Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
BEST1O76090 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.57□□□□□ -2.16
BEST1O76090 Y_RNA.263-201ENST00000364659 114 ntBASIC1.57□□□□□ -2.16
BEST1O76090 Y_RNA.314-201ENST00000365114 102 ntBASIC1.57□□□□□ -2.16
BEST1O76090 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.57□□□□□ -2.16
BEST1O76090 RNU6-1040P-201ENST00000383974 107 ntBASIC1.57□□□□□ -2.16
BEST1O76090 SNORD116-29-201ENST00000384516 83 ntBASIC1.57□□□□□ -2.16
BEST1O76090 MIR517C-201ENST00000385103 95 ntBASIC1.57□□□□□ -2.16
BEST1O76090 MIR559-201ENST00000385188 96 ntBASIC1.57□□□□□ -2.16
BEST1O76090 SNORA67.6-201ENST00000391093 99 ntBASIC1.57□□□□□ -2.16
BEST1O76090 FCF1P4-201ENST00000448326 183 ntBASIC1.57□□□□□ -2.16
BEST1O76090 MTND5P20-201ENST00000448677 143 ntBASIC1.57□□□□□ -2.16
BEST1O76090 RNU6-1278P-201ENST00000516130 107 ntBASIC1.57□□□□□ -2.16
BEST1O76090 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.57□□□□□ -2.16
BEST1O76090 MIR548S-201ENST00000581352 82 ntBASIC1.57□□□□□ -2.16
BEST1O76090 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
BEST1O76090 Y_RNA.187-201ENST00000363918 113 ntBASIC1.56□□□□□ -2.16
BEST1O76090 AP1B1P2-201ENST00000416196 106 ntBASIC1.56□□□□□ -2.16
BEST1O76090 SNX2P2-201ENST00000424553 323 ntBASIC1.56□□□□□ -2.16
BEST1O76090 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
BEST1O76090 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.56□□□□□ -2.16
BEST1O76090 AL137792.2-201ENST00000443484 235 ntBASIC1.56□□□□□ -2.16
BEST1O76090 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.56□□□□□ -2.16
BEST1O76090 AL355375.2-201ENST00000574825 175 ntBASIC1.56□□□□□ -2.16
BEST1O76090 U2.1-201ENST00000618978 145 ntBASIC1.56□□□□□ -2.16
BEST1O76090 AL513423.1-201ENST00000621695 132 ntBASIC1.56□□□□□ -2.16
BEST1O76090 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
BEST1O76090 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.56□□□□□ -2.16
BEST1O76090 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
BEST1O76090 RNA5SP259-201ENST00000365541 109 ntBASIC1.55□□□□□ -2.16
BEST1O76090 RNU6-376P-201ENST00000384731 106 ntBASIC1.55□□□□□ -2.16
BEST1O76090 MIR628-201ENST00000385229 95 ntBASIC1.55□□□□□ -2.16
BEST1O76090 SNORD78.2-201ENST00000391076 69 ntBASIC1.55□□□□□ -2.16
BEST1O76090 MRPS18CP6-201ENST00000423587 223 ntBASIC1.55□□□□□ -2.16
BEST1O76090 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.55□□□□□ -2.16
BEST1O76090 RNU7-95P-201ENST00000459222 64 ntBASIC1.55□□□□□ -2.16
BEST1O76090 RNU7-169P-201ENST00000459456 61 ntBASIC1.55□□□□□ -2.16
BEST1O76090 RNU7-28P-201ENST00000516759 62 ntBASIC1.55□□□□□ -2.16
BEST1O76090 RNU6-341P-201ENST00000516973 96 ntBASIC1.55□□□□□ -2.16
BEST1O76090 AP001485.1-201ENST00000604799 199 ntBASIC1.55□□□□□ -2.16
BEST1O76090 AL021879.1-201ENST00000611756 288 ntBASIC1.55□□□□□ -2.16
BEST1O76090 AC084781.2-201ENST00000615568 161 ntBASIC1.55□□□□□ -2.16
BEST1O76090 AC004467.1-201ENST00000615678 330 ntBASIC1.55□□□□□ -2.16
BEST1O76090 AC073349.3-201ENST00000617616 186 ntBASIC1.55□□□□□ -2.16
BEST1O76090 AC127459.3-201ENST00000624328 466 ntBASIC1.55□□□□□ -2.16
BEST1O76090 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
BEST1O76090 Y_RNA.428-201ENST00000384078 102 ntBASIC1.54□□□□□ -2.16
BEST1O76090 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
BEST1O76090 RPS27P16-201ENST00000425758 201 ntBASIC1.54□□□□□ -2.16
BEST1O76090 AC236972.2-201ENST00000434979 310 ntBASIC1.54□□□□□ -2.16
BEST1O76090 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.54□□□□□ -2.16
BEST1O76090 RNU7-152P-201ENST00000458982 64 ntBASIC1.54□□□□□ -2.16
BEST1O76090 Y_RNA.632-201ENST00000459189 102 ntBASIC1.54□□□□□ -2.16
BEST1O76090 Y_RNA.702-201ENST00000516843 96 ntBASIC1.54□□□□□ -2.16
BEST1O76090 RNU6-699P-201ENST00000517081 110 ntBASIC1.54□□□□□ -2.16
BEST1O76090 SNORA31.24-201ENST00000517232 57 ntBASIC1.54□□□□□ -2.16
BEST1O76090 AC019176.1-201ENST00000518519 225 ntBASIC1.54□□□□□ -2.16
BEST1O76090 DNAJC19P9-201ENST00000555084 351 ntBASIC1.54□□□□□ -2.16
BEST1O76090 AC006380.1-201ENST00000603598 186 ntBASIC1.54□□□□□ -2.16
BEST1O76090 MIR378A-201ENST00000362177 66 ntBASIC1.53□□□□□ -2.16
BEST1O76090 RNU6-961P-201ENST00000363893 105 ntBASIC1.53□□□□□ -2.16
BEST1O76090 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.53□□□□□ -2.16
BEST1O76090 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.53□□□□□ -2.16
BEST1O76090 SNORA70.12-201ENST00000516084 153 ntBASIC1.53□□□□□ -2.16
BEST1O76090 RNU6-1012P-201ENST00000516606 109 ntBASIC1.53□□□□□ -2.16
BEST1O76090 RNU2-12P-201ENST00000517216 168 ntBASIC1.53□□□□□ -2.16
BEST1O76090 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.53□□□□□ -2.16
BEST1O76090 AC091178.2-201ENST00000584401 117 ntBASIC1.53□□□□□ -2.16
BEST1O76090 AL078604.3-201ENST00000615580 211 ntBASIC1.53□□□□□ -2.16
BEST1O76090 AC138305.3-201ENST00000624988 240 ntBASIC1.53□□□□□ -2.16
BEST1O76090 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
BEST1O76090 Y_RNA.27-201ENST00000362540 103 ntBASIC1.52□□□□□ -2.17
BEST1O76090 Y_RNA.361-201ENST00000365515 120 ntBASIC1.52□□□□□ -2.17
BEST1O76090 RNU6-926P-201ENST00000384075 107 ntBASIC1.52□□□□□ -2.17
BEST1O76090 RNU6-997P-201ENST00000384725 107 ntBASIC1.52□□□□□ -2.17
BEST1O76090 MIR520G-201ENST00000385064 90 ntBASIC1.52□□□□□ -2.17
BEST1O76090 STAG3L5P-204ENST00000443759 179 ntBASIC1.52□□□□□ -2.17
BEST1O76090 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.52□□□□□ -2.17
BEST1O76090 SNORD19B-201ENST00000459623 84 ntBASIC1.52□□□□□ -2.17
BEST1O76090 AC091021.1-201ENST00000468051 388 ntBASIC1.52□□□□□ -2.17
BEST1O76090 AC023790.1-201ENST00000482174 347 ntBASIC1.52□□□□□ -2.17
BEST1O76090 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.52□□□□□ -2.17
BEST1O76090 RNU2-56P-201ENST00000516826 190 ntBASIC1.52□□□□□ -2.17
BEST1O76090 SNORD116.3-201ENST00000517176 78 ntBASIC1.52□□□□□ -2.17
BEST1O76090 SUMO2P16-201ENST00000519475 264 ntBASIC1.52□□□□□ -2.17
BEST1O76090 AC023442.1-201ENST00000531247 422 ntBASIC1.52□□□□□ -2.17
BEST1O76090 AP002004.2-201ENST00000531656 154 ntBASIC1.52□□□□□ -2.17
BEST1O76090 RAB11AP2-201ENST00000545905 639 ntBASIC1.52□□□□□ -2.17
BEST1O76090 VN1R91P-201ENST00000594377 169 ntBASIC1.52□□□□□ -2.17
BEST1O76090 AL365434.2-201ENST00000607979 234 ntBASIC1.52□□□□□ -2.17
BEST1O76090 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.52□□□□□ -2.17
BEST1O76090 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
BEST1O76090 Y_RNA.146-201ENST00000363549 102 ntBASIC1.51□□□□□ -2.17
BEST1O76090 RNY3P11-201ENST00000364153 102 ntBASIC1.51□□□□□ -2.17
BEST1O76090 Y_RNA.265-201ENST00000364677 108 ntBASIC1.51□□□□□ -2.17
BEST1O76090 RNU6-117P-201ENST00000365415 107 ntBASIC1.51□□□□□ -2.17
BEST1O76090 Y_RNA.356-201ENST00000365475 113 ntBASIC1.51□□□□□ -2.17
BEST1O76090 Y_RNA.463-201ENST00000384271 102 ntBASIC1.51□□□□□ -2.17
BEST1O76090 Y_RNA.529-201ENST00000384586 119 ntBASIC1.51□□□□□ -2.17
BEST1O76090 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms