Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 U2.11-201ENST00000616345 191 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 U2.2-201ENST00000616535 191 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 U2.3-201ENST00000617785 191 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 U2.19-201ENST00000618602 191 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 RNU2-1-201ENST00000618664 191 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 U2.6-201ENST00000619225 191 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 U2.5-201ENST00000619465 191 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 U2.10-201ENST00000620268 191 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 MIR7515-201ENST00000637837 67 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 AC134026.1-201ENST00000623249 2239 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
CDKL5O76039 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDKL5O76039 MIR449A-201ENST00000362113 91 ntBASIC2.61□□□□□ -1.99
CDKL5O76039 Y_RNA.124-201ENST00000363339 93 ntBASIC2.61□□□□□ -1.99
CDKL5O76039 RNU6-234P-201ENST00000365229 104 ntBASIC2.61□□□□□ -1.99
CDKL5O76039 SNORA72.4-201ENST00000384174 132 ntBASIC2.61□□□□□ -1.99
CDKL5O76039 MIR218-1-201ENST00000384999 110 ntBASIC2.61□□□□□ -1.99
CDKL5O76039 MIR1283-1-201ENST00000408494 87 ntBASIC2.61□□□□□ -1.99
CDKL5O76039 RNU6-855P-201ENST00000410395 104 ntBASIC2.61□□□□□ -1.99
CDKL5O76039 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.61□□□□□ -1.99
CDKL5O76039 RNU6-346P-201ENST00000516288 111 ntBASIC2.61□□□□□ -1.99
CDKL5O76039 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.61□□□□□ -1.99
CDKL5O76039 AC013791.1-201ENST00000616619 62 ntBASIC2.61□□□□□ -1.99
CDKL5O76039 AC009831.4-201ENST00000620744 325 ntBASIC2.61□□□□□ -1.99
CDKL5O76039 MIR6132-201ENST00000622083 109 ntBASIC2.61□□□□□ -1.99
CDKL5O76039 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.61□□□□□ -1.99
CDKL5O76039 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.6□□□□□ -1.99
CDKL5O76039 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CDKL5O76039 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CDKL5O76039 Y_RNA.7-201ENST00000362352 102 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 RNU4-10P-201ENST00000364383 140 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 Y_RNA.238-201ENST00000364441 102 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 Y_RNA.368-201ENST00000365547 113 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 Y_RNA.398-201ENST00000383952 99 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 RNU1-52P-201ENST00000384190 164 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 RNU6-1072P-201ENST00000384703 107 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 RNU6-443P-201ENST00000384780 107 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CDKL5O76039 MTCO2P33-201ENST00000402100 465 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 RNU6-710P-201ENST00000410424 105 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 AC090515.1-201ENST00000465295 476 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.6□□□□□ -1.99
CDKL5O76039 RNU7-200P-201ENST00000516105 62 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 RNU6-586P-201ENST00000517265 104 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 MIR3199-1-201ENST00000582434 88 ntBASIC2.6□□□□□ -1.99
CDKL5O76039 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDKL5O76039 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDKL5O76039 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CDKL5O76039 RNA5SP289-201ENST00000362332 137 ntBASIC2.59□□□□□ -1.99
CDKL5O76039 Y_RNA.172-201ENST00000363765 102 ntBASIC2.59□□□□□ -1.99
CDKL5O76039 Y_RNA.287-201ENST00000364853 94 ntBASIC2.59□□□□□ -1.99
CDKL5O76039 Y_RNA.310-201ENST00000365063 113 ntBASIC2.59□□□□□ -1.99
CDKL5O76039 Y_RNA.341-201ENST00000365341 102 ntBASIC2.59□□□□□ -1.99
CDKL5O76039 Y_RNA.412-201ENST00000384001 104 ntBASIC2.59□□□□□ -1.99
CDKL5O76039 SNORA6-201ENST00000384033 151 ntBASIC2.59□□□□□ -1.99
CDKL5O76039 SNORD14D-201ENST00000384390 87 ntBASIC2.59□□□□□ -1.99
CDKL5O76039 AL355796.1-201ENST00000406706 323 ntBASIC2.59□□□□□ -1.99
CDKL5O76039 MICF-203ENST00000432679 129 ntBASIC2.59□□□□□ -1.99
CDKL5O76039 RNU7-57P-201ENST00000459540 60 ntBASIC2.59□□□□□ -1.99
CDKL5O76039 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.59□□□□□ -1.99
CDKL5O76039 RNA5SP200-201ENST00000516360 103 ntBASIC2.59□□□□□ -1.99
CDKL5O76039 AC105245.1-201ENST00000581934 244 ntBASIC2.59□□□□□ -1.99
CDKL5O76039 AC025754.2-201ENST00000606491 432 ntBASIC2.59□□□□□ -1.99
CDKL5O76039 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CDKL5O76039 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.59□□□□□ -2
CDKL5O76039 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.58□□□□□ -2
CDKL5O76039 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.58□□□□□ -2
CDKL5O76039 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CDKL5O76039 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CDKL5O76039 RNY1P5-201ENST00000383890 115 ntBASIC2.58□□□□□ -2
CDKL5O76039 Y_RNA.441-201ENST00000384123 112 ntBASIC2.58□□□□□ -2
CDKL5O76039 Y_RNA.456-201ENST00000384232 111 ntBASIC2.58□□□□□ -2
CDKL5O76039 MIR221-201ENST00000385135 110 ntBASIC2.58□□□□□ -2
CDKL5O76039 SNORA40.19-201ENST00000390846 128 ntBASIC2.58□□□□□ -2
CDKL5O76039 SNORA48.3-201ENST00000391081 134 ntBASIC2.58□□□□□ -2
CDKL5O76039 RNU6-381P-201ENST00000391259 108 ntBASIC2.58□□□□□ -2
CDKL5O76039 MIR300-201ENST00000401138 83 ntBASIC2.58□□□□□ -2
CDKL5O76039 AC016717.1-201ENST00000448918 286 ntBASIC2.58□□□□□ -2
CDKL5O76039 RNU6-965P-201ENST00000516721 96 ntBASIC2.58□□□□□ -2
CDKL5O76039 SCARNA3-201ENST00000517097 143 ntBASIC2.58□□□□□ -2
CDKL5O76039 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
CDKL5O76039 MIR4753-201ENST00000585119 83 ntBASIC2.58□□□□□ -2
CDKL5O76039 AL356280.1-201ENST00000603614 379 ntBASIC2.58□□□□□ -2
CDKL5O76039 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.58□□□□□ -2
CDKL5O76039 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.57□□□□□ -2
CDKL5O76039 Y_RNA.182-201ENST00000363880 111 ntBASIC2.57□□□□□ -2
CDKL5O76039 Y_RNA.293-201ENST00000364908 93 ntBASIC2.57□□□□□ -2
CDKL5O76039 Y_RNA.572-201ENST00000384757 98 ntBASIC2.57□□□□□ -2
CDKL5O76039 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.57□□□□□ -2
CDKL5O76039 RNU4-53P-201ENST00000410828 140 ntBASIC2.57□□□□□ -2
CDKL5O76039 RNU7-141P-201ENST00000459304 62 ntBASIC2.57□□□□□ -2
CDKL5O76039 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.57□□□□□ -2
CDKL5O76039 SNORA70.12-201ENST00000516084 153 ntBASIC2.57□□□□□ -2
CDKL5O76039 AC018630.3-201ENST00000542637 96 ntBASIC2.57□□□□□ -2
CDKL5O76039 AC108706.1-201ENST00000611053 297 ntBASIC2.57□□□□□ -2
CDKL5O76039 AC245884.12-201ENST00000615364 59 ntBASIC2.57□□□□□ -2
CDKL5O76039 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.57□□□□□ -2
CDKL5O76039 snoZ196.1-201ENST00000625269 89 ntBASIC2.57□□□□□ -2
CDKL5O76039 AC080128.1-201ENST00000474389 1917 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms