Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNU5F-3P-201ENST00000363767 117 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 RNU4-28P-201ENST00000364739 141 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 RNU6-541P-201ENST00000384709 110 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 MIR526A1-201ENST00000384897 85 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 CALM2P3-201ENST00000400429 449 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.03□□□□□ -2.4
COL1A1P02452 PDCL2P1-201ENST00000419302 352 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.03□□□□□ -2.4
COL1A1P02452 MTND4P18-201ENST00000447010 465 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 MRPS10P1-201ENST00000448483 130 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 SNORD42A-201ENST00000459584 64 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 AC091021.1-201ENST00000468051 388 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 AC093534.1-201ENST00000504977 132 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 MIR4645-201ENST00000583158 77 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 MIR548AB-201ENST00000584917 84 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 AC008536.2-201ENST00000607284 349 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 AC006504.8-201ENST00000621046 635 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 SNORD44.1-201ENST00000363202 61 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 RNU6-280P-201ENST00000364145 104 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 RNU6-302P-201ENST00000365249 107 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 RNU6-815P-201ENST00000384080 113 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 MIR521-1-201ENST00000384902 87 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 MIR1827-201ENST00000408549 66 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 RNU2-9P-201ENST00000410194 145 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 AL356010.1-201ENST00000456364 102 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 ELOCP24-201ENST00000456370 334 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 AC107401.1-201ENST00000503426 685 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 AC097462.1-201ENST00000514125 324 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 SNORA25.12-201ENST00000516202 82 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 AL358944.1-201ENST00000528537 144 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 AK6P2-201ENST00000549020 471 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 AL157687.1-201ENST00000554853 619 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 EIF1P4-201ENST00000572664 335 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 CPDP1-201ENST00000579660 283 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 RNU6-94P-201ENST00000607728 107 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 HULC.1-201ENST00000612720 240 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 uc_338.34-201ENST00000617467 174 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 AC015726.2-201ENST00000620112 122 ntBASIC0.03□□□□□ -2.41
COL1A1P02452 FER-210ENST00000628534 558 ntTSL 5 BASIC0.03□□□□□ -2.41
COL1A1P02452 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
COL1A1P02452 RNU6-82P-201ENST00000363970 107 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 RNU6-282P-201ENST00000365357 103 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 RNU6-214P-201ENST00000384130 107 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 RNU6-933P-201ENST00000384424 107 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 Y_RNA.560-201ENST00000384689 102 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 MIR487A-201ENST00000385009 80 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 AL590002.1-201ENST00000406554 418 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 ZNF885P-201ENST00000420174 1098 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 AC133104.1-201ENST00000429100 218 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 AL353572.1-201ENST00000442490 417 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 MTCO3P38-201ENST00000468910 766 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 AC005178.1-201ENST00000508392 440 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 SNORA74.3-201ENST00000517108 154 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 RNU6-1116P-201ENST00000517269 99 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.02□□□□□ -2.41
COL1A1P02452 Y_RNA.757-201ENST00000578934 114 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 AC100812.1-201ENST00000607622 580 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 AC010999.1-201ENST00000611856 324 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 MIR4315-1-201ENST00000636800 73 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 MIR4315-2-201ENST00000640925 73 ntBASIC0.02□□□□□ -2.41
COL1A1P02452 RNU6-727P-201ENST00000363592 107 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 Y_RNA.179-201ENST00000363844 90 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 Y_RNA.184-201ENST00000363884 108 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 MIR136-201ENST00000385207 82 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 MIR450B-201ENST00000401182 78 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 MTCYBP4-201ENST00000401524 249 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 MIR1298-201ENST00000408783 112 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 MTND4P32-201ENST00000437189 1237 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 SNORD57-201ENST00000448188 72 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 HMGN2P26-201ENST00000463169 339 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 MTATP6P9-201ENST00000515039 680 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 SNORA18.6-201ENST00000516792 115 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 SCARNA16.5-201ENST00000517114 183 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 AC104576.1-201ENST00000524225 88 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.01□□□□□ -2.41
COL1A1P02452 AC022523.2-201ENST00000561045 150 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.01□□□□□ -2.41
COL1A1P02452 MIR4764-201ENST00000580680 88 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 AC087683.1-201ENST00000591187 441 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 LARP7P1-201ENST00000605576 316 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 AC092634.7-201ENST00000621022 103 ntBASIC0.01□□□□□ -2.41
COL1A1P02452 SNORD114-5-201ENST00000362928 70 ntBASIC0□□□□□ -2.41
COL1A1P02452 Y_RNA.415-201ENST00000384012 112 ntBASIC0□□□□□ -2.41
COL1A1P02452 RNU6V-201ENST00000384105 107 ntBASIC0□□□□□ -2.41
COL1A1P02452 RNU6-1297P-201ENST00000384415 104 ntBASIC0□□□□□ -2.41
COL1A1P02452 RNU6-1184P-201ENST00000384588 108 ntBASIC0□□□□□ -2.41
COL1A1P02452 RNU6-376P-201ENST00000384731 106 ntBASIC0□□□□□ -2.41
COL1A1P02452 MIR452-201ENST00000385020 85 ntBASIC0□□□□□ -2.41
COL1A1P02452 MIR518A1-201ENST00000385068 85 ntBASIC0□□□□□ -2.41
COL1A1P02452 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0□□□□□ -2.41
COL1A1P02452 AL606923.1-201ENST00000406616 190 ntBASIC0□□□□□ -2.41
COL1A1P02452 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0□□□□□ -2.41
COL1A1P02452 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0□□□□□ -2.41
COL1A1P02452 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0□□□□□ -2.41
COL1A1P02452 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0□□□□□ -2.41
COL1A1P02452 AC015818.7-201ENST00000428754 109 ntBASIC0□□□□□ -2.41
COL1A1P02452 AL353997.1-201ENST00000432936 108 ntBASIC0□□□□□ -2.41
COL1A1P02452 AC087499.7-201ENST00000441958 109 ntBASIC0□□□□□ -2.41
COL1A1P02452 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0□□□□□ -2.41
COL1A1P02452 TPTE2P5-203ENST00000458118 728 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms