Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC022217.4-201ENST00000604389 163 ntBASIC1.8□□□□□ -2.12
RTN3O95197 AC005828.6-201ENST00000606610 232 ntBASIC1.8□□□□□ -2.12
RTN3O95197 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.8□□□□□ -2.12
RTN3O95197 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RTN3O95197 Y_RNA.39-201ENST00000362620 98 ntBASIC1.79□□□□□ -2.12
RTN3O95197 RNU1-22P-201ENST00000363334 158 ntBASIC1.79□□□□□ -2.12
RTN3O95197 RNU6-961P-201ENST00000363893 105 ntBASIC1.79□□□□□ -2.12
RTN3O95197 RNU1-115P-201ENST00000365329 160 ntBASIC1.79□□□□□ -2.12
RTN3O95197 Y_RNA.355-201ENST00000365462 98 ntBASIC1.79□□□□□ -2.12
RTN3O95197 RNU6-338P-201ENST00000383888 105 ntBASIC1.79□□□□□ -2.12
RTN3O95197 AC018865.2-201ENST00000423631 129 ntBASIC1.79□□□□□ -2.12
RTN3O95197 AC010154.1-201ENST00000425857 269 ntBASIC1.79□□□□□ -2.12
RTN3O95197 AC245047.3-201ENST00000429428 127 ntBASIC1.79□□□□□ -2.12
RTN3O95197 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.79□□□□□ -2.12
RTN3O95197 RNA5SP445-201ENST00000515889 115 ntBASIC1.79□□□□□ -2.12
RTN3O95197 RNA5SP20-201ENST00000515976 84 ntBASIC1.79□□□□□ -2.12
RTN3O95197 AC023442.1-201ENST00000531247 422 ntBASIC1.79□□□□□ -2.12
RTN3O95197 CBX3P4-201ENST00000538909 354 ntBASIC1.79□□□□□ -2.12
RTN3O95197 AL133255.1-201ENST00000606374 441 ntBASIC1.79□□□□□ -2.12
RTN3O95197 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RTN3O95197 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.78□□□□□ -2.12
RTN3O95197 AC018630.2-201ENST00000534866 2403 ntBASIC1.78□□□□□ -2.12
RTN3O95197 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RTN3O95197 RNA5SP363-201ENST00000365072 115 ntBASIC1.78□□□□□ -2.12
RTN3O95197 Y_RNA.431-201ENST00000384086 102 ntBASIC1.78□□□□□ -2.12
RTN3O95197 Y_RNA.496-201ENST00000384444 101 ntBASIC1.78□□□□□ -2.12
RTN3O95197 Y_RNA.579-201ENST00000390939 94 ntBASIC1.78□□□□□ -2.12
RTN3O95197 MIR873-201ENST00000401120 77 ntBASIC1.78□□□□□ -2.12
RTN3O95197 MRPL42P3-201ENST00000401492 326 ntBASIC1.78□□□□□ -2.12
RTN3O95197 RN7SKP200-201ENST00000410564 320 ntBASIC1.78□□□□□ -2.12
RTN3O95197 CHEK2P4-201ENST00000450340 246 ntBASIC1.78□□□□□ -2.12
RTN3O95197 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.78□□□□□ -2.12
RTN3O95197 RPL21P9-201ENST00000556149 474 ntBASIC1.78□□□□□ -2.12
RTN3O95197 MIR4659A-201ENST00000580269 81 ntBASIC1.78□□□□□ -2.12
RTN3O95197 AC092447.9-201ENST00000603395 144 ntBASIC1.78□□□□□ -2.12
RTN3O95197 AC073413.2-201ENST00000604332 360 ntBASIC1.78□□□□□ -2.12
RTN3O95197 AC004467.1-201ENST00000615678 330 ntBASIC1.78□□□□□ -2.12
RTN3O95197 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RTN3O95197 MIR378A-201ENST00000362177 66 ntBASIC1.77□□□□□ -2.13
RTN3O95197 Y_RNA.5-201ENST00000362334 102 ntBASIC1.77□□□□□ -2.13
RTN3O95197 SNORD114-7-201ENST00000362520 77 ntBASIC1.77□□□□□ -2.13
RTN3O95197 Y_RNA.243-201ENST00000364481 109 ntBASIC1.77□□□□□ -2.13
RTN3O95197 SNORD48-201ENST00000364953 64 ntBASIC1.77□□□□□ -2.13
RTN3O95197 AL161935.2-201ENST00000414627 60 ntBASIC1.77□□□□□ -2.13
RTN3O95197 SDAD1P3-201ENST00000427380 333 ntBASIC1.77□□□□□ -2.13
RTN3O95197 HSPE1P24-201ENST00000450782 238 ntBASIC1.77□□□□□ -2.13
RTN3O95197 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.77□□□□□ -2.13
RTN3O95197 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
RTN3O95197 AL929325.1-201ENST00000603096 117 ntBASIC1.77□□□□□ -2.13
RTN3O95197 AC104985.2-201ENST00000620598 500 ntBASIC1.77□□□□□ -2.13
RTN3O95197 MIR8054-201ENST00000620877 86 ntBASIC1.77□□□□□ -2.13
RTN3O95197 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.77□□□□□ -2.13
RTN3O95197 AC095038.3-201ENST00000634439 195 ntBASIC1.77□□□□□ -2.13
RTN3O95197 U6.92-201ENST00000636464 89 ntBASIC1.77□□□□□ -2.13
RTN3O95197 ICE2P2-201ENST00000483823 2787 ntBASIC1.77□□□□□ -2.13
RTN3O95197 MIR337-201ENST00000362281 93 ntBASIC1.76□□□□□ -2.13
RTN3O95197 Y_RNA.197-201ENST00000364004 102 ntBASIC1.76□□□□□ -2.13
RTN3O95197 RNU6-203P-201ENST00000384038 104 ntBASIC1.76□□□□□ -2.13
RTN3O95197 RNU6-321P-201ENST00000410912 106 ntBASIC1.76□□□□□ -2.13
RTN3O95197 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
RTN3O95197 AC245517.4-201ENST00000448601 281 ntBASIC1.76□□□□□ -2.13
RTN3O95197 SNORD13-201ENST00000459299 104 ntBASIC1.76□□□□□ -2.13
RTN3O95197 RNU6-1170P-201ENST00000515974 106 ntBASIC1.76□□□□□ -2.13
RTN3O95197 RNU6-1278P-201ENST00000516130 107 ntBASIC1.76□□□□□ -2.13
RTN3O95197 RNU6-970P-201ENST00000516312 107 ntBASIC1.76□□□□□ -2.13
RTN3O95197 RNU2-12P-201ENST00000517216 168 ntBASIC1.76□□□□□ -2.13
RTN3O95197 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.76□□□□□ -2.13
RTN3O95197 MIR4422-201ENST00000581938 83 ntBASIC1.76□□□□□ -2.13
RTN3O95197 AC005176.2-201ENST00000596933 147 ntBASIC1.76□□□□□ -2.13
RTN3O95197 AC006380.1-201ENST00000603598 186 ntBASIC1.76□□□□□ -2.13
RTN3O95197 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.76□□□□□ -2.13
RTN3O95197 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
RTN3O95197 RNU5E-4P-201ENST00000364931 120 ntBASIC1.75□□□□□ -2.13
RTN3O95197 RNU6-867P-201ENST00000364956 107 ntBASIC1.75□□□□□ -2.13
RTN3O95197 RNU6-708P-201ENST00000384217 107 ntBASIC1.75□□□□□ -2.13
RTN3O95197 MIR194-1-201ENST00000384892 85 ntBASIC1.75□□□□□ -2.13
RTN3O95197 SNORA67.5-201ENST00000391036 107 ntBASIC1.75□□□□□ -2.13
RTN3O95197 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.75□□□□□ -2.13
RTN3O95197 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.75□□□□□ -2.13
RTN3O95197 AL137792.2-201ENST00000443484 235 ntBASIC1.75□□□□□ -2.13
RTN3O95197 RPS26P55-201ENST00000471178 356 ntBASIC1.75□□□□□ -2.13
RTN3O95197 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.75□□□□□ -2.13
RTN3O95197 SNORA31.10-201ENST00000516482 106 ntBASIC1.75□□□□□ -2.13
RTN3O95197 AC011476.5-201ENST00000615594 130 ntBASIC1.75□□□□□ -2.13
RTN3O95197 AC240442.1-201ENST00000616055 283 ntBASIC1.75□□□□□ -2.13
RTN3O95197 MIR8070-201ENST00000616510 88 ntBASIC1.75□□□□□ -2.13
RTN3O95197 MIR8063-201ENST00000621930 81 ntBASIC1.75□□□□□ -2.13
RTN3O95197 AL606534.2-204ENST00000635008 178 ntBASIC1.75□□□□□ -2.13
RTN3O95197 MIR6079-201ENST00000635807 62 ntBASIC1.75□□□□□ -2.13
RTN3O95197 WWP1P1-201ENST00000466609 2769 ntBASIC1.75□□□□□ -2.13
RTN3O95197 RNU6-20P-201ENST00000384106 107 ntBASIC1.74□□□□□ -2.13
RTN3O95197 RNU6-376P-201ENST00000384731 106 ntBASIC1.74□□□□□ -2.13
RTN3O95197 RNU6-1031P-201ENST00000384773 107 ntBASIC1.74□□□□□ -2.13
RTN3O95197 MIR562-201ENST00000384894 95 ntBASIC1.74□□□□□ -2.13
RTN3O95197 MIR499A-201ENST00000384903 122 ntBASIC1.74□□□□□ -2.13
RTN3O95197 RNU6-440P-201ENST00000390882 105 ntBASIC1.74□□□□□ -2.13
RTN3O95197 SNORA70.12-201ENST00000516084 153 ntBASIC1.74□□□□□ -2.13
RTN3O95197 SNORA40.14-201ENST00000516543 86 ntBASIC1.74□□□□□ -2.13
RTN3O95197 RNU4-77P-201ENST00000516692 156 ntBASIC1.74□□□□□ -2.13
RTN3O95197 AC055872.1-201ENST00000570978 278 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms