Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 Y_RNA.796-201ENST00000364268 102 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 Y_RNA.799-201ENST00000364992 102 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 Y_RNA.557-201ENST00000384680 107 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 RNU6-376P-201ENST00000384731 106 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 RNU6-510P-201ENST00000391239 108 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 ELOCP21-201ENST00000412558 336 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.91□□□□□ -2.26
UPK3AO75631 AC018865.2-201ENST00000423631 129 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 CALM2P4-201ENST00000430810 426 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.91□□□□□ -2.26
UPK3AO75631 RNA5SP20-201ENST00000515976 84 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 SNORA31.2-201ENST00000516019 134 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 RNA5SP168-201ENST00000516642 112 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 RNA5SP102-201ENST00000516865 106 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 AC022868.1-201ENST00000517767 391 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.91□□□□□ -2.26
UPK3AO75631 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.91□□□□□ -2.26
UPK3AO75631 MIR4452-201ENST00000583004 71 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 AC104260.1-201ENST00000616660 539 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.91□□□□□ -2.26
UPK3AO75631 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
UPK3AO75631 AC027514.1-201ENST00000588561 1603 ntBASIC0.9□□□□□ -2.26
UPK3AO75631 Y_RNA.498-201ENST00000384460 102 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 RNU6-601P-201ENST00000384540 107 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 MIR19B1-201ENST00000384829 87 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 SNORD12-201ENST00000391002 90 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 MTCYBP4-201ENST00000401524 249 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 MIR548K-201ENST00000408406 116 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 MTCYBP10-201ENST00000424905 650 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 AC092423.1-201ENST00000430165 186 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 U8.22-201ENST00000459141 133 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 snoU13.18-201ENST00000459483 104 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 RPL7P42-201ENST00000481005 679 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 Y_RNA.708-201ENST00000516950 96 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 AC105029.1-201ENST00000520250 669 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK3AO75631 AL078603.1-201ENST00000603824 313 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 AC009229.3-201ENST00000608056 282 ntBASIC0.9□□□□□ -2.27
UPK3AO75631 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
UPK3AO75631 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
UPK3AO75631 Y_RNA.6-201ENST00000362350 114 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 SNORA27.1-201ENST00000362604 124 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 RNU4-79P-201ENST00000362764 141 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 Y_RNA.118-201ENST00000363300 101 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 RNU6-593P-201ENST00000364716 112 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 SNORA22-201ENST00000383907 134 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 RNU6-1145P-201ENST00000384246 107 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 SNORA22C-201ENST00000384614 134 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 U8.16-201ENST00000391279 133 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 MTND3P8-201ENST00000412909 339 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 POLR2J4-204ENST00000418424 324 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 UBE2V1P7-201ENST00000446395 340 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 AC107399.1-201ENST00000451226 265 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 AC105758.1-201ENST00000506038 399 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.89□□□□□ -2.27
UPK3AO75631 AC011352.1-201ENST00000512300 793 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 RNU6-322P-201ENST00000516010 103 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 RNU6-947P-201ENST00000516264 106 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 AC018448.1-201ENST00000552843 316 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 MIR3684-201ENST00000579779 74 ntBASIC0.89□□□□□ -2.27
UPK3AO75631 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
UPK3AO75631 SNORA1B-201ENST00000362535 133 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 SNORD114-27-201ENST00000363766 70 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 RNU4-38P-201ENST00000364472 129 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 Y_RNA.358-201ENST00000365491 99 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.88□□□□□ -2.27
UPK3AO75631 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
UPK3AO75631 RNU6-424P-201ENST00000384367 105 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 MIR562-201ENST00000384894 95 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 RNU6-910P-201ENST00000390844 107 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 RNU6-1054P-201ENST00000411293 104 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.88□□□□□ -2.27
UPK3AO75631 AC063976.4-201ENST00000421971 163 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.88□□□□□ -2.27
UPK3AO75631 PCNPP5-201ENST00000452246 481 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 AC093850.1-201ENST00000454121 251 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 RNU6-625P-201ENST00000459412 107 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.88□□□□□ -2.27
UPK3AO75631 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.88□□□□□ -2.27
UPK3AO75631 AC074133.1-201ENST00000515696 183 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 RNA5SP220-201ENST00000516298 104 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 RNU6-1291P-201ENST00000516591 104 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 RNU6-341P-201ENST00000516973 96 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 AF235103.2-201ENST00000525753 346 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.88□□□□□ -2.27
UPK3AO75631 AC136443.5-201ENST00000603741 370 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 AC002553.4-201ENST00000616896 331 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 AC073869.6-201ENST00000640656 341 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 AC005592.1-201ENST00000566527 1640 ntBASIC0.88□□□□□ -2.27
UPK3AO75631 Y_RNA.355-201ENST00000365462 98 ntBASIC0.87□□□□□ -2.27
UPK3AO75631 RNU6-42P-201ENST00000384165 107 ntBASIC0.87□□□□□ -2.27
UPK3AO75631 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.87□□□□□ -2.27
UPK3AO75631 RPL23AP50-201ENST00000434149 455 ntBASIC0.87□□□□□ -2.27
UPK3AO75631 MTND3P10-201ENST00000450967 341 ntBASIC0.87□□□□□ -2.27
UPK3AO75631 AC048334.1-201ENST00000477975 159 ntBASIC0.87□□□□□ -2.27
UPK3AO75631 OR9P1P-201ENST00000496431 281 ntBASIC0.87□□□□□ -2.27
UPK3AO75631 Y_RNA.655-201ENST00000515919 96 ntBASIC0.87□□□□□ -2.27
UPK3AO75631 RNU7-12P-201ENST00000516030 62 ntBASIC0.87□□□□□ -2.27
UPK3AO75631 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms