Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.51□□□□□ -2.17
GGPS1O95749 MIR7974-201ENST00000615835 79 ntBASIC1.51□□□□□ -2.17
GGPS1O95749 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.51□□□□□ -2.17
GGPS1O95749 MIR3674-201ENST00000636576 68 ntBASIC1.51□□□□□ -2.17
GGPS1O95749 SNORA27.1-201ENST00000362604 124 ntBASIC1.5□□□□□ -2.17
GGPS1O95749 SNORA12.1-201ENST00000390873 148 ntBASIC1.5□□□□□ -2.17
GGPS1O95749 SNORA69.1-201ENST00000390904 137 ntBASIC1.5□□□□□ -2.17
GGPS1O95749 AL034345.1-201ENST00000407768 123 ntBASIC1.5□□□□□ -2.17
GGPS1O95749 RNU6-1156P-201ENST00000410365 100 ntBASIC1.5□□□□□ -2.17
GGPS1O95749 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.5□□□□□ -2.17
GGPS1O95749 AC018865.2-201ENST00000423631 129 ntBASIC1.5□□□□□ -2.17
GGPS1O95749 MTND4P28-201ENST00000426217 387 ntBASIC1.5□□□□□ -2.17
GGPS1O95749 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.5□□□□□ -2.17
GGPS1O95749 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.5□□□□□ -2.17
GGPS1O95749 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.5□□□□□ -2.17
GGPS1O95749 AC004223.1-201ENST00000479840 271 ntBASIC1.5□□□□□ -2.17
GGPS1O95749 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.5□□□□□ -2.17
GGPS1O95749 Y_RNA.673-201ENST00000516306 88 ntBASIC1.5□□□□□ -2.17
GGPS1O95749 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
GGPS1O95749 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
GGPS1O95749 AC005828.6-201ENST00000606610 232 ntBASIC1.5□□□□□ -2.17
GGPS1O95749 AC025253.1-201ENST00000613623 543 ntBASIC1.5□□□□□ -2.17
GGPS1O95749 MIR6079-201ENST00000635807 62 ntBASIC1.5□□□□□ -2.17
GGPS1O95749 U6.115-201ENST00000636045 103 ntBASIC1.5□□□□□ -2.17
GGPS1O95749 RNU6-53P-201ENST00000365367 106 ntBASIC1.49□□□□□ -2.17
GGPS1O95749 RNA5SP259-201ENST00000365541 109 ntBASIC1.49□□□□□ -2.17
GGPS1O95749 Y_RNA.592-201ENST00000410274 109 ntBASIC1.49□□□□□ -2.17
GGPS1O95749 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
GGPS1O95749 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.49□□□□□ -2.17
GGPS1O95749 PGBD4P5-201ENST00000445958 426 ntBASIC1.49□□□□□ -2.17
GGPS1O95749 Y_RNA.653-201ENST00000459091 95 ntBASIC1.49□□□□□ -2.17
GGPS1O95749 RNA5SP20-201ENST00000515976 84 ntBASIC1.49□□□□□ -2.17
GGPS1O95749 AL162424.1-201ENST00000602325 221 ntBASIC1.49□□□□□ -2.17
GGPS1O95749 AL365434.2-201ENST00000607979 234 ntBASIC1.49□□□□□ -2.17
GGPS1O95749 AL078604.3-201ENST00000615580 211 ntBASIC1.49□□□□□ -2.17
GGPS1O95749 AL161722.3-201ENST00000605789 2983 ntBASIC1.49□□□□□ -2.17
GGPS1O95749 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
GGPS1O95749 RNU6-454P-201ENST00000364292 107 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 SNORA25.9-201ENST00000365087 128 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 RNU6-407P-201ENST00000365280 104 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 RNU6-1297P-201ENST00000384415 104 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 RNA5SP475-201ENST00000410568 110 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 RNU6-1304P-201ENST00000411374 106 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.48□□□□□ -2.17
GGPS1O95749 SNX2P2-201ENST00000424553 323 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 AL135790.2-201ENST00000437701 267 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 SUMO1P2-201ENST00000452524 304 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 RNU7-4P-201ENST00000516961 62 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 RPL21P9-201ENST00000556149 474 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 MIR3660-201ENST00000584845 100 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 MIR6078-201ENST00000611069 100 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 AC133104.2-201ENST00000615272 193 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 AL513423.1-201ENST00000621695 132 ntBASIC1.48□□□□□ -2.17
GGPS1O95749 RNU6-1310P-201ENST00000384153 107 ntBASIC1.47□□□□□ -2.17
GGPS1O95749 MIR499A-201ENST00000384903 122 ntBASIC1.47□□□□□ -2.17
GGPS1O95749 SNORA40.6-201ENST00000391153 128 ntBASIC1.47□□□□□ -2.17
GGPS1O95749 MIR873-201ENST00000401120 77 ntBASIC1.47□□□□□ -2.17
GGPS1O95749 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.47□□□□□ -2.17
GGPS1O95749 MTCO3P10-201ENST00000455912 772 ntBASIC1.47□□□□□ -2.17
GGPS1O95749 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
GGPS1O95749 HMGN1P7-201ENST00000491722 313 ntBASIC1.47□□□□□ -2.17
GGPS1O95749 RNU6-470P-201ENST00000515954 104 ntBASIC1.47□□□□□ -2.17
GGPS1O95749 AL021879.1-201ENST00000611756 288 ntBASIC1.47□□□□□ -2.17
GGPS1O95749 AC091895.1-201ENST00000624494 256 ntBASIC1.47□□□□□ -2.17
GGPS1O95749 Y_RNA.142-201ENST00000363491 102 ntBASIC1.46□□□□□ -2.18
GGPS1O95749 SNORD26-201ENST00000384147 75 ntBASIC1.46□□□□□ -2.18
GGPS1O95749 MIR562-201ENST00000384894 95 ntBASIC1.46□□□□□ -2.18
GGPS1O95749 MIR758-201ENST00000390227 88 ntBASIC1.46□□□□□ -2.18
GGPS1O95749 AL137792.2-201ENST00000443484 235 ntBASIC1.46□□□□□ -2.18
GGPS1O95749 RPL30P15-201ENST00000457129 321 ntBASIC1.46□□□□□ -2.18
GGPS1O95749 AC105758.1-201ENST00000506038 399 ntBASIC1.46□□□□□ -2.18
GGPS1O95749 RNU6-277P-201ENST00000516272 106 ntBASIC1.46□□□□□ -2.18
GGPS1O95749 SUMO2P16-201ENST00000519475 264 ntBASIC1.46□□□□□ -2.18
GGPS1O95749 AC144568.1-201ENST00000520139 137 ntBASIC1.46□□□□□ -2.18
GGPS1O95749 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.46□□□□□ -2.18
GGPS1O95749 UBE2V2P2-201ENST00000587677 504 ntBASIC1.46□□□□□ -2.18
GGPS1O95749 PRR13P7-201ENST00000605538 430 ntBASIC1.46□□□□□ -2.18
GGPS1O95749 SNORA28-201ENST00000606769 126 ntBASIC1.46□□□□□ -2.18
GGPS1O95749 AC073349.3-201ENST00000617616 186 ntBASIC1.46□□□□□ -2.18
GGPS1O95749 SNORD114-7-201ENST00000362520 77 ntBASIC1.45□□□□□ -2.18
GGPS1O95749 Y_RNA.387-201ENST00000383918 102 ntBASIC1.45□□□□□ -2.18
GGPS1O95749 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.45□□□□□ -2.18
GGPS1O95749 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
GGPS1O95749 STAG3L5P-204ENST00000443759 179 ntBASIC1.45□□□□□ -2.18
GGPS1O95749 ELOCP24-201ENST00000456370 334 ntBASIC1.45□□□□□ -2.18
GGPS1O95749 AC091021.1-201ENST00000468051 388 ntBASIC1.45□□□□□ -2.18
GGPS1O95749 RPL30P7-201ENST00000479312 323 ntBASIC1.45□□□□□ -2.18
GGPS1O95749 RNU6-1278P-201ENST00000516130 107 ntBASIC1.45□□□□□ -2.18
GGPS1O95749 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.45□□□□□ -2.18
GGPS1O95749 AL512310.8-201ENST00000550183 120 ntBASIC1.45□□□□□ -2.18
GGPS1O95749 AC091178.2-201ENST00000584401 117 ntBASIC1.45□□□□□ -2.18
GGPS1O95749 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.45□□□□□ -2.18
GGPS1O95749 Y_RNA.243-201ENST00000364481 109 ntBASIC1.44□□□□□ -2.18
GGPS1O95749 RNY3P4-201ENST00000384428 101 ntBASIC1.44□□□□□ -2.18
GGPS1O95749 RNU6-376P-201ENST00000384731 106 ntBASIC1.44□□□□□ -2.18
GGPS1O95749 MIR660-201ENST00000385235 97 ntBASIC1.44□□□□□ -2.18
GGPS1O95749 MIR1276-201ENST00000408707 83 ntBASIC1.44□□□□□ -2.18
GGPS1O95749 RPL30P13-201ENST00000418873 348 ntBASIC1.44□□□□□ -2.18
GGPS1O95749 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.44□□□□□ -2.18
GGPS1O95749 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms