntBASIC2.34□□□□□ -2.03
PDGFRBP09619 RNU2-61P-201ENST00000411069 191 ntBASIC2.34□□□□□ -2.03
PDGFRBP09619 AC245047.3-201ENST00000429428 127 ntBASIC2.34□□□□□ -2.03
PDGFRBP09619 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PDGFRBP09619 snoU13.27-201ENST00000459278 104 ntBASIC2.34□□□□□ -2.03
PDGFRBP09619 AC025465.3-201ENST00000510570 311 ntBASIC2.34□□□□□ -2.03
PDGFRBP09619 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.34□□□□□ -2.03
PDGFRBP09619 RNU6-1137P-201ENST00000517073 99 ntBASIC2.34□□□□□ -2.03
PDGFRBP09619 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.34□□□□□ -2.03
PDGFRBP09619 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.34□□□□□ -2.03
PDGFRBP09619 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.34□□□□□ -2.03
PDGFRBP09619 MIR1273D-201ENST00000577266 86 ntBASIC2.34□□□□□ -2.03
PDGFRBP09619 MIR6079-201ENST00000635807 62 ntBASIC2.34□□□□□ -2.03
PDGFRBP09619 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
PDGFRBP09619 RNU4-90P-201ENST00000362773 141 ntBASIC2.33□□□□□ -2.04
PDGFRBP09619 RNA5SP109-201ENST00000391010 116 ntBASIC2.33□□□□□ -2.04
PDGFRBP09619 RN7SKP200-201ENST00000410564 320 ntBASIC2.33□□□□□ -2.04
PDGFRBP09619 MRPS35P2-201ENST00000508242 191 ntBASIC2.33□□□□□ -2.04
PDGFRBP09619 RNU6-1337P-201ENST00000516525 95 ntBASIC2.33□□□□□ -2.04
PDGFRBP09619 MIR4709-201ENST00000577272 72 ntBASIC2.33□□□□□ -2.04
PDGFRBP09619 AC009831.4-201ENST00000620744 325 ntBASIC2.33□□□□□ -2.04
PDGFRBP09619 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PDGFRBP09619 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PDGFRBP09619 AL356292.1-201ENST00000283110 373 ntBASIC2.32□□□□□ -2.04
PDGFRBP09619 SNORA64-201ENST00000384674 134 ntBASIC2.32□□□□□ -2.04
PDGFRBP09619 MIR606-201ENST00000384851 96 ntBASIC2.32□□□□□ -2.04
PDGFRBP09619 AL023284.1-201ENST00000403956 276 ntBASIC2.32□□□□□ -2.04
PDGFRBP09619 Y_RNA.602-201ENST00000410535 92 ntBASIC2.32□□□□□ -2.04
PDGFRBP09619 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.32□□□□□ -2.04
PDGFRBP09619 MIR4448-201ENST00000584360 86 ntBASIC2.32□□□□□ -2.04
PDGFRBP09619 AL359851.1-201ENST00000569460 4997 ntBASIC2.31□□□□□ -2.04
PDGFRBP09619 Y_RNA.19-201ENST00000362462 99 ntBASIC2.31□□□□□ -2.04
PDGFRBP09619 Y_RNA.153-201ENST00000363615 91 ntBASIC2.31□□□□□ -2.04
PDGFRBP09619 RNU4-13P-201ENST00000364019 141 ntBASIC2.31□□□□□ -2.04
PDGFRBP09619 RNU6-117P-201ENST00000365415 107 ntBASIC2.31□□□□□ -2.04
PDGFRBP09619 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.31□□□□□ -2.04
PDGFRBP09619 Y_RNA.383-201ENST00000383855 97 ntBASIC2.31□□□□□ -2.04
PDGFRBP09619 RPL21P1-201ENST00000399532 476 ntBASIC2.31□□□□□ -2.04
PDGFRBP09619 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.31□□□□□ -2.04
PDGFRBP09619 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.31□□□□□ -2.04
PDGFRBP09619 Y_RNA.720-201ENST00000517166 92 ntBASIC2.31□□□□□ -2.04
PDGFRBP09619 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.31□□□□□ -2.04
PDGFRBP09619 MIR4648-201ENST00000580107 72 ntBASIC2.31□□□□□ -2.04
PDGFRBP09619 AL162424.1-201ENST00000602325 221 ntBASIC2.31□□□□□ -2.04
PDGFRBP09619 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.31□□□□□ -2.04
PDGFRBP09619 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PDGFRBP09619 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
PDGFRBP09619 MIRLET7G-201ENST00000362280 84 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 Y_RNA.214-201ENST00000364201 112 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 RNU4-52P-201ENST00000384209 138 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 RNA5SP489-201ENST00000410986 109 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 RN7SKP192-201ENST00000411291 327 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 ELOCP20-201ENST00000422460 345 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 AL731563.1-201ENST00000442202 214 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 MTND4LP30-201ENST00000454092 297 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 RNU7-34P-201ENST00000459394 64 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 AC010655.3-201ENST00000478818 450 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 RNA5SP200-201ENST00000516360 103 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 RNU6-966P-201ENST00000516479 104 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 RNU6-341P-201ENST00000516973 96 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.3□□□□□ -2.04
PDGFRBP09619 AC022217.4-201ENST00000604389 163 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 AC037487.3-201ENST00000606668 112 ntBASIC2.3□□□□□ -2.04
PDGFRBP09619 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms